Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:35 (31138): wrapper (7.7.26015): starting
15:32:35 (31138): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 15:32:35] Arguments: --nthreads 12
[2025-07-27 15:32:35] Threads: 12
[2025-07-27 15:32:35] Checking for CVMFS
[2025-07-27 15:32:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:32:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:32:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:32:35] 2.11.2.0 2998 112380 102360 148822 0 57 14715543 20275200 1 130560 0 38772640 99.971 9731538 11016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 15:32:35] CVMFS is ok
[2025-07-27 15:32:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:32:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:32:35] Further information can be found at the LHC@home message board.
[2025-07-27 15:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:32:35] Checking for apptainer binary...
[2025-07-27 15:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:32:35] Running /usr/bin/apptainer --version
[2025-07-27 15:32:35] apptainer version 1.3.2-1.el7
[2025-07-27 15:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:32:36] c-205-25.aglt2.org
[2025-07-27 15:32:36] apptainer works
[2025-07-27 15:32:36] Set ATHENA_PROC_NUMBER=12
[2025-07-27 15:32:36] Set ATHENA_CORE_NUMBER=12
[2025-07-27 15:32:37] Starting ATLAS job with PandaID=6747413285
[2025-07-27 15:32:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:58:28]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:58:28]  protocol_id=None
[2025-07-27 16:58:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:58:28]  replicas=None
[2025-07-27 16:58:28]  scope=mc23_13p6TeV
[2025-07-27 16:58:28]  status=None
[2025-07-27 16:58:28]  status_code=0
[2025-07-27 16:58:28]  storage_token=
[2025-07-27 16:58:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747413285/log.45743349._050059.job.log.tgz.1
[2025-07-27 16:58:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/91/log.45743349._050059.job.log.tgz.1
[2025-07-27 16:58:28]  workdir=None
[2025-07-27 16:58:28] ]
[2025-07-27 16:58:28] 2025-07-27 20:57:45,313 | INFO     | transferring file log.45743349._050059.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747413285/log.45743349._050059.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:58:28] 2025-07-27 20:57:45,313 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747413285/log.45743349._050059.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._050059.job
[2025-07-27 16:58:28] 2025-07-27 20:57:45,335 | INFO     | adding to output.list: log.45743349._050059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/91/log.45743349._050059.job.log.tg
[2025-07-27 16:58:28] 2025-07-27 20:57:45,336 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:58:28] 2025-07-27 20:57:45,336 | INFO     | summary of transferred files:
[2025-07-27 16:58:28] 2025-07-27 20:57:45,336 | INFO     |  -- lfn=log.45743349._050059.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:58:28] 2025-07-27 20:57:45,336 | INFO     | stage-out finished correctly
[2025-07-27 16:58:28] 2025-07-27 20:57:45,857 | INFO     | monitor loop #381: job 0:6747413285 is in state 'finished'
[2025-07-27 16:58:28] 2025-07-27 20:57:45,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:58:28] 2025-07-27 20:57:48,360 | INFO     | monitor loop #382: job 0:6747413285 is in state 'finished'
[2025-07-27 16:58:28] 2025-07-27 20:57:48,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:58:28] 2025-07-27 20:57:48,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:58:28] 2025-07-27 20:57:50,078 | INFO     | job 6747413285 has state=finished
[2025-07-27 16:58:28] 2025-07-27 20:57:50,079 | INFO     | preparing for final server update for job 6747413285 in state='finished'
[2025-07-27 16:58:28] 2025-07-27 20:57:50,079 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:58:28] 2025-07-27 20:57:50,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:58:28] 2025-07-27 20:57:50,079 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:58:28] 2025-07-27 20:57:50,080 | INFO     | job 6747413285 has finished - writing final server update
[2025-07-27 16:58:28] 2025-07-27 20:57:50,080 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:58:28] 2025-07-27 20:57:50,081 | INFO     | executing command: lscpu
[2025-07-27 16:58:28] 2025-07-27 20:57:50,107 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:58:28] 2025-07-27 20:57:50,872 | INFO     | monitor loop #383: job 0:6747413285 is in state 'finished'
[2025-07-27 16:58:28] 2025-07-27 20:57:50,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:58:28] 2025-07-27 20:57:53,375 | INFO     | monitor loop #384: job 0:6747413285 is in state 'finished'
[2025-07-27 16:58:28] 2025-07-27 20:57:53,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:58:28] 2025-07-27 20:57:53,746 | INFO     | PID=2426 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 16:58:28] 2025-07-27 20:57:54,941 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 16:58:28] 2025-07-27 20:57:54,944 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-27 16:58:28] 2025-07-27 20:57:54,946 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747413285/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:58:28] 2025-07-27 20:57:54,947 | INFO     | extracted standard info from prmon json
[2025-07-27 16:58:28] 2025-07-27 20:57:54,947 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:58:28] 2025-07-27 20:57:54,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:58:28] 2025-07-27 20:57:54,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:58:28] 2025-07-27 20:57:54,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:58:28] 2025-07-27 20:57:54,949 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:58:28] 2025-07-27 20:57:54,949 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 16:58:28] 2025-07-27 20:57:54,949 | INFO     | sum of deviations: -9966105732.5
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | mean x: 1753647393.5
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | mean y: 2812873.960526316
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | -- intersect: 128420179427.89906
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | intersect: 128420179427.89906
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | chi2: 0.0968870162990784
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | -- intersect: 128420179427.89906
[2025-07-27 16:58:28] 2025-07-27 20:57:54,950 | INFO     | current memory leak: -73.23 B/s (using 76 data points, chi2=0.10)
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | ..............................
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | . Timing measurements:
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | . get job = 0 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | . initial setup = 2 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | . payload setup = 9 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,951 | INFO     | . stage-in = 0 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,952 | INFO     | . payload execution = 5064 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,952 | INFO     | . stage-out = 0 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,952 | INFO     | . log creation = 0 s
[2025-07-27 16:58:28] 2025-07-27 20:57:54,952 | INFO     | ..............................
[2025-07-27 16:58:28] 2025-07-27 20:57:55,285 | INFO     | 
[2025-07-27 16:58:28] 2025-07-27 20:57:55,285 | INFO     | job summary report
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | --------------------------------------------------
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | PanDA job id: 6747413285
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | task id: 45743349
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | errors: (none)
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:58:28] 2025-07-27 20:57:55,286 | INFO     | pilot state: finished 
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | transexitcode: 0
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | exeerrorcode: 0
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | exeerrordiag: 
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | exitcode: 0
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | exitmsg: OK
[2025-07-27 16:58:28] 2025-07-27 20:57:55,287 | INFO     | cpuconsumptiontime: 54290 s
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | nevents: 400
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | neventsw: 0
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | pid: 8937
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | pgrp: 8937
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | corecount: 12
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | event service: False
[2025-07-27 16:58:28] 2025-07-27 20:57:55,288 | INFO     | sizes: {0: 2397302, 1: 2397501, 5: 2397763, 11: 2397819, 5077: 2424120, 5078: 2424119, 5080: 2433301, 5083: 2433357, 5089: 2433551}
[2025-07-27 16:58:28] 2025-07-27 20:57:55,289 | INFO     | --------------------------------------------------
[2025-07-27 16:58:28] 2025-07-27 20:57:55,289 | INFO     | 
[2025-07-27 16:58:28] 2025-07-27 20:57:55,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:58:28] 2025-07-27 20:57:55,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:58:28] 2025-07-27 20:57:55,317 | INFO     | job 6747413285 has completed (purged errors)
[2025-07-27 16:58:28] 2025-07-27 20:57:55,318 | INFO     | overall cleanup function is called
[2025-07-27 16:58:28] 2025-07-27 20:57:56,325 | INFO     | --- collectZombieJob: --- 10, [8937]
[2025-07-27 16:58:28] 2025-07-27 20:57:56,325 | INFO     | zombie collector waiting for pid 8937
[2025-07-27 16:58:28] 2025-07-27 20:57:56,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:58:28] 2025-07-27 20:57:56,325 | INFO     | collected zombie processes
[2025-07-27 16:58:28] 2025-07-27 20:57:56,325 | INFO     | will attempt to kill all subprocesses of pid=8937
[2025-07-27 16:58:28] 2025-07-27 20:57:56,417 | INFO     | process IDs to be killed: [8937] (in reverse order)
[2025-07-27 16:58:28] 2025-07-27 20:57:56,468 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:58:28] 2025-07-27 20:57:56,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:58:28] 2025-07-27 20:57:56,472 | INFO     | did not find any defunct processes belonging to 8937
[2025-07-27 16:58:28] 2025-07-27 20:57:56,475 | INFO     | did not find any defunct processes belonging to 8937
[2025-07-27 16:58:28] 2025-07-27 20:57:56,476 | INFO     | ready for new job
[2025-07-27 16:58:28] 2025-07-27 20:57:56,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:58:28] 2025-07-27 20:57:56,477 | INFO     | ***************************************
[2025-07-27 16:58:28] 2025-07-27 20:57:56,477 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:58:28] 2025-07-27 20:57:56,477 | INFO     | ***************************************
[2025-07-27 16:58:28] 2025-07-27 20:57:56,477 | INFO     | 
[2025-07-27 16:58:28] 2025-07-27 20:57:56,478 | INFO     | architecture information:
[2025-07-27 16:58:28] 2025-07-27 20:57:56,478 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:58:28] 2025-07-27 20:57:56,494 | INFO     | cat /etc/os-release:
[2025-07-27 16:58:28] NAME="CentOS Linux"
[2025-07-27 16:58:28] VERSION="7 (Core)"
[2025-07-27 16:58:28] ID="centos"
[2025-07-27 16:58:28] ID_LIKE="rhel fedora"
[2025-07-27 16:58:28] VERSION_ID="7"
[2025-07-27 16:58:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:58:28] ANSI_COLOR="0;31"
[2025-07-27 16:58:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:58:28] HOME_URL="https://www.centos.org/"
[2025-07-27 16:58:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:58:28] 
[2025-07-27 16:58:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:58:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:58:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:58:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:58:28] 
[2025-07-27 16:58:28] 2025-07-27 20:57:56,494 | INFO     | ***************************************
[2025-07-27 16:58:28] 2025-07-27 20:57:56,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:58:28] 2025-07-27 20:57:57,014 | INFO     | sufficient remaining disk space (29510074368 B)
[2025-07-27 16:58:28] 2025-07-27 20:57:57,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:58:28] 2025-07-27 20:57:57,014 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:58:28] 2025-07-27 20:57:57,015 | INFO     | update_server=False
[2025-07-27 16:58:28] 2025-07-27 20:57:57,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:58:28] 2025-07-27 20:57:57,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:58:28] 2025-07-27 20:57:57,015 | INFO     | aborting loop
[2025-07-27 16:58:28] 2025-07-27 20:57:57,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:58:28] 2025-07-27 20:57:57,269 | INFO     | all data control threads have been joined
[2025-07-27 16:58:28] 2025-07-27 20:57:57,518 | INFO     | all payload control threads have been joined
[2025-07-27 16:58:28] 2025-07-27 20:57:58,016 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,020 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,021 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,122 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,266 | INFO     | all job control threads have been joined
[2025-07-27 16:58:28] 2025-07-27 20:57:58,273 | INFO     | [data] control thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,330 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:58:28] 2025-07-27 20:57:58,481 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,524 | INFO     | [payload] control thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,768 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,905 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:58,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:58:28] 2025-07-27 20:57:59,006 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:59,272 | INFO     | [job] control thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:57:59,320 | INFO     | [job] validate thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:58:00,444 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:58:02,981 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:58:07,794 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:58:28] 2025-07-27 20:58:08,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:58:28] 2025-07-27 20:58:09,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414621271872)>', '<ExcThread(monitor, started 140414199777024)>']
[2025-07-27 16:58:28] 2025-07-27 20:58:15,020 | INFO     | all workflow threads have been joined
[2025-07-27 16:58:28] 2025-07-27 20:58:15,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:58:28] 2025-07-27 20:58:15,020 | INFO     | traces error code: 0
[2025-07-27 16:58:28] 2025-07-27 20:58:15,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:58:28] 2025-07-27 20:58:27,940 | INFO     | PID=2426 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 16:58:28] 2025-07-27 20:58:27,940 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:58:28] 2025-07-27 20:58:27,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:58:28] 2025-07-27 20:58:27,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:58:28] 2025-07-27 20:58:27,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:58:28] 2025-07-27 20:58:27,941 | INFO     | [monitor] control thread has ended
[2025-07-27 16:58:28] 2025-07-27 20:58:28,023 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:58:28] 2025-07-27 20:58:28,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:58:28] 2025-07-27 20:58:28,029 [wrapper] pilotpid: 2426
[2025-07-27 16:58:28] 2025-07-27 20:58:28,033 [wrapper] Pilot exit status: 0
[2025-07-27 16:58:28] 2025-07-27 20:58:28,047 [wrapper] pandaids: 6747413285
[2025-07-27 16:58:28] 2025-07-27 20:58:28,085 [wrapper] cleanup supervisor_pilot 30767 2427
[2025-07-27 16:58:28] 2025-07-27 20:58:28,088 [wrapper] Test setup, not cleaning
[2025-07-27 16:58:28] 2025-07-27 20:58:28,092 [wrapper] apfmon messages muted
[2025-07-27 16:58:28] 2025-07-27 20:58:28,095 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:58:28] 2025-07-27 20:58:28,099 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:58:28]  *** Error codes and diagnostics ***
[2025-07-27 16:58:28]     "exeErrorCode": 0,
[2025-07-27 16:58:28]     "exeErrorDiag": "",
[2025-07-27 16:58:28]     "pilotErrorCode": 0,
[2025-07-27 16:58:28]     "pilotErrorDiag": "",
[2025-07-27 16:58:28]  *** Listing of results directory ***
[2025-07-27 16:58:28] total 359412
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 10:29 queuedata.json
[2025-07-27 16:58:28] -rwx------ 1 boincer umatlas     36292 Jul 27 10:30 runpilot2-wrapper.sh
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas       100 Jul 27 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:58:28] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 15:32 run_atlas
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas       105 Jul 27 15:32 job.xml
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas 146063967 Jul 27 15:32 EVNT.45743347._002784.pool.root.1
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 15:32 start_atlas.sh
[2025-07-27 16:58:28] drwxrwx--x 2 boincer umatlas      4096 Jul 27 15:32 shared
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 15:32 input.tar.gz
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas         0 Jul 27 15:32 boinc_lockfile
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 15:32 pandaJob.out
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas    980125 Jul 27 15:32 agis_schedconf.cvmfs.json
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas   1593052 Jul 27 15:32 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:58:28] drwx------ 4 boincer umatlas      4096 Jul 27 15:32 pilot3
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas       529 Jul 27 16:57 boinc_task_state.xml
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas 216422379 Jul 27 16:57 HITS.45743349._050059.pool.root.1
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 16:57 init_data.xml
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas      1050 Jul 27 16:57 memory_monitor_summary.json
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas    356807 Jul 27 16:57 log.45743349._050059.job.log.tgz.1
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas      7856 Jul 27 16:57 heartbeat.json
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas        95 Jul 27 16:57 pilot_heartbeat.json
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 16:58 boinc_mmap_file
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas        27 Jul 27 16:58 wrapper_checkpoint.txt
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas       744 Jul 27 16:58 pilotlog.txt
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas    483171 Jul 27 16:58 log.45743349._050059.job.log.1
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas       357 Jul 27 16:58 output.list
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas       620 Jul 27 16:58 runtime_log
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas    860160 Jul 27 16:58 result.tar.gz
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 16:58 runtime_log.err
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas       659 Jul 27 16:58 FwwLDmCZH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmZg2KDmuJ6pYm.diag
[2025-07-27 16:58:28] -rw-r--r-- 1 boincer umatlas     21917 Jul 27 16:58 stderr.txt
[2025-07-27 16:58:28] HITS file was successfully produced:
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas 216422379 Jul 27 16:57 shared/HITS.pool.root.1
[2025-07-27 16:58:28]  *** Contents of shared directory: ***
[2025-07-27 16:58:28] total 355384
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas 146063967 Jul 27 15:32 ATLAS.root_0
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 15:32 start_atlas.sh
[2025-07-27 16:58:28] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 15:32 input.tar.gz
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas 216422379 Jul 27 16:57 HITS.pool.root.1
[2025-07-27 16:58:28] -rw------- 1 boincer umatlas    860160 Jul 27 16:58 result.tar.gz
16:58:29 (31138): run_atlas exited; CPU time 54247.730821
16:58:29 (31138): called boinc_finish(0)

</stderr_txt>
]]>

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