Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:27 (3616495): wrapper (7.7.26015): starting
16:30:27 (3616495): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:30:27] Arguments: --nthreads 8
[2025-07-27 16:30:27] Threads: 8
[2025-07-27 16:30:27] Checking for CVMFS
[2025-07-27 16:30:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:30:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:30:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:30:27] 2.13.0.0 1483043 18862 264700 148823 3 226 33049826 40960001 17408 16776704 0 85048847 99.680 98886566 18861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 16:30:27] CVMFS is ok
[2025-07-27 16:30:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:30:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:30:27] Further information can be found at the LHC@home message board.
[2025-07-27 16:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:30:27] Checking for apptainer binary...
[2025-07-27 16:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:30:27] Running /usr/bin/apptainer --version
[2025-07-27 16:30:27] apptainer version 1.4.1-1.el9
[2025-07-27 16:30:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:30:27] c7-4-30.aglt2.org
[2025-07-27 16:30:27] apptainer works
[2025-07-27 16:30:27] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:30:27] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:30:27] Starting ATLAS job with PandaID=6746563258
[2025-07-27 16:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:12:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:12:25]  protocol_id=None
[2025-07-27 18:12:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:12:25]  replicas=None
[2025-07-27 18:12:25]  scope=mc23_13p6TeV
[2025-07-27 18:12:25]  status=None
[2025-07-27 18:12:25]  status_code=0
[2025-07-27 18:12:25]  storage_token=
[2025-07-27 18:12:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746563258/log.45758991._000103.job.log.tgz.1
[2025-07-27 18:12:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/f4/log.45758991._000103.job.log.tgz.1
[2025-07-27 18:12:25]  workdir=None
[2025-07-27 18:12:25] ]
[2025-07-27 18:12:25] 2025-07-27 22:11:45,773 | INFO     | transferring file log.45758991._000103.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746563258/log.45758991._000103.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 18:12:25] 2025-07-27 22:11:45,773 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746563258/log.45758991._000103.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758991._000103.job
[2025-07-27 18:12:25] 2025-07-27 22:11:45,795 | INFO     | adding to output.list: log.45758991._000103.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/f4/log.45758991._000103.job.log.tg
[2025-07-27 18:12:25] 2025-07-27 22:11:45,796 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:12:25] 2025-07-27 22:11:45,796 | INFO     | summary of transferred files:
[2025-07-27 18:12:25] 2025-07-27 22:11:45,796 | INFO     |  -- lfn=log.45758991._000103.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:12:25] 2025-07-27 22:11:45,797 | INFO     | stage-out finished correctly
[2025-07-27 18:12:25] 2025-07-27 22:11:46,504 | INFO     | monitor loop #437: job 0:6746563258 is in state 'finished'
[2025-07-27 18:12:25] 2025-07-27 22:11:46,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:12:25] 2025-07-27 22:11:46,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:12:25] 2025-07-27 22:11:46,679 | INFO     | job 6746563258 has state=finished
[2025-07-27 18:12:25] 2025-07-27 22:11:46,679 | INFO     | preparing for final server update for job 6746563258 in state='finished'
[2025-07-27 18:12:25] 2025-07-27 22:11:46,680 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:12:25] 2025-07-27 22:11:46,680 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:12:25] 2025-07-27 22:11:46,680 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:12:25] 2025-07-27 22:11:46,680 | INFO     | job 6746563258 has finished - writing final server update
[2025-07-27 18:12:25] 2025-07-27 22:11:46,680 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:12:25] 2025-07-27 22:11:46,681 | INFO     | executing command: lscpu
[2025-07-27 18:12:25] 2025-07-27 22:11:46,755 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:12:25] 2025-07-27 22:11:48,648 | INFO     | PID=3621468 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 18:12:25] 2025-07-27 22:11:48,648 | INFO     | .. there are 35 such processes running
[2025-07-27 18:12:25] 2025-07-27 22:11:49,008 | INFO     | monitor loop #438: job 0:6746563258 is in state 'finished'
[2025-07-27 18:12:25] 2025-07-27 22:11:49,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:12:25] 2025-07-27 22:11:51,511 | INFO     | monitor loop #439: job 0:6746563258 is in state 'finished'
[2025-07-27 18:12:25] 2025-07-27 22:11:51,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,222 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:12:25] 2025-07-27 22:11:52,229 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3038.2524375000007
[2025-07-27 18:12:25] 2025-07-27 22:11:52,244 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746563258/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,245 | INFO     | extracted standard info from prmon json
[2025-07-27 18:12:25] 2025-07-27 22:11:52,245 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:12:25] 2025-07-27 22:11:52,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:12:25] 2025-07-27 22:11:52,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:12:25] 2025-07-27 22:11:52,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:12:25] 2025-07-27 22:11:52,248 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:12:25] 2025-07-27 22:11:52,248 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | sum of deviations: -24595963811.5
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | mean x: 1753651353.5
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | mean y: 2355205.467391304
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | -- intersect: 178657903433.5447
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | intersect: 178657903433.5447
[2025-07-27 18:12:25] 2025-07-27 22:11:52,249 | INFO     | chi2: 0.2108847159618494
[2025-07-27 18:12:25] 2025-07-27 22:11:52,250 | INFO     | -- intersect: 178657903433.5447
[2025-07-27 18:12:25] 2025-07-27 22:11:52,250 | INFO     | current memory leak: -101.88 B/s (using 92 data points, chi2=0.21)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,250 | INFO     | could have reported an average CPU frequency of 3037 MHz (7 samples)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,250 | INFO     | ..............................
[2025-07-27 18:12:25] 2025-07-27 22:11:52,250 | INFO     | . Timing measurements:
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . get job = 0 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . initial setup = 2 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . payload setup = 8 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . stage-in = 0 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . payload execution = 6034 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . stage-out = 0 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | . log creation = 0 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,251 | INFO     | ..............................
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | 
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | job summary report
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | --------------------------------------------------
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | PanDA job id: 6746563258
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | task id: 45758991
[2025-07-27 18:12:25] 2025-07-27 22:11:52,633 | INFO     | errors: (none)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | pilot state: finished 
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | transexitcode: 0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | exeerrorcode: 0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | exeerrordiag: 
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | exitcode: 0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | exitmsg: OK
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | cpuconsumptiontime: 45090 s
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | nevents: 400
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | neventsw: 0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | pid: 3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | pgrp: 3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | corecount: 8
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | event service: False
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | sizes: {0: 2396642, 1: 2397498, 7: 2397760, 12: 2397788, 6047: 2424356, 6048: 2433354, 6049: 2433538, 6054: 2433732}
[2025-07-27 18:12:25] 2025-07-27 22:11:52,634 | INFO     | --------------------------------------------------
[2025-07-27 18:12:25] 2025-07-27 22:11:52,635 | INFO     | 
[2025-07-27 18:12:25] 2025-07-27 22:11:52,635 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:12:25] 2025-07-27 22:11:52,661 | INFO     | job 6746563258 has completed (purged errors)
[2025-07-27 18:12:25] 2025-07-27 22:11:52,661 | INFO     | overall cleanup function is called
[2025-07-27 18:12:25] 2025-07-27 22:11:53,668 | INFO     | --- collectZombieJob: --- 10, [3630772]
[2025-07-27 18:12:25] 2025-07-27 22:11:53,668 | INFO     | zombie collector waiting for pid 3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:53,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:12:25] 2025-07-27 22:11:53,668 | INFO     | collected zombie processes
[2025-07-27 18:12:25] 2025-07-27 22:11:53,668 | INFO     | will attempt to kill all subprocesses of pid=3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:54,130 | INFO     | process IDs to be killed: [3630772] (in reverse order)
[2025-07-27 18:12:25] 2025-07-27 22:11:54,283 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:12:25] 2025-07-27 22:11:54,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:12:25] 2025-07-27 22:11:54,303 | INFO     | did not find any defunct processes belonging to 3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:54,322 | INFO     | did not find any defunct processes belonging to 3630772
[2025-07-27 18:12:25] 2025-07-27 22:11:54,322 | INFO     | ready for new job
[2025-07-27 18:12:25] 2025-07-27 22:11:54,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:12:25] 2025-07-27 22:11:54,324 | INFO     | ***************************************
[2025-07-27 18:12:25] 2025-07-27 22:11:54,324 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:12:25] 2025-07-27 22:11:54,324 | INFO     | ***************************************
[2025-07-27 18:12:25] 2025-07-27 22:11:54,324 | INFO     | 
[2025-07-27 18:12:25] 2025-07-27 22:11:54,341 | INFO     | architecture information:
[2025-07-27 18:12:25] 2025-07-27 22:11:54,341 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:12:25] 2025-07-27 22:11:54,361 | INFO     | cat /etc/os-release:
[2025-07-27 18:12:25] NAME="CentOS Linux"
[2025-07-27 18:12:25] VERSION="7 (Core)"
[2025-07-27 18:12:25] ID="centos"
[2025-07-27 18:12:25] ID_LIKE="rhel fedora"
[2025-07-27 18:12:25] VERSION_ID="7"
[2025-07-27 18:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:12:25] ANSI_COLOR="0;31"
[2025-07-27 18:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:12:25] HOME_URL="https://www.centos.org/"
[2025-07-27 18:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:12:25] 
[2025-07-27 18:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:12:25] 
[2025-07-27 18:12:25] 2025-07-27 22:11:54,361 | INFO     | ***************************************
[2025-07-27 18:12:25] 2025-07-27 22:11:54,864 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:12:25] 2025-07-27 22:11:54,882 | INFO     | sufficient remaining disk space (128641400832 B)
[2025-07-27 18:12:25] 2025-07-27 22:11:54,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:12:25] 2025-07-27 22:11:54,882 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:12:25] 2025-07-27 22:11:54,883 | INFO     | update_server=False
[2025-07-27 18:12:25] 2025-07-27 22:11:54,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:12:25] 2025-07-27 22:11:54,928 | INFO     | all payload control threads have been joined
[2025-07-27 18:12:25] 2025-07-27 22:11:55,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:12:25] 2025-07-27 22:11:55,016 | INFO     | aborting loop
[2025-07-27 18:12:25] 2025-07-27 22:11:55,847 | INFO     | all data control threads have been joined
[2025-07-27 18:12:25] 2025-07-27 22:11:55,888 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:55,933 | INFO     | [payload] control thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,021 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,122 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:12:25] 2025-07-27 22:11:56,473 | INFO     | all job control threads have been joined
[2025-07-27 18:12:25] 2025-07-27 22:11:56,579 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,785 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,852 | INFO     | [data] control thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:56,918 | INFO     | [job] validate thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:57,054 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:57,078 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:57,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:12:25] 2025-07-27 22:11:57,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:12:25] 2025-07-27 22:11:57,360 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:57,479 | INFO     | [job] control thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:58,358 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:11:58,388 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:12:01,196 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:12:04,994 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:12:25] 2025-07-27 22:12:05,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:12:25] 2025-07-27 22:12:07,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053841663808)>', '<ExcThread(monitor, started 140053355415296)>']
[2025-07-27 18:12:25] 2025-07-27 22:12:12,912 | INFO     | all workflow threads have been joined
[2025-07-27 18:12:25] 2025-07-27 22:12:12,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:12:25] 2025-07-27 22:12:12,912 | INFO     | traces error code: 0
[2025-07-27 18:12:25] 2025-07-27 22:12:12,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:12:25] 2025-07-27 22:12:25,365 | INFO     | PID=3621468 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:12:25] 2025-07-27 22:12:25,365 | INFO     | .. there are 34 such processes running
[2025-07-27 18:12:25] 2025-07-27 22:12:25,366 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:12:25] 2025-07-27 22:12:25,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:12:25] 2025-07-27 22:12:25,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:12:25] 2025-07-27 22:12:25,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:12:25] 2025-07-27 22:12:25,366 | INFO     | [monitor] control thread has ended
[2025-07-27 18:12:25] 2025-07-27 22:12:25,483 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:12:25] 2025-07-27 22:12:25,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:12:25] 2025-07-27 22:12:25,491 [wrapper] pilotpid: 3621468
[2025-07-27 18:12:25] 2025-07-27 22:12:25,494 [wrapper] Pilot exit status: 0
[2025-07-27 18:12:25] 2025-07-27 22:12:25,508 [wrapper] pandaids: 6746563258
[2025-07-27 18:12:25] 2025-07-27 22:12:25,628 [wrapper] cleanup supervisor_pilot 3894337 3621469
[2025-07-27 18:12:25] 2025-07-27 22:12:25,632 [wrapper] Test setup, not cleaning
[2025-07-27 18:12:25] 2025-07-27 22:12:25,636 [wrapper] apfmon messages muted
[2025-07-27 18:12:25] 2025-07-27 22:12:25,639 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:12:25] 2025-07-27 22:12:25,643 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:12:25]  *** Error codes and diagnostics ***
[2025-07-27 18:12:25]     "exeErrorCode": 0,
[2025-07-27 18:12:25]     "exeErrorDiag": "",
[2025-07-27 18:12:25]     "pilotErrorCode": 0,
[2025-07-27 18:12:25]     "pilotErrorDiag": "",
[2025-07-27 18:12:25]  *** Listing of results directory ***
[2025-07-27 18:12:25] total 399836
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:22 queuedata.json
[2025-07-27 18:12:25] -rwx------. 1 boincer umatlas     36292 Jul 27 04:22 runpilot2-wrapper.sh
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:12:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:30 run_atlas
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:30 job.xml
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas 236646055 Jul 27 16:30 EVNT.45758987._000010.pool.root.1
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:30 start_atlas.sh
[2025-07-27 18:12:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:30 shared
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 16:30 input.tar.gz
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:30 boinc_lockfile
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 16:30 pandaJob.out
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas    980109 Jul 27 16:30 agis_schedconf.cvmfs.json
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:12:25] drwx------. 4 boincer umatlas      4096 Jul 27 16:30 pilot3
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas      6935 Jul 27 18:02 init_data.xml
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas 167150431 Jul 27 18:11 HITS.45758991._000103.pool.root.1
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas       529 Jul 27 18:11 boinc_task_state.xml
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas      1027 Jul 27 18:11 memory_monitor_summary.json
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas    306759 Jul 27 18:11 log.45758991._000103.job.log.tgz.1
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas      7759 Jul 27 18:11 heartbeat.json
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas        27 Jul 27 18:12 wrapper_checkpoint.txt
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:12 boinc_mmap_file
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas        95 Jul 27 18:12 pilot_heartbeat.json
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas       823 Jul 27 18:12 pilotlog.txt
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas    576372 Jul 27 18:12 log.45758991._000103.job.log.1
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas       357 Jul 27 18:12 output.list
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:12 runtime_log
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas    901120 Jul 27 18:12 result.tar.gz
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas       652 Jul 27 18:12 PbuLDmHpB07n9Rq4apOajLDm4fhM0noT9bVof3QYDmJG2KDmVAlNQn.diag
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 18:12 runtime_log.err
[2025-07-27 18:12:25] -rw-r--r--. 1 boincer umatlas     21895 Jul 27 18:12 stderr.txt
[2025-07-27 18:12:25] HITS file was successfully produced:
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas 167150431 Jul 27 18:11 shared/HITS.pool.root.1
[2025-07-27 18:12:25]  *** Contents of shared directory: ***
[2025-07-27 18:12:25] total 395768
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas 236646055 Jul 27 16:30 ATLAS.root_0
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:30 start_atlas.sh
[2025-07-27 18:12:25] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 16:30 input.tar.gz
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas 167150431 Jul 27 18:11 HITS.pool.root.1
[2025-07-27 18:12:25] -rw-------. 1 boincer umatlas    901120 Jul 27 18:12 result.tar.gz
18:12:27 (3616495): run_atlas exited; CPU time 45347.073711
18:12:27 (3616495): called boinc_finish(0)

</stderr_txt>
]]>

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