Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:56:46 (2079554): wrapper (7.7.26015): starting
07:56:46 (2079554): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 07:56:46] Arguments: --nthreads 6
[2025-07-28 07:56:46] Threads: 6
[2025-07-28 07:56:46] Checking for CVMFS
[2025-07-28 07:56:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 07:56:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 07:56:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 07:56:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 07:56:46] 2.11.5.0 2723278 4403 73664 148827 1 187 52220568 52428801 1418 130560 0 9836746 99.997 153932 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 07:56:46] CVMFS is ok
[2025-07-28 07:56:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 07:56:46] Checking for apptainer binary...
[2025-07-28 07:56:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 07:56:46] Running /usr/bin/apptainer --version
[2025-07-28 07:56:46] apptainer version 1.3.5-1.el9
[2025-07-28 07:56:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 07:56:46] testio008
[2025-07-28 07:56:46] apptainer works
[2025-07-28 07:56:46] Set ATHENA_PROC_NUMBER=6
[2025-07-28 07:56:46] Set ATHENA_CORE_NUMBER=6
[2025-07-28 07:56:46] Starting ATLAS job with PandaID=6747216428
[2025-07-28 07:56:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:25:55]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:25:55]  is_tar=False
[2025-07-28 09:25:55]  lfn=log.45743349._046699.job.log.tgz.1
[2025-07-28 09:25:55]  mtime=0
[2025-07-28 09:25:55]  protocol_id=None
[2025-07-28 09:25:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 09:25:55]  replicas=None
[2025-07-28 09:25:55]  scope=mc23_13p6TeV
[2025-07-28 09:25:55]  status=None
[2025-07-28 09:25:55]  status_code=0
[2025-07-28 09:25:55]  storage_token=
[2025-07-28 09:25:55]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6747216428/log.45743349._046699.job.log.tgz.1
[2025-07-28 09:25:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/fe/log.45743349._046699.job.log.tgz.1
[2025-07-28 09:25:55]  workdir=None
[2025-07-28 09:25:55] ]
[2025-07-28 09:25:55] 2025-07-28 00:25:16,064 | INFO     | transferring file log.45743349._046699.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6747216428/log.45743349._046699.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 09:25:55] 2025-07-28 00:25:16,064 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6747216428/log.45743349._046699.job.log.tgz.1 /var/lib/boinc/slots/1/log.45743349._046699.job
[2025-07-28 09:25:55] 2025-07-28 00:25:16,073 | INFO     | adding to output.list: log.45743349._046699.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/fe/log.45743349._046699.job.log.tg
[2025-07-28 09:25:55] 2025-07-28 00:25:16,074 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 09:25:55] 2025-07-28 00:25:16,074 | INFO     | summary of transferred files:
[2025-07-28 09:25:55] 2025-07-28 00:25:16,074 | INFO     |  -- lfn=log.45743349._046699.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 09:25:55] 2025-07-28 00:25:16,074 | INFO     | stage-out finished correctly
[2025-07-28 09:25:55] 2025-07-28 00:25:18,240 | WARNING  | process 2089854 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 09:25:55] 2025-07-28 00:25:18,240 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6747216428/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:25:55] 2025-07-28 00:25:18,259 | INFO     | number of running child processes to parent process 2089854: 1
[2025-07-28 09:25:55] 2025-07-28 00:25:18,259 | INFO     | maximum number of monitored processes: 6
[2025-07-28 09:25:55] 2025-07-28 00:25:18,923 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 09:25:55] 2025-07-28 00:25:20,762 | INFO     | monitor loop #400: job 0:6747216428 is in state 'finished'
[2025-07-28 09:25:55] 2025-07-28 00:25:20,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | job 6747216428 has state=finished
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | preparing for final server update for job 6747216428 in state='finished'
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | this job has now completed (state=finished)
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | log transfer has been attempted: DONE
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | job 6747216428 has finished - writing final server update
[2025-07-28 09:25:55] 2025-07-28 00:25:21,934 | INFO     | total number of processed events: 400 (read)
[2025-07-28 09:25:55] 2025-07-28 00:25:21,935 | INFO     | executing command: lscpu
[2025-07-28 09:25:55] 2025-07-28 00:25:21,947 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 09:25:55] 2025-07-28 00:25:23,127 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 09:25:55] 2025-07-28 00:25:23,128 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4092.48085
[2025-07-28 09:25:55] 2025-07-28 00:25:23,129 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6747216428/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,129 | INFO     | extracted standard info from prmon json
[2025-07-28 09:25:55] 2025-07-28 00:25:23,129 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 09:25:55] 2025-07-28 00:25:23,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 09:25:55] 2025-07-28 00:25:23,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | sum of square deviations: 158741581.98750016
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | sum of deviations: 15300644046.362503
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | mean x: 1753659742.5125
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | mean y: 2365801.1375
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | -- intersect: -169027847723.71155
[2025-07-28 09:25:55] 2025-07-28 00:25:23,130 | INFO     | intersect: -169027847723.71155
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | chi2: 1.4298787221031237
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | -- intersect: -169027847723.71155
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | current memory leak: 96.39 B/s (using 80 data points, chi2=1.43)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | could have reported an average CPU frequency of 3702 MHz (6 samples)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | ..............................
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . Timing measurements:
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . get job = 0 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . initial setup = 4 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . payload setup = 1 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . stage-in = 0 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . payload execution = 5286 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . stage-out = 0 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | . log creation = 0 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,131 | INFO     | ..............................
[2025-07-28 09:25:55] 2025-07-28 00:25:23,158 | INFO     | 
[2025-07-28 09:25:55] 2025-07-28 00:25:23,158 | INFO     | job summary report
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | --------------------------------------------------
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | PanDA job id: 6747216428
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | task id: 45743349
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | errors: (none)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | pilot state: finished 
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | transexitcode: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | exeerrorcode: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | exeerrordiag: 
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | exitcode: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | exitmsg: OK
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | cpuconsumptiontime: 27244 s
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | nevents: 400
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | neventsw: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | pid: 2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | pgrp: 2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | corecount: 6
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | event service: False
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | sizes: {0: 2397424, 1: 2397686, 11: 2397714, 5291: 2433277, 5294: 2433277, 5298: 2433471}
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | --------------------------------------------------
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | 
[2025-07-28 09:25:55] 2025-07-28 00:25:23,159 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | job 6747216428 has completed (purged errors)
[2025-07-28 09:25:55] 2025-07-28 00:25:23,168 | INFO     | overall cleanup function is called
[2025-07-28 09:25:55] 2025-07-28 00:25:24,174 | INFO     | --- collectZombieJob: --- 10, [2089854]
[2025-07-28 09:25:55] 2025-07-28 00:25:24,174 | INFO     | zombie collector waiting for pid 2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:24,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:25:55] 2025-07-28 00:25:24,174 | INFO     | collected zombie processes
[2025-07-28 09:25:55] 2025-07-28 00:25:24,174 | INFO     | will attempt to kill all subprocesses of pid=2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:24,194 | INFO     | process IDs to be killed: [2089854] (in reverse order)
[2025-07-28 09:25:55] 2025-07-28 00:25:24,207 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:25:55] 2025-07-28 00:25:24,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:25:55] 2025-07-28 00:25:24,208 | INFO     | did not find any defunct processes belonging to 2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | did not find any defunct processes belonging to 2089854
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | ready for new job
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | ***************************************
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | ***************************************
[2025-07-28 09:25:55] 2025-07-28 00:25:24,209 | INFO     | 
[2025-07-28 09:25:55] 2025-07-28 00:25:24,210 | INFO     | architecture information:
[2025-07-28 09:25:55] 2025-07-28 00:25:24,210 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:25:55] 2025-07-28 00:25:24,214 | INFO     | cat /etc/os-release:
[2025-07-28 09:25:55] NAME="CentOS Linux"
[2025-07-28 09:25:55] VERSION="7 (Core)"
[2025-07-28 09:25:55] ID="centos"
[2025-07-28 09:25:55] ID_LIKE="rhel fedora"
[2025-07-28 09:25:55] VERSION_ID="7"
[2025-07-28 09:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:25:55] ANSI_COLOR="0;31"
[2025-07-28 09:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:25:55] HOME_URL="https://www.centos.org/"
[2025-07-28 09:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:25:55] 
[2025-07-28 09:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:25:55] 
[2025-07-28 09:25:55] 2025-07-28 00:25:24,215 | INFO     | ***************************************
[2025-07-28 09:25:55] 2025-07-28 00:25:24,717 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-07-28 09:25:55] 2025-07-28 00:25:24,722 | INFO     | sufficient remaining disk space (271254028288 B)
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | INFO     | update_server=False
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:25:55] 2025-07-28 00:25:24,723 | INFO     | aborting loop
[2025-07-28 09:25:55] 2025-07-28 00:25:24,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:25:55] 2025-07-28 00:25:25,522 | INFO     | all data control threads have been joined
[2025-07-28 09:25:55] 2025-07-28 00:25:25,599 | INFO     | all payload control threads have been joined
[2025-07-28 09:25:55] 2025-07-28 00:25:25,636 | INFO     | all job control threads have been joined
[2025-07-28 09:25:55] 2025-07-28 00:25:25,728 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:25,728 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:25,728 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:25,828 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,132 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,161 | INFO     | [job] validate thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,166 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,260 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,458 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,527 | INFO     | [data] control thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,604 | INFO     | [payload] control thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,642 | INFO     | [job] control thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,728 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:26,760 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:28,959 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:25:55] 2025-07-28 00:25:29,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799164315456)>', '<ExcThread(monitor, started 139798677276416)>']
[2025-07-28 09:25:55] 2025-07-28 00:25:34,882 | INFO     | all workflow threads have been joined
[2025-07-28 09:25:55] 2025-07-28 00:25:34,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:25:55] 2025-07-28 00:25:34,882 | INFO     | traces error code: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:34,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:25:55] 2025-07-28 00:25:55,713 | INFO     | PID=2083274 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | INFO     | .. there are 3 such processes running
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:25:55] 2025-07-28 00:25:55,717 | INFO     | [monitor] control thread has ended
[2025-07-28 09:25:55] 2025-07-28 00:25:55,748 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:25:55] 2025-07-28 00:25:55,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:25:55] 2025-07-28 00:25:55,751 [wrapper] pilotpid: 2083274
[2025-07-28 09:25:55] 2025-07-28 00:25:55,751 [wrapper] Pilot exit status: 0
[2025-07-28 09:25:55] 2025-07-28 00:25:55,754 [wrapper] pandaids: 6747216428
[2025-07-28 09:25:55] 2025-07-28 00:25:55,761 [wrapper] cleanup supervisor_pilot 2110014 2083275
[2025-07-28 09:25:55] 2025-07-28 00:25:55,762 [wrapper] Test setup, not cleaning
[2025-07-28 09:25:55] 2025-07-28 00:25:55,763 [wrapper] apfmon messages muted
[2025-07-28 09:25:55] 2025-07-28 00:25:55,764 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:25:55] 2025-07-28 00:25:55,765 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:25:55]  *** Error codes and diagnostics ***
[2025-07-28 09:25:55]     "exeErrorCode": 0,
[2025-07-28 09:25:55]     "exeErrorDiag": "",
[2025-07-28 09:25:55]     "pilotErrorCode": 0,
[2025-07-28 09:25:55]     "pilotErrorDiag": "",
[2025-07-28 09:25:55]  *** Listing of results directory ***
[2025-07-28 09:25:55] total 352640
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc    530466 Jul 27 19:10 pilot3.tar.gz
[2025-07-28 09:25:55] -rwx------. 1 boinc boinc     36292 Jul 27 19:19 runpilot2-wrapper.sh
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc      5112 Jul 27 19:19 queuedata.json
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc       100 Jul 28 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:25:55] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 07:56 run_atlas
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc       105 Jul 28 07:56 job.xml
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc     15095 Jul 28 07:56 start_atlas.sh
[2025-07-28 09:25:55] drwxrwx--x. 2 boinc boinc        68 Jul 28 07:56 shared
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc    542900 Jul 28 07:56 input.tar.gz
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc      9508 Jul 28 07:56 init_data.xml
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc 142789374 Jul 28 07:56 EVNT.45743347._001763.pool.root.1
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc         0 Jul 28 07:56 boinc_lockfile
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc      2562 Jul 28 07:56 pandaJob.out
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc    980109 Jul 28 07:56 agis_schedconf.cvmfs.json
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc   1593052 Jul 28 07:56 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:25:55] drwx------. 4 boinc boinc      4096 Jul 28 07:56 pilot3
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc 212848494 Jul 28 09:24 HITS.45743349._046699.pool.root.1
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc       529 Jul 28 09:25 boinc_task_state.xml
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc      1016 Jul 28 09:25 memory_monitor_summary.json
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc    277736 Jul 28 09:25 log.45743349._046699.job.log.tgz.1
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc      7752 Jul 28 09:25 heartbeat.json
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc        27 Jul 28 09:25 wrapper_checkpoint.txt
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc      8192 Jul 28 09:25 boinc_mmap_file
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc       822 Jul 28 09:25 pilotlog.txt
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc        95 Jul 28 09:25 pilot_heartbeat.json
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc    525145 Jul 28 09:25 log.45743349._046699.job.log.1
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc       357 Jul 28 09:25 output.list
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc       620 Jul 28 09:25 runtime_log
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc    819200 Jul 28 09:25 result.tar.gz
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc      8618 Jul 28 09:25 runtime_log.err
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc       642 Jul 28 09:25 hwoKDmGeD07n9Rq4apOajLDm4fhM0noT9bVof3QYDmYN2KDmDokySn.diag
[2025-07-28 09:25:55] -rw-r--r--. 1 boinc boinc     21269 Jul 28 09:25 stderr.txt
[2025-07-28 09:25:55] HITS file was successfully produced:
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc 212848494 Jul 28 09:24 shared/HITS.pool.root.1
[2025-07-28 09:25:55]  *** Contents of shared directory: ***
[2025-07-28 09:25:55] total 348652
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc     15095 Jul 28 07:56 start_atlas.sh
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc    542900 Jul 28 07:56 input.tar.gz
[2025-07-28 09:25:55] -rw-r--r--. 2 boinc boinc 142789374 Jul 28 07:56 ATLAS.root_0
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc 212848494 Jul 28 09:24 HITS.pool.root.1
[2025-07-28 09:25:55] -rw-------. 1 boinc boinc    819200 Jul 28 09:25 result.tar.gz
09:25:57 (2079554): run_atlas exited; CPU time 27274.596063
09:25:57 (2079554): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN