Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:51:17 (3583110): wrapper (7.7.26015): starting
12:51:17 (3583110): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:51:17] Arguments: --nthreads 12
[2025-07-27 12:51:17] Threads: 12
[2025-07-27 12:51:17] Checking for CVMFS
[2025-07-27 12:51:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:51:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:51:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:51:18] 2.11.5.0 10565 25805 245088 148822 2 519 34157925 45568000 9689 130560 0 198729892 99.781 133355522 23045 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 12:51:18] CVMFS is ok
[2025-07-27 12:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:51:18] Further information can be found at the LHC@home message board.
[2025-07-27 12:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:51:18] Checking for apptainer binary...
[2025-07-27 12:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:51:18] Running /usr/bin/apptainer --version
[2025-07-27 12:51:18] apptainer version 1.4.1-1.el9
[2025-07-27 12:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:51:18] wns0072.triumf.lcg
[2025-07-27 12:51:18] apptainer works
[2025-07-27 12:51:18] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:51:18] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:51:18] Starting ATLAS job with PandaID=6747571706
[2025-07-27 12:51:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:54:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | found no stored workdir sizes
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | WARNING  | wrong length of table data, x=[1753645909.0], y=[987.0] (must be same and length>=4)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | could have reported an average CPU frequency of 2305 MHz (4 samples)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . Timing measurements:
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . get job = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . initial setup = 2 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload setup = 4 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-in = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload execution = 15 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-out = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . log creation = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:54:37] 2025-07-27 19:54:04,874 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747571706/pilotlog.txt
[2025-07-27 12:54:37] 2025-07-27 19:54:04,883 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 12:54:37] - Log from pilotlog.txt -
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | found no stored workdir sizes
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | WARNING  | wrong length of table data, x=[1753645909.0], y=[987.0] (must be same and length>=4)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | could have reported an average CPU frequency of 2305 MHz (4 samples)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . Timing measurements:
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . get job = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . initial setup = 2 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload setup = 4 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-in = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload execution = 15 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-out = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . log creation = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:54:37] 2025-07-27 19:54:04,874 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747571706/pilotlog.txt
[2025-07-27 12:54:37] 2025-07-27 19:54:04,883 | WARNING  | 
[2025-07-27 12:54:37] [begin log extracts]
[2025-07-27 12:54:37] - Log from pilotlog.txt -
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | WARNING  | found no stored workdir sizes
[2025-07-27 12:54:37] 2025-07-27 19:54:04,872 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | WARNING  | wrong length of table data, x=[1753645909.0], y=[987.0] (must be same and length>=4)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | could have reported an average CPU frequency of 2305 MHz (4 samples)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . Timing measurements:
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . get job = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . initial setup = 2 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload setup = 4 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-in = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . payload execution = 15 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . stage-out = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | . log creation = 0 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | ..............................
[2025-07-27 12:54:37] 2025-07-27 19:54:04,873 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:54:37] 2025-07-27 19:54:04,874 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747571706/pilotlog.txt
[2025-07-27 12:54:37] [end log extracts]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,884 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,885 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | 
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | job summary report
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | --------------------------------------------------
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | PanDA job id: 6747571706
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | task id: 45743349
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 12:51:56,629 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | pilot state: failed 
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | transexitcode: 65
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | exeerrorcode: 65
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | exitcode: 65
[2025-07-27 12:54:37] 2025-07-27 19:54:04,944 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | nevents: 0
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | neventsw: 0
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | pid: 3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | pgrp: 3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | corecount: 12
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | event service: False
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | sizes: {0: 2397422, 3: 2397684, 11: 2397712, 23: 2420887, 25: 2425207, 144: 2425345}
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | --------------------------------------------------
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | 
[2025-07-27 12:54:37] 2025-07-27 19:54:04,945 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 12:54:37] 2025-07-27 19:54:04,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,959 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:54:37] 2025-07-27 19:54:04,960 | INFO     | job 6747571706 has completed (purged errors)
[2025-07-27 12:54:37] 2025-07-27 19:54:04,960 | INFO     | overall cleanup function is called
[2025-07-27 12:54:37] 2025-07-27 19:54:05,965 | INFO     | --- collectZombieJob: --- 10, [3592978]
[2025-07-27 12:54:37] 2025-07-27 19:54:05,965 | INFO     | zombie collector waiting for pid 3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:05,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:54:37] 2025-07-27 19:54:05,965 | INFO     | collected zombie processes
[2025-07-27 12:54:37] 2025-07-27 19:54:05,965 | INFO     | will attempt to kill all subprocesses of pid=3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:06,102 | INFO     | process IDs to be killed: [3592978] (in reverse order)
[2025-07-27 12:54:37] 2025-07-27 19:54:06,157 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:54:37] 2025-07-27 19:54:06,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:54:37] 2025-07-27 19:54:06,164 | INFO     | did not find any defunct processes belonging to 3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:06,170 | INFO     | did not find any defunct processes belonging to 3592978
[2025-07-27 12:54:37] 2025-07-27 19:54:06,171 | INFO     | ready for new job
[2025-07-27 12:54:37] 2025-07-27 19:54:06,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:54:37] 2025-07-27 19:54:06,172 | INFO     | ***************************************
[2025-07-27 12:54:37] 2025-07-27 19:54:06,173 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:54:37] 2025-07-27 19:54:06,173 | INFO     | ***************************************
[2025-07-27 12:54:37] 2025-07-27 19:54:06,173 | INFO     | 
[2025-07-27 12:54:37] 2025-07-27 19:54:06,175 | INFO     | architecture information:
[2025-07-27 12:54:37] 2025-07-27 19:54:06,175 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:54:37] 2025-07-27 19:54:06,187 | INFO     | cat /etc/os-release:
[2025-07-27 12:54:37] NAME="CentOS Linux"
[2025-07-27 12:54:37] VERSION="7 (Core)"
[2025-07-27 12:54:37] ID="centos"
[2025-07-27 12:54:37] ID_LIKE="rhel fedora"
[2025-07-27 12:54:37] VERSION_ID="7"
[2025-07-27 12:54:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:54:37] ANSI_COLOR="0;31"
[2025-07-27 12:54:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:54:37] HOME_URL="https://www.centos.org/"
[2025-07-27 12:54:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:54:37] 
[2025-07-27 12:54:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:54:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:54:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:54:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:54:37] 
[2025-07-27 12:54:37] 2025-07-27 19:54:06,187 | INFO     | ***************************************
[2025-07-27 12:54:37] 2025-07-27 19:54:06,690 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 12:54:37] 2025-07-27 19:54:06,704 | INFO     | sufficient remaining disk space (2137942654976 B)
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | INFO     | update_server=False
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:54:37] 2025-07-27 19:54:06,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:54:37] 2025-07-27 19:54:06,946 | INFO     | all data control threads have been joined
[2025-07-27 12:54:37] 2025-07-27 19:54:07,164 | INFO     | all job control threads have been joined
[2025-07-27 12:54:37] 2025-07-27 19:54:07,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:54:37] 2025-07-27 19:54:07,380 | INFO     | aborting loop
[2025-07-27 12:54:37] 2025-07-27 19:54:07,710 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:07,710 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:07,720 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:07,756 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:07,815 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:07,854 | INFO     | all payload control threads have been joined
[2025-07-27 12:54:37] 2025-07-27 19:54:07,951 | INFO     | [data] control thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,169 | INFO     | [job] control thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,369 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,394 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,710 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,710 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,859 | INFO     | [payload] control thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,941 | INFO     | [job] validate thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:08,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:54:37] 2025-07-27 19:54:09,053 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:12,993 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:54:37] 2025-07-27 19:54:13,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200869762880)>', '<ExcThread(monitor, started 140200307042048)>']
[2025-07-27 12:54:37] 2025-07-27 19:54:18,611 | INFO     | all workflow threads have been joined
[2025-07-27 12:54:37] 2025-07-27 19:54:18,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:54:37] 2025-07-27 19:54:18,611 | INFO     | traces error code: 0
[2025-07-27 12:54:37] 2025-07-27 19:54:18,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:54:37] 2025-07-27 19:54:37,275 | INFO     | PID=3586676 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | INFO     | .. there are 9 such processes running
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 12:54:37] 2025-07-27 19:54:37,276 | INFO     | [monitor] control thread has ended
[2025-07-27 12:54:37] 2025-07-27 19:54:37,399 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:54:37] 2025-07-27 19:54:37,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:54:37] 2025-07-27 19:54:37,403 [wrapper] pilotpid: 3586676
[2025-07-27 12:54:37] 2025-07-27 19:54:37,405 [wrapper] Pilot exit status: 0
[2025-07-27 12:54:37] 2025-07-27 19:54:37,413 [wrapper] pandaids: 6747571706
[2025-07-27 12:54:37] 2025-07-27 19:54:37,449 [wrapper] cleanup supervisor_pilot 3586682 3586677
[2025-07-27 12:54:37] 2025-07-27 19:54:37,451 [wrapper] Test setup, not cleaning
[2025-07-27 12:54:37] 2025-07-27 19:54:37,454 [wrapper] apfmon messages muted
[2025-07-27 12:54:37] 2025-07-27 19:54:37,457 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:54:37] 2025-07-27 19:54:37,459 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:54:37]  *** Error codes and diagnostics ***
[2025-07-27 12:54:37]     "exeErrorCode": 65,
[2025-07-27 12:54:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 12:54:37]     "pilotErrorCode": 1305,
[2025-07-27 12:54:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 12:54:37]  *** Listing of results directory ***
[2025-07-27 12:54:37] total 147548
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc    530466 Jul 27 09:55 pilot3.tar.gz
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc      5112 Jul 27 10:28 queuedata.json
[2025-07-27 12:54:37] -rwx------. 1 boinc boinc     36292 Jul 27 10:29 runpilot2-wrapper.sh
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc       100 Jul 27 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:54:37] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 12:51 run_atlas
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc       105 Jul 27 12:51 job.xml
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc      6596 Jul 27 12:51 init_data.xml
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc 147028833 Jul 27 12:51 EVNT.45743347._001630.pool.root.1
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc     15095 Jul 27 12:51 start_atlas.sh
[2025-07-27 12:54:37] drwxrwx--x. 2 boinc boinc      4096 Jul 27 12:51 shared
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc    542903 Jul 27 12:51 input.tar.gz
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc         0 Jul 27 12:51 boinc_lockfile
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc      2563 Jul 27 12:51 pandaJob.out
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc    980125 Jul 27 12:51 agis_schedconf.cvmfs.json
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc   1593052 Jul 27 12:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:54:37] drwx------. 4 boinc boinc      4096 Jul 27 12:51 pilot3
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc       521 Jul 27 12:51 boinc_task_state.xml
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc       954 Jul 27 12:52 memory_monitor_summary.json
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc     20438 Jul 27 12:52 log.45743349._052910.job.log.tgz.1
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc      8387 Jul 27 12:54 heartbeat.json
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc      8192 Jul 27 12:54 boinc_mmap_file
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc        22 Jul 27 12:54 wrapper_checkpoint.txt
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc       892 Jul 27 12:54 pilotlog.txt
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc        95 Jul 27 12:54 pilot_heartbeat.json
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc     74436 Jul 27 12:54 log.45743349._052910.job.log.1
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc       188 Jul 27 12:54 output.list
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc       620 Jul 27 12:54 runtime_log
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc    112640 Jul 27 12:54 result.tar.gz
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc      8485 Jul 27 12:54 runtime_log.err
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc       645 Jul 27 12:54 AQ4KDmiMK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmKq2KDmlM8vLo.diag
[2025-07-27 12:54:37] -rw-r--r--. 1 boinc boinc     21615 Jul 27 12:54 stderr.txt
[2025-07-27 12:54:37] No HITS result produced
[2025-07-27 12:54:37]  *** Contents of shared directory: ***
[2025-07-27 12:54:37] total 144244
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc 147028833 Jul 27 12:51 ATLAS.root_0
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc     15095 Jul 27 12:51 start_atlas.sh
[2025-07-27 12:54:37] -rw-r--r--. 2 boinc boinc    542903 Jul 27 12:51 input.tar.gz
[2025-07-27 12:54:37] -rw-------. 1 boinc boinc    112640 Jul 27 12:54 result.tar.gz
12:54:38 (3583110): run_atlas exited; CPU time 19.658564
12:54:38 (3583110): called boinc_finish(0)

</stderr_txt>
]]>

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