Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:07:17 (4180976): wrapper (7.7.26015): starting
17:07:17 (4180976): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 17:07:17] Arguments: --nthreads 12
[2025-07-27 17:07:17] Threads: 12
[2025-07-27 17:07:17] Checking for CVMFS
[2025-07-27 17:07:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:07:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:07:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:07:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:07:18] 2.12.6.0 418423 18884 329712 148823 3 397 25451289 32935937 7894 16776704 0 33605202 99.646 54753569 33158 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 17:07:18] CVMFS is ok
[2025-07-27 17:07:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:07:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:07:18] Further information can be found at the LHC@home message board.
[2025-07-27 17:07:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:07:18] Checking for apptainer binary...
[2025-07-27 17:07:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:07:18] Running /usr/bin/apptainer --version
[2025-07-27 17:07:18] apptainer version 1.4.1-1.el9
[2025-07-27 17:07:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:07:18] c6-1-26-2.aglt2.org
[2025-07-27 17:07:18] apptainer works
[2025-07-27 17:07:18] Set ATHENA_PROC_NUMBER=12
[2025-07-27 17:07:18] Set ATHENA_CORE_NUMBER=12
[2025-07-27 17:07:18] Starting ATLAS job with PandaID=6747577603
[2025-07-27 17:07:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:15:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:15:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 18:15:13]  is_altstaged=None
[2025-07-27 18:15:13]  is_tar=False
[2025-07-27 18:15:13]  lfn=log.45743349._053118.job.log.tgz.1
[2025-07-27 18:15:13]  mtime=0
[2025-07-27 18:15:13]  protocol_id=None
[2025-07-27 18:15:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:15:13]  replicas=None
[2025-07-27 18:15:13]  scope=mc23_13p6TeV
[2025-07-27 18:15:13]  status=None
[2025-07-27 18:15:13]  status_code=0
[2025-07-27 18:15:13]  storage_token=
[2025-07-27 18:15:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747577603/log.45743349._053118.job.log.tgz.1
[2025-07-27 18:15:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/55/log.45743349._053118.job.log.tgz.1
[2025-07-27 18:15:13]  workdir=None
[2025-07-27 18:15:13] ]
[2025-07-27 18:15:13] 2025-07-27 22:14:36,108 | INFO     | transferring file log.45743349._053118.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747577603/log.45743349._053118.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:15:13] 2025-07-27 22:14:36,108 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747577603/log.45743349._053118.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053118.job
[2025-07-27 18:15:13] 2025-07-27 22:14:36,127 | INFO     | adding to output.list: log.45743349._053118.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/55/log.45743349._053118.job.log.tg
[2025-07-27 18:15:13] 2025-07-27 22:14:36,128 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:15:13] 2025-07-27 22:14:36,128 | INFO     | summary of transferred files:
[2025-07-27 18:15:13] 2025-07-27 22:14:36,128 | INFO     |  -- lfn=log.45743349._053118.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:15:13] 2025-07-27 22:14:36,129 | INFO     | stage-out finished correctly
[2025-07-27 18:15:13] 2025-07-27 22:14:36,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:15:13] 2025-07-27 22:14:36,323 | INFO     | job 6747577603 has state=finished
[2025-07-27 18:15:13] 2025-07-27 22:14:36,324 | INFO     | preparing for final server update for job 6747577603 in state='finished'
[2025-07-27 18:15:13] 2025-07-27 22:14:36,324 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:15:13] 2025-07-27 22:14:36,324 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:15:13] 2025-07-27 22:14:36,324 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:15:13] 2025-07-27 22:14:36,324 | INFO     | job 6747577603 has finished - writing final server update
[2025-07-27 18:15:13] 2025-07-27 22:14:36,325 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:15:13] 2025-07-27 22:14:36,325 | INFO     | executing command: lscpu
[2025-07-27 18:15:13] 2025-07-27 22:14:36,388 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:15:13] 2025-07-27 22:14:37,434 | INFO     | monitor loop #302: job 0:6747577603 is in state 'finished'
[2025-07-27 18:15:13] 2025-07-27 22:14:37,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:13] 2025-07-27 22:14:39,937 | INFO     | monitor loop #303: job 0:6747577603 is in state 'finished'
[2025-07-27 18:15:13] 2025-07-27 22:14:39,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,793 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 18:15:13] 2025-07-27 22:14:40,797 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2689.067428571428
[2025-07-27 18:15:13] 2025-07-27 22:14:40,805 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747577603/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,806 | INFO     | extracted standard info from prmon json
[2025-07-27 18:15:13] 2025-07-27 22:14:40,806 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:15:13] 2025-07-27 22:14:40,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:15:13] 2025-07-27 22:14:40,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:15:13] 2025-07-27 22:14:40,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:15:13] 2025-07-27 22:14:40,807 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | sum of square deviations: 63666310.0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | sum of deviations: 1694725606.9999995
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | mean x: 1753652554.0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | mean y: 2385704.254237288
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | -- intersect: -46677874060.20753
[2025-07-27 18:15:13] 2025-07-27 22:14:40,808 | INFO     | intersect: -46677874060.20753
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | chi2: 0.02098854110758633
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | -- intersect: -46677874060.20753
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | current memory leak: 26.62 B/s (using 59 data points, chi2=0.02)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | could have reported an average CPU frequency of 2710 MHz (6 samples)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | ..............................
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | . Timing measurements:
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | . get job = 0 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,809 | INFO     | . initial setup = 2 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | . payload setup = 8 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | . stage-in = 0 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | . payload execution = 3996 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | . stage-out = 0 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | . log creation = 0 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,810 | INFO     | ..............................
[2025-07-27 18:15:13] 2025-07-27 22:14:40,889 | INFO     | 
[2025-07-27 18:15:13] 2025-07-27 22:14:40,889 | INFO     | job summary report
[2025-07-27 18:15:13] 2025-07-27 22:14:40,889 | INFO     | --------------------------------------------------
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | PanDA job id: 6747577603
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | task id: 45743349
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | errors: (none)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | pilot state: finished 
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | transexitcode: 0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | exeerrorcode: 0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | exeerrordiag: 
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | exitcode: 0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | exitmsg: OK
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | cpuconsumptiontime: 41584 s
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | nevents: 400
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | neventsw: 0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | pid: 4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | pgrp: 4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | corecount: 12
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | event service: False
[2025-07-27 18:15:13] 2025-07-27 22:14:40,890 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 4008: 2423576, 4009: 2432758, 4014: 2432896}
[2025-07-27 18:15:13] 2025-07-27 22:14:40,891 | INFO     | --------------------------------------------------
[2025-07-27 18:15:13] 2025-07-27 22:14:40,891 | INFO     | 
[2025-07-27 18:15:13] 2025-07-27 22:14:40,891 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:15:13] 2025-07-27 22:14:40,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | job 6747577603 has completed (purged errors)
[2025-07-27 18:15:13] 2025-07-27 22:14:40,910 | INFO     | overall cleanup function is called
[2025-07-27 18:15:13] 2025-07-27 22:14:41,917 | INFO     | --- collectZombieJob: --- 10, [4193279]
[2025-07-27 18:15:13] 2025-07-27 22:14:41,917 | INFO     | zombie collector waiting for pid 4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:41,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:15:13] 2025-07-27 22:14:41,917 | INFO     | collected zombie processes
[2025-07-27 18:15:13] 2025-07-27 22:14:41,917 | INFO     | will attempt to kill all subprocesses of pid=4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:42,179 | INFO     | process IDs to be killed: [4193279] (in reverse order)
[2025-07-27 18:15:13] 2025-07-27 22:14:42,266 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:15:13] 2025-07-27 22:14:42,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:15:13] 2025-07-27 22:14:42,276 | INFO     | did not find any defunct processes belonging to 4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:42,287 | INFO     | did not find any defunct processes belonging to 4193279
[2025-07-27 18:15:13] 2025-07-27 22:14:42,287 | INFO     | ready for new job
[2025-07-27 18:15:13] 2025-07-27 22:14:42,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:15:13] 2025-07-27 22:14:42,289 | INFO     | ***************************************
[2025-07-27 18:15:13] 2025-07-27 22:14:42,289 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:15:13] 2025-07-27 22:14:42,289 | INFO     | ***************************************
[2025-07-27 18:15:13] 2025-07-27 22:14:42,289 | INFO     | 
[2025-07-27 18:15:13] 2025-07-27 22:14:42,305 | INFO     | architecture information:
[2025-07-27 18:15:13] 2025-07-27 22:14:42,305 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:15:13] 2025-07-27 22:14:42,321 | INFO     | cat /etc/os-release:
[2025-07-27 18:15:13] NAME="CentOS Linux"
[2025-07-27 18:15:13] VERSION="7 (Core)"
[2025-07-27 18:15:13] ID="centos"
[2025-07-27 18:15:13] ID_LIKE="rhel fedora"
[2025-07-27 18:15:13] VERSION_ID="7"
[2025-07-27 18:15:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:15:13] ANSI_COLOR="0;31"
[2025-07-27 18:15:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:15:13] HOME_URL="https://www.centos.org/"
[2025-07-27 18:15:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:15:13] 
[2025-07-27 18:15:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:15:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:15:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:15:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:15:13] 
[2025-07-27 18:15:13] 2025-07-27 22:14:42,322 | INFO     | ***************************************
[2025-07-27 18:15:13] 2025-07-27 22:14:42,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:15:13] 2025-07-27 22:14:42,840 | INFO     | sufficient remaining disk space (76457967616 B)
[2025-07-27 18:15:13] 2025-07-27 22:14:42,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:15:13] 2025-07-27 22:14:42,841 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:15:13] 2025-07-27 22:14:42,841 | INFO     | update_server=False
[2025-07-27 18:15:13] 2025-07-27 22:14:42,841 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:15:13] 2025-07-27 22:14:42,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:15:13] 2025-07-27 22:14:42,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:15:13] 2025-07-27 22:14:42,928 | INFO     | all payload control threads have been joined
[2025-07-27 18:15:13] 2025-07-27 22:14:43,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:15:13] 2025-07-27 22:14:43,446 | INFO     | aborting loop
[2025-07-27 18:15:13] 2025-07-27 22:14:43,846 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:43,847 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:43,933 | INFO     | [payload] control thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:43,934 | INFO     | all data control threads have been joined
[2025-07-27 18:15:13] 2025-07-27 22:14:43,939 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,150 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:15:13] 2025-07-27 22:14:44,298 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,327 | INFO     | all job control threads have been joined
[2025-07-27 18:15:13] 2025-07-27 22:14:44,451 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,632 | INFO     | [job] validate thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,860 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:44,939 | INFO     | [data] control thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:45,109 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:45,220 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:45,299 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:45,332 | INFO     | [job] control thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:46,220 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:46,847 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:15:13] 2025-07-27 22:14:47,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048794883904)>', '<ExcThread(monitor, started 140047961528064)>']
[2025-07-27 18:15:13] 2025-07-27 22:14:52,895 | INFO     | all workflow threads have been joined
[2025-07-27 18:15:13] 2025-07-27 22:14:52,895 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:15:13] 2025-07-27 22:14:52,896 | INFO     | traces error code: 0
[2025-07-27 18:15:13] 2025-07-27 22:14:52,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:15:13] 2025-07-27 22:15:13,345 | INFO     | PID=4186396 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:15:13] 2025-07-27 22:15:13,347 | INFO     | .. there are 20 such processes running
[2025-07-27 18:15:13] 2025-07-27 22:15:13,349 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:15:13] 2025-07-27 22:15:13,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:15:13] 2025-07-27 22:15:13,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:15:13] 2025-07-27 22:15:13,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:15:13] 2025-07-27 22:15:13,349 | INFO     | [monitor] control thread has ended
[2025-07-27 18:15:13] 2025-07-27 22:15:13,560 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:15:13] 2025-07-27 22:15:13,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:15:13] 2025-07-27 22:15:13,566 [wrapper] pilotpid: 4186396
[2025-07-27 18:15:13] 2025-07-27 22:15:13,570 [wrapper] Pilot exit status: 0
[2025-07-27 18:15:13] 2025-07-27 22:15:13,580 [wrapper] pandaids: 6747577603
[2025-07-27 18:15:13] 2025-07-27 22:15:13,644 [wrapper] cleanup supervisor_pilot  187783 4186397
[2025-07-27 18:15:13] 2025-07-27 22:15:13,649 [wrapper] Test setup, not cleaning
[2025-07-27 18:15:13] 2025-07-27 22:15:13,652 [wrapper] apfmon messages muted
[2025-07-27 18:15:13] 2025-07-27 22:15:13,655 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:15:13] 2025-07-27 22:15:13,658 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:15:13]  *** Error codes and diagnostics ***
[2025-07-27 18:15:13]     "exeErrorCode": 0,
[2025-07-27 18:15:13]     "exeErrorDiag": "",
[2025-07-27 18:15:13]     "pilotErrorCode": 0,
[2025-07-27 18:15:13]     "pilotErrorDiag": "",
[2025-07-27 18:15:13]  *** Listing of results directory ***
[2025-07-27 18:15:13] total 345224
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:39 queuedata.json
[2025-07-27 18:15:13] -rwx------. 1 boincer umatlas     36292 Jul 27 13:40 runpilot2-wrapper.sh
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas       100 Jul 27 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:15:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 17:07 run_atlas
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas       105 Jul 27 17:07 job.xml
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas 143574373 Jul 27 17:07 EVNT.45743347._002904.pool.root.1
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:07 start_atlas.sh
[2025-07-27 18:15:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 17:07 shared
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 17:07 input.tar.gz
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas         0 Jul 27 17:07 boinc_lockfile
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 17:07 pandaJob.out
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas    980109 Jul 27 17:07 agis_schedconf.cvmfs.json
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:07 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:15:13] drwx------. 4 boincer umatlas      4096 Jul 27 17:07 pilot3
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 18:13 init_data.xml
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas 204544733 Jul 27 18:14 HITS.45743349._053118.pool.root.1
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:14 boinc_task_state.xml
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas      1035 Jul 27 18:14 memory_monitor_summary.json
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas    351688 Jul 27 18:14 log.45743349._053118.job.log.tgz.1
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas      7819 Jul 27 18:14 heartbeat.json
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:15 boinc_mmap_file
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:15 wrapper_checkpoint.txt
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas        95 Jul 27 18:15 pilot_heartbeat.json
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas       823 Jul 27 18:15 pilotlog.txt
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas    408739 Jul 27 18:15 log.45743349._053118.job.log.1
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas       357 Jul 27 18:15 output.list
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:15 runtime_log
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas    778240 Jul 27 18:15 result.tar.gz
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 18:15 runtime_log.err
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas       655 Jul 27 18:15 NB6MDmoXK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj0VLDmfDGTim.diag
[2025-07-27 18:15:13] -rw-r--r--. 1 boincer umatlas     21463 Jul 27 18:15 stderr.txt
[2025-07-27 18:15:13] HITS file was successfully produced:
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas 204544733 Jul 27 18:14 shared/HITS.pool.root.1
[2025-07-27 18:15:13]  *** Contents of shared directory: ***
[2025-07-27 18:15:13] total 341276
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas 143574373 Jul 27 17:07 ATLAS.root_0
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 17:07 start_atlas.sh
[2025-07-27 18:15:13] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 17:07 input.tar.gz
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas 204544733 Jul 27 18:14 HITS.pool.root.1
[2025-07-27 18:15:13] -rw-------. 1 boincer umatlas    778240 Jul 27 18:15 result.tar.gz
18:15:15 (4180976): run_atlas exited; CPU time 41668.570824
18:15:15 (4180976): called boinc_finish(0)

</stderr_txt>
]]>

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