Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:59:44 (2583145): wrapper (7.7.26015): starting
15:59:44 (2583145): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:59:44] Arguments: --nthreads 8
[2025-07-27 15:59:44] Threads: 8
[2025-07-27 15:59:44] Checking for CVMFS
[2025-07-27 15:59:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:59:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:59:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:59:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:59:44] 2.13.1.0 116762 8845 201860 148822 2 188 34936451 40960001 12024 16776704 0 123342029 99.999 339679 39061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 15:59:44] CVMFS is ok
[2025-07-27 15:59:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:59:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:59:44] Further information can be found at the LHC@home message board.
[2025-07-27 15:59:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:59:44] Checking for apptainer binary...
[2025-07-27 15:59:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:59:44] Running /usr/bin/apptainer --version
[2025-07-27 15:59:44] apptainer version 1.4.1-1.el9
[2025-07-27 15:59:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:59:45] c-208-39.aglt2.org
[2025-07-27 15:59:45] apptainer works
[2025-07-27 15:59:45] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:59:45] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:59:45] Starting ATLAS job with PandaID=6747413031
[2025-07-27 15:59:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:54:51]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:54:51]  workdir=None
[2025-07-27 16:54:51] ]
[2025-07-27 16:54:51] 2025-07-27 20:54:13,922 | INFO     | transferring file log.45743349._049914.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/log.45743349._049914.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:54:51] 2025-07-27 20:54:13,922 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/log.45743349._049914.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._049914.job
[2025-07-27 16:54:51] 2025-07-27 20:54:13,940 | INFO     | adding to output.list: log.45743349._049914.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/35/log.45743349._049914.job.log.tg
[2025-07-27 16:54:51] 2025-07-27 20:54:13,941 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:54:51] 2025-07-27 20:54:13,941 | INFO     | summary of transferred files:
[2025-07-27 16:54:51] 2025-07-27 20:54:13,941 | INFO     |  -- lfn=log.45743349._049914.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:54:51] 2025-07-27 20:54:13,941 | INFO     | stage-out finished correctly
[2025-07-27 16:54:51] 2025-07-27 20:54:13,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:54:51] 2025-07-27 20:54:14,288 | INFO     | job 6747413031 has state=finished
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | preparing for final server update for job 6747413031 in state='finished'
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | job 6747413031 has finished - writing final server update
[2025-07-27 16:54:51] 2025-07-27 20:54:14,289 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:54:51] 2025-07-27 20:54:14,290 | INFO     | executing command: lscpu
[2025-07-27 16:54:51] 2025-07-27 20:54:14,349 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:54:51] 2025-07-27 20:54:16,574 | INFO     | PID=2590139 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:54:51] 2025-07-27 20:54:16,575 | INFO     | .. there are 16 such processes running
[2025-07-27 16:54:51] 2025-07-27 20:54:17,879 | WARNING  | process 2609128 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 16:54:51] 2025-07-27 20:54:17,880 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,880 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,881 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3481239 B
[2025-07-27 16:54:51] 2025-07-27 20:54:17,881 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15777 B
[2025-07-27 16:54:51] 2025-07-27 20:54:17,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 16:54:51] 2025-07-27 20:54:17,905 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:54:51] 2025-07-27 20:54:17,915 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3770.1193828124997
[2025-07-27 16:54:51] 2025-07-27 20:54:17,923 | INFO     | sufficient remaining disk space (166082904064 B)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,923 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,925 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6747413031: 3770340 B (within 2537553920 B limit)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,926 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6747413031/HITS.45743349._049914.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,926 | INFO     | total size of present files: 0 B (workdir size: 3770340 B)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,926 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/HITS.45743349._049914.pool.root.1 since it does not exist
[2025-07-27 16:54:51] 2025-07-27 20:54:17,930 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413031/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,931 | INFO     | extracted standard info from prmon json
[2025-07-27 16:54:51] 2025-07-27 20:54:17,931 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:54:51] 2025-07-27 20:54:17,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:54:51] 2025-07-27 20:54:17,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:54:51] 2025-07-27 20:54:17,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:54:51] 2025-07-27 20:54:17,932 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | sum of square deviations: 30168007.5
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | sum of deviations: 132773576.0
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | mean x: 1753648095.5
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | mean y: 2522637.086956522
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | -- intersect: -7715525321.006547
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | intersect: -7715525321.006547
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | chi2: 0.0009692539288684328
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | -- intersect: -7715525321.006547
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | current memory leak: 4.40 B/s (using 46 data points, chi2=0.00)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | could have reported an average CPU frequency of 3757 MHz (5 samples)
[2025-07-27 16:54:51] 2025-07-27 20:54:17,933 | INFO     | ..............................
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . Timing measurements:
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . get job = 0 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . initial setup = 2 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . payload setup = 5 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . stage-in = 0 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . payload execution = 3236 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . stage-out = 0 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | . log creation = 0 s
[2025-07-27 16:54:51] 2025-07-27 20:54:17,934 | INFO     | ..............................
[2025-07-27 16:54:51] 2025-07-27 20:54:17,999 | INFO     | 
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | job summary report
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | --------------------------------------------------
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | PanDA job id: 6747413031
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | task id: 45743349
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | errors: (none)
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | pilot state: finished 
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | transexitcode: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | exeerrorcode: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | exeerrordiag: 
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | exitcode: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | exitmsg: OK
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | cpuconsumptiontime: 24241 s
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | nevents: 400
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | neventsw: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | pid: 2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:18,000 | INFO     | pgrp: 2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | corecount: 8
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | event service: False
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3244: 2423317, 3245: 2432371, 3249: 2432665}
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | --------------------------------------------------
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | 
[2025-07-27 16:54:51] 2025-07-27 20:54:18,001 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 16:54:51] 2025-07-27 20:54:18,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | job 6747413031 has completed (purged errors)
[2025-07-27 16:54:51] 2025-07-27 20:54:18,023 | INFO     | overall cleanup function is called
[2025-07-27 16:54:51] 2025-07-27 20:54:18,359 | INFO     | number of running child processes to parent process 2609128: 1
[2025-07-27 16:54:51] 2025-07-27 20:54:18,359 | INFO     | maximum number of monitored processes: 6
[2025-07-27 16:54:51] 2025-07-27 20:54:18,360 | INFO     | aborting job monitoring since job object (job id=6747413031) has expired
[2025-07-27 16:54:51] 2025-07-27 20:54:19,031 | INFO     | --- collectZombieJob: --- 10, [2609128]
[2025-07-27 16:54:51] 2025-07-27 20:54:19,032 | INFO     | zombie collector waiting for pid 2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:19,032 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:54:51] 2025-07-27 20:54:19,032 | INFO     | collected zombie processes
[2025-07-27 16:54:51] 2025-07-27 20:54:19,032 | INFO     | will attempt to kill all subprocesses of pid=2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:19,389 | INFO     | process IDs to be killed: [2609128] (in reverse order)
[2025-07-27 16:54:51] 2025-07-27 20:54:19,508 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:54:51] 2025-07-27 20:54:19,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:54:51] 2025-07-27 20:54:19,527 | INFO     | did not find any defunct processes belonging to 2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:19,543 | INFO     | did not find any defunct processes belonging to 2609128
[2025-07-27 16:54:51] 2025-07-27 20:54:19,543 | INFO     | ready for new job
[2025-07-27 16:54:51] 2025-07-27 20:54:19,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:54:51] 2025-07-27 20:54:19,545 | INFO     | ***************************************
[2025-07-27 16:54:51] 2025-07-27 20:54:19,545 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:54:51] 2025-07-27 20:54:19,545 | INFO     | ***************************************
[2025-07-27 16:54:51] 2025-07-27 20:54:19,545 | INFO     | 
[2025-07-27 16:54:51] 2025-07-27 20:54:19,549 | INFO     | architecture information:
[2025-07-27 16:54:51] 2025-07-27 20:54:19,549 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:54:51] 2025-07-27 20:54:19,564 | INFO     | cat /etc/os-release:
[2025-07-27 16:54:51] NAME="CentOS Linux"
[2025-07-27 16:54:51] VERSION="7 (Core)"
[2025-07-27 16:54:51] ID="centos"
[2025-07-27 16:54:51] ID_LIKE="rhel fedora"
[2025-07-27 16:54:51] VERSION_ID="7"
[2025-07-27 16:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:54:51] ANSI_COLOR="0;31"
[2025-07-27 16:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:54:51] HOME_URL="https://www.centos.org/"
[2025-07-27 16:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:54:51] 
[2025-07-27 16:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:54:51] 
[2025-07-27 16:54:51] 2025-07-27 20:54:19,565 | INFO     | ***************************************
[2025-07-27 16:54:51] 2025-07-27 20:54:20,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 16:54:51] 2025-07-27 20:54:20,086 | INFO     | sufficient remaining disk space (166081855488 B)
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | INFO     | update_server=False
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:54:51] 2025-07-27 20:54:20,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:54:51] 2025-07-27 20:54:20,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:54:51] 2025-07-27 20:54:20,088 | INFO     | aborting loop
[2025-07-27 16:54:51] 2025-07-27 20:54:20,115 | INFO     | all data control threads have been joined
[2025-07-27 16:54:51] 2025-07-27 20:54:20,924 | INFO     | all job control threads have been joined
[2025-07-27 16:54:51] 2025-07-27 20:54:20,954 | INFO     | all payload control threads have been joined
[2025-07-27 16:54:51] 2025-07-27 20:54:21,091 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,093 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,120 | INFO     | [data] control thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,613 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,893 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,929 | INFO     | [job] control thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,960 | INFO     | [payload] control thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:21,999 | INFO     | [job] validate thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:22,090 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:22,221 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:22,261 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:22,424 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:22,594 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:23,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:54:51] 2025-07-27 20:54:24,008 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:24,094 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:30,987 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:54:51] 2025-07-27 20:54:31,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:54:51] 2025-07-27 20:54:32,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639540291392)>', '<ExcThread(monitor, started 140638838322944)>']
[2025-07-27 16:54:51] 2025-07-27 20:54:37,774 | INFO     | all workflow threads have been joined
[2025-07-27 16:54:51] 2025-07-27 20:54:37,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:54:51] 2025-07-27 20:54:37,775 | INFO     | traces error code: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:37,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:54:51] 2025-07-27 20:54:51,099 | INFO     | PID=2590139 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:54:51] 2025-07-27 20:54:51,099 | INFO     | .. there are 16 such processes running
[2025-07-27 16:54:51] 2025-07-27 20:54:51,099 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:54:51] 2025-07-27 20:54:51,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:54:51] 2025-07-27 20:54:51,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:54:51] 2025-07-27 20:54:51,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:54:51] 2025-07-27 20:54:51,100 | INFO     | [monitor] control thread has ended
[2025-07-27 16:54:51] 2025-07-27 20:54:51,196 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:54:51] 2025-07-27 20:54:51,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:54:51] 2025-07-27 20:54:51,201 [wrapper] pilotpid: 2590139
[2025-07-27 16:54:51] 2025-07-27 20:54:51,204 [wrapper] Pilot exit status: 0
[2025-07-27 16:54:51] 2025-07-27 20:54:51,215 [wrapper] pandaids: 6747413031
[2025-07-27 16:54:51] 2025-07-27 20:54:51,300 [wrapper] cleanup supervisor_pilot 2942448 2590140
[2025-07-27 16:54:51] 2025-07-27 20:54:51,303 [wrapper] Test setup, not cleaning
[2025-07-27 16:54:51] 2025-07-27 20:54:51,306 [wrapper] apfmon messages muted
[2025-07-27 16:54:51] 2025-07-27 20:54:51,309 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:54:51] 2025-07-27 20:54:51,311 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:54:51]  *** Error codes and diagnostics ***
[2025-07-27 16:54:51]     "exeErrorCode": 0,
[2025-07-27 16:54:51]     "exeErrorDiag": "",
[2025-07-27 16:54:51]     "pilotErrorCode": 0,
[2025-07-27 16:54:51]     "pilotErrorDiag": "",
[2025-07-27 16:54:51]  *** Listing of results directory ***
[2025-07-27 16:54:51] total 346308
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 16:54:51] -rwx------. 1 boincer umatlas     36292 Jul 27 10:23 runpilot2-wrapper.sh
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:23 queuedata.json
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:54:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:59 run_atlas
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:59 job.xml
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas 145641863 Jul 27 15:59 EVNT.45743347._002774.pool.root.1
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:59 start_atlas.sh
[2025-07-27 16:54:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:59 shared
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 15:59 input.tar.gz
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:59 boinc_lockfile
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:59 pandaJob.out
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas    980125 Jul 27 15:59 agis_schedconf.cvmfs.json
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:59 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:54:51] drwx------. 4 boincer umatlas      4096 Jul 27 15:59 pilot3
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas      7174 Jul 27 16:47 init_data.xml
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas 203808610 Jul 27 16:53 HITS.45743349._049914.pool.root.1
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:53 boinc_task_state.xml
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas        95 Jul 27 16:53 pilot_heartbeat.json
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas      1026 Jul 27 16:54 memory_monitor_summary.json
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas    305070 Jul 27 16:54 log.45743349._049914.job.log.tgz.1
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas      7762 Jul 27 16:54 heartbeat.json
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:54 boinc_mmap_file
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:54 wrapper_checkpoint.txt
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas       823 Jul 27 16:54 pilotlog.txt
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas    336878 Jul 27 16:54 log.45743349._049914.job.log.1
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas       357 Jul 27 16:54 output.list
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:54 runtime_log
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas    665600 Jul 27 16:54 result.tar.gz
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 16:54 runtime_log.err
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas       651 Jul 27 16:54 qyCLDmoSH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEXVLDmCbfl9m.diag
[2025-07-27 16:54:51] -rw-r--r--. 1 boincer umatlas     22615 Jul 27 16:54 stderr.txt
[2025-07-27 16:54:51] HITS file was successfully produced:
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas 203808610 Jul 27 16:53 shared/HITS.pool.root.1
[2025-07-27 16:54:51]  *** Contents of shared directory: ***
[2025-07-27 16:54:51] total 342472
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas 145641863 Jul 27 15:59 ATLAS.root_0
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:59 start_atlas.sh
[2025-07-27 16:54:51] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 15:59 input.tar.gz
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas 203808610 Jul 27 16:53 HITS.pool.root.1
[2025-07-27 16:54:51] -rw-------. 1 boincer umatlas    665600 Jul 27 16:54 result.tar.gz
16:54:52 (2583145): run_atlas exited; CPU time 24326.904246
16:54:52 (2583145): called boinc_finish(0)

</stderr_txt>
]]>

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