Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:18:17 (23207): wrapper (7.7.26015): starting
12:18:17 (23207): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 12:18:17] Arguments: --nthreads 8
[2025-07-28 12:18:17] Threads: 8
[2025-07-28 12:18:17] Checking for CVMFS
[2025-07-28 12:18:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:18:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:18:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:18:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:18:20] 2.11.2.0 3973 110980 140232 148845 1 109 15979769 25165824 4353 130560 0 88357161 99.860 54976236 4211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 12:18:20] CVMFS is ok
[2025-07-28 12:18:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:18:20] Checking for apptainer binary...
[2025-07-28 12:18:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:18:20] Running /usr/bin/apptainer --version
[2025-07-28 12:18:20] apptainer version 1.3.2-1.el7
[2025-07-28 12:18:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:18:21] cg-vwn471.simple-grid.lan
[2025-07-28 12:18:21] apptainer works
[2025-07-28 12:18:21] Set ATHENA_PROC_NUMBER=8
[2025-07-28 12:18:21] Set ATHENA_CORE_NUMBER=8
[2025-07-28 12:18:21] Starting ATLAS job with PandaID=6747413021
[2025-07-28 12:18:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:22:21]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:22:21] 2025-07-28 14:21:49,078 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:22:21] 2025-07-28 14:21:49,079 | INFO     | sum of square deviations: 4233158440.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | sum of deviations: -62315759080.99999
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | mean x: 1753705232.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | mean y: 2552231.510460251
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | -- intersect: 25818612340.142067
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | intersect: 25818612340.142067
[2025-07-28 16:22:21] 2025-07-28 14:21:49,081 | INFO     | chi2: 2.632083064525374
[2025-07-28 16:22:21] 2025-07-28 14:21:49,082 | INFO     | sum of square deviations: 3972995422.5
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | sum of deviations: -43721453479.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | mean x: 1753705079.5
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | mean y: 2562966.8974358975
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | -- intersect: 19301486548.590847
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | intersect: 19301486548.590847
[2025-07-28 16:22:21] 2025-07-28 14:21:49,084 | INFO     | chi2: 1.7940976505626507
[2025-07-28 16:22:21] 2025-07-28 14:21:49,085 | INFO     | current chi2=1.7940976505626507 (change=31.83734682453237 %)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,085 | INFO     | sum of square deviations: 3723716330.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | sum of deviations: -41951971396.000015
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | mean x: 1753704927.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | mean y: 2564049.580786026
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | -- intersect: 19760078428.912766
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | intersect: 19760078428.912766
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | chi2: 1.7919599562768924
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | current chi2=1.7919599562768924 (change=0.11915150131810645 %)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,087 | INFO     | right removable region: 228
[2025-07-28 16:22:21] 2025-07-28 14:21:49,088 | INFO     | sum of square deviations: 3972995422.5
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | sum of deviations: -100315045583.99997
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | mean x: 1753705384.5
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | mean y: 2574298.0256410255
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | -- intersect: 44282271825.672035
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | intersect: 44282271825.672035
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | chi2: 1.107403066598127
[2025-07-28 16:22:21] 2025-07-28 14:21:49,090 | INFO     | current chi2=1.107403066598127 (change=57.926743212497456 %)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,091 | INFO     | sum of square deviations: 3723716330.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,092 | INFO     | sum of deviations: -99761572636.99997
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | mean x: 1753705537.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | mean y: 2573925.9475982534
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | -- intersect: 46985858045.587975
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | intersect: 46985858045.587975
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | chi2: 1.0805980388498277
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | current chi2=1.0805980388498277 (change=2.420530388329387 %)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,093 | INFO     | left removable region: 20
[2025-07-28 16:22:21] 2025-07-28 14:21:49,094 | INFO     | sum of square deviations: 2790348132.0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,095 | INFO     | sum of deviations: -67455105491.50001
[2025-07-28 16:22:21] 2025-07-28 14:21:49,095 | INFO     | mean x: 1753705506.5
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | mean y: 2579820.283653846
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | -- intersect: 42397429618.897224
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | intersect: 42397429618.897224
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | chi2: 0.208143415939199
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | -- intersect: 42397429618.897224
[2025-07-28 16:22:21] 2025-07-28 14:21:49,096 | INFO     | current memory leak: -24.17 B/s (using 208 data points, chi2=0.21)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,097 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,097 | INFO     | ..............................
[2025-07-28 16:22:21] 2025-07-28 14:21:49,097 | INFO     | . Timing measurements:
[2025-07-28 16:22:21] 2025-07-28 14:21:49,097 | INFO     | . get job = 0 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . initial setup = 1 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . payload setup = 12 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . stage-in = 0 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . payload execution = 14537 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . stage-out = 1 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | . log creation = 0 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,098 | INFO     | ..............................
[2025-07-28 16:22:21] 2025-07-28 14:21:49,383 | INFO     | 
[2025-07-28 16:22:21] 2025-07-28 14:21:49,383 | INFO     | job summary report
[2025-07-28 16:22:21] 2025-07-28 14:21:49,383 | INFO     | --------------------------------------------------
[2025-07-28 16:22:21] 2025-07-28 14:21:49,383 | INFO     | PanDA job id: 6747413021
[2025-07-28 16:22:21] 2025-07-28 14:21:49,383 | INFO     | task id: 45743349
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | errors: (none)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | pilot state: finished 
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | transexitcode: 0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | exeerrorcode: 0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | exeerrordiag: 
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | exitcode: 0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | exitmsg: OK
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | cpuconsumptiontime: 56287 s
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | nevents: 400
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | neventsw: 0
[2025-07-28 16:22:21] 2025-07-28 14:21:49,384 | INFO     | pid: 1357
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | pgrp: 1357
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | corecount: 8
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | event service: False
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | sizes: {0: 2397302, 1: 2397501, 7: 2397763, 12: 2397791, 14554: 2428015, 14556: 2431449, 14558: 2431633, 14568: 2431827}
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | --------------------------------------------------
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | 
[2025-07-28 16:22:21] 2025-07-28 14:21:49,385 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-07-28 16:22:21] 2025-07-28 14:21:49,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:22:21] 2025-07-28 14:21:49,423 | INFO     | job 6747413021 has completed (purged errors)
[2025-07-28 16:22:21] 2025-07-28 14:21:49,423 | INFO     | overall cleanup function is called
[2025-07-28 16:22:21] 2025-07-28 14:21:50,431 | INFO     | --- collectZombieJob: --- 10, [1357]
[2025-07-28 16:22:21] 2025-07-28 14:21:50,431 | INFO     | zombie collector waiting for pid 1357
[2025-07-28 16:22:21] 2025-07-28 14:21:50,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:22:21] 2025-07-28 14:21:50,431 | INFO     | collected zombie processes
[2025-07-28 16:22:21] 2025-07-28 14:21:50,431 | INFO     | will attempt to kill all subprocesses of pid=1357
[2025-07-28 16:22:21] 2025-07-28 14:21:50,531 | INFO     | process IDs to be killed: [1357] (in reverse order)
[2025-07-28 16:22:21] 2025-07-28 14:21:50,678 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:22:21] 2025-07-28 14:21:50,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:22:21] 2025-07-28 14:21:50,682 | INFO     | did not find any defunct processes belonging to 1357
[2025-07-28 16:22:21] 2025-07-28 14:21:50,685 | INFO     | did not find any defunct processes belonging to 1357
[2025-07-28 16:22:21] 2025-07-28 14:21:50,685 | INFO     | ready for new job
[2025-07-28 16:22:21] 2025-07-28 14:21:50,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:22:21] 2025-07-28 14:21:50,687 | INFO     | ***************************************
[2025-07-28 16:22:21] 2025-07-28 14:21:50,687 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:22:21] 2025-07-28 14:21:50,688 | INFO     | ***************************************
[2025-07-28 16:22:21] 2025-07-28 14:21:50,688 | INFO     | 
[2025-07-28 16:22:21] 2025-07-28 14:21:50,688 | INFO     | pilot is running in a VM
[2025-07-28 16:22:21] 2025-07-28 14:21:50,688 | INFO     | architecture information:
[2025-07-28 16:22:21] 2025-07-28 14:21:50,689 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:22:21] 2025-07-28 14:21:50,708 | INFO     | cat /etc/os-release:
[2025-07-28 16:22:21] NAME="CentOS Linux"
[2025-07-28 16:22:21] VERSION="7 (Core)"
[2025-07-28 16:22:21] ID="centos"
[2025-07-28 16:22:21] ID_LIKE="rhel fedora"
[2025-07-28 16:22:21] VERSION_ID="7"
[2025-07-28 16:22:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:22:21] ANSI_COLOR="0;31"
[2025-07-28 16:22:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:22:21] HOME_URL="https://www.centos.org/"
[2025-07-28 16:22:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:22:21] 
[2025-07-28 16:22:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:22:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:22:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:22:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:22:21] 
[2025-07-28 16:22:21] 2025-07-28 14:21:50,709 | INFO     | ***************************************
[2025-07-28 16:22:21] 2025-07-28 14:21:51,212 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-07-28 16:22:21] 2025-07-28 14:21:51,240 | INFO     | sufficient remaining disk space (497082695680 B)
[2025-07-28 16:22:21] 2025-07-28 14:21:51,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:22:21] 2025-07-28 14:21:51,241 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:22:21] 2025-07-28 14:21:51,241 | INFO     | update_server=False
[2025-07-28 16:22:21] 2025-07-28 14:21:51,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:22:21] 2025-07-28 14:21:51,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:22:21] 2025-07-28 14:21:51,547 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 16:22:21] 2025-07-28 14:21:51,547 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 16:22:21] 2025-07-28 14:21:51,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:22:21] 2025-07-28 14:21:51,547 | INFO     | will abort loop
[2025-07-28 16:22:21] 2025-07-28 14:21:51,551 | INFO     | all data control threads have been joined
[2025-07-28 16:22:21] 2025-07-28 14:21:51,853 | INFO     | all job control threads have been joined
[2025-07-28 16:22:21] 2025-07-28 14:21:51,974 | INFO     | all payload control threads have been joined
[2025-07-28 16:22:21] 2025-07-28 14:21:52,247 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,375 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,401 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,551 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,556 | INFO     | [data] control thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,766 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,856 | INFO     | [job] control thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:52,978 | INFO     | [payload] control thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,155 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,165 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,245 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,672 | INFO     | [job] validate thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:53,729 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:54,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:22:21] 2025-07-28 14:21:54,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:22:21] 2025-07-28 14:21:55,233 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:58,214 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:22:21] 2025-07-28 14:21:58,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884723496768)>', '<ExcThread(monitor, started 139884417226496)>']
[2025-07-28 16:22:21] 2025-07-28 14:22:03,608 | INFO     | all workflow threads have been joined
[2025-07-28 16:22:21] 2025-07-28 14:22:03,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:22:21] 2025-07-28 14:22:03,608 | INFO     | traces error code: 0
[2025-07-28 16:22:21] 2025-07-28 14:22:03,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:22:21] 2025-07-28 14:22:21,037 | INFO     | PID=27219 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 16:22:21] 2025-07-28 14:22:21,038 | INFO     | .. there are 8 such processes running
[2025-07-28 16:22:21] 2025-07-28 14:22:21,039 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:22:21] 2025-07-28 14:22:21,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:22:21] 2025-07-28 14:22:21,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:22:21] 2025-07-28 14:22:21,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:22:21] 2025-07-28 14:22:21,040 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 16:22:21] 2025-07-28 14:22:21,040 | INFO     | [monitor] control thread has ended
[2025-07-28 16:22:21] 2025-07-28 14:22:21,335 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:22:21] 2025-07-28 14:22:21,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:22:21] 2025-07-28 14:22:21,389 [wrapper] pilotpid: 27219
[2025-07-28 16:22:21] 2025-07-28 14:22:21,420 [wrapper] Pilot exit status: 0
[2025-07-28 16:22:21] 2025-07-28 14:22:21,485 [wrapper] pandaids: 6747413021
[2025-07-28 16:22:21] 2025-07-28 14:22:21,549 [wrapper] cleanup supervisor_pilot  1152 27220
[2025-07-28 16:22:21] 2025-07-28 14:22:21,552 [wrapper] Test setup, not cleaning
[2025-07-28 16:22:21] 2025-07-28 14:22:21,635 [wrapper] apfmon messages muted
[2025-07-28 16:22:21] 2025-07-28 14:22:21,644 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:22:21] 2025-07-28 14:22:21,659 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:22:21]  *** Error codes and diagnostics ***
[2025-07-28 16:22:21]     "exeErrorCode": 0,
[2025-07-28 16:22:21]     "exeErrorDiag": "",
[2025-07-28 16:22:21]     "pilotErrorCode": 0,
[2025-07-28 16:22:21]     "pilotErrorDiag": "",
[2025-07-28 16:22:21]  *** Listing of results directory ***
[2025-07-28 16:22:21] total 355420
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc    530466 Jul 27 16:11 pilot3.tar.gz
[2025-07-28 16:22:21] -rwx------. 1 boinc boinc     36292 Jul 27 16:19 runpilot2-wrapper.sh
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc      5112 Jul 27 16:19 queuedata.json
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc       100 Jul 28 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:22:21] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 12:18 run_atlas
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc       105 Jul 28 12:18 job.xml
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc 145641863 Jul 28 12:18 EVNT.45743347._002774.pool.root.1
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:18 start_atlas.sh
[2025-07-28 16:22:21] drwxrwx--x. 2 boinc boinc        68 Jul 28 12:18 shared
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc    542887 Jul 28 12:18 input.tar.gz
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc      6393 Jul 28 12:18 init_data.xml
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc         0 Jul 28 12:18 boinc_lockfile
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc      2561 Jul 28 12:18 pandaJob.out
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc    978460 Jul 28 12:18 agis_schedconf.cvmfs.json
[2025-07-28 16:22:21] drwx------. 4 boinc boinc      4096 Jul 28 12:18 pilot3
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc 211170294 Jul 28 16:20 HITS.45743349._049904.pool.root.1
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc       530 Jul 28 16:21 boinc_task_state.xml
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc      1018 Jul 28 16:21 memory_monitor_summary.json
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc   1589827 Jul 28 16:21 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc    379220 Jul 28 16:21 log.45743349._049904.job.log.tgz.1
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc      7775 Jul 28 16:21 heartbeat.json
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc      8192 Jul 28 16:22 boinc_mmap_file
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc        28 Jul 28 16:22 wrapper_checkpoint.txt
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc        95 Jul 28 16:22 pilot_heartbeat.json
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc       890 Jul 28 16:22 pilotlog.txt
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc   1258828 Jul 28 16:22 log.45743349._049904.job.log.1
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc       357 Jul 28 16:22 output.list
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc       620 Jul 28 16:22 runtime_log
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc   1658880 Jul 28 16:22 result.tar.gz
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc       657 Jul 28 16:22 tLjKDm5OH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmaf2KDmWOjYNn.diag
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc      8674 Jul 28 16:22 runtime_log.err
[2025-07-28 16:22:21] -rw-r--r--. 1 boinc boinc     20598 Jul 28 16:22 stderr.txt
[2025-07-28 16:22:21] HITS file was successfully produced:
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc 211170294 Jul 28 16:20 shared/HITS.pool.root.1
[2025-07-28 16:22:21]  *** Contents of shared directory: ***
[2025-07-28 16:22:21] total 350624
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc 145641863 Jul 28 12:18 ATLAS.root_0
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:18 start_atlas.sh
[2025-07-28 16:22:21] -rw-r--r--. 2 boinc boinc    542887 Jul 28 12:18 input.tar.gz
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc 211170294 Jul 28 16:20 HITS.pool.root.1
[2025-07-28 16:22:21] -rw-------. 1 boinc boinc   1658880 Jul 28 16:22 result.tar.gz
16:22:23 (23207): run_atlas exited; CPU time 56449.406257
16:22:23 (23207): called boinc_finish(0)

</stderr_txt>
]]>

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