Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:46 (47747): wrapper (7.7.26015): starting
15:45:46 (47747): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:45:46] Arguments: --nthreads 8
[2025-07-27 15:45:46] Threads: 8
[2025-07-27 15:45:46] Checking for CVMFS
[2025-07-27 15:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:45:46] 2.11.2.0 39542 213956 374932 148822 3 188 14238433 18432000 3666 130560 0 179195355 99.357 268846808 40342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 15:45:46] CVMFS is ok
[2025-07-27 15:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:45:46] Further information can be found at the LHC@home message board.
[2025-07-27 15:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:45:46] Checking for apptainer binary...
[2025-07-27 15:45:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:45:46] Running /usr/bin/apptainer --version
[2025-07-27 15:45:47] apptainer version 1.3.2-1.el7
[2025-07-27 15:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:45:47] c-211-25.aglt2.org
[2025-07-27 15:45:47] apptainer works
[2025-07-27 15:45:47] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:45:47] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:45:47] Starting ATLAS job with PandaID=6747413225
[2025-07-27 15:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:59:55]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:59:55] 2025-07-27 22:59:21,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:59:55] 2025-07-27 22:59:21,633 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:59:55] 2025-07-27 22:59:21,634 | INFO     | sum of square deviations: 2126802667.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | sum of deviations: 26788982802.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | mean x: 1753651349.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | mean y: 2476033.594736842
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | -- intersect: -22086331997.927265
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | intersect: -22086331997.927265
[2025-07-27 18:59:55] 2025-07-27 22:59:21,635 | INFO     | chi2: 1.4842051881262324
[2025-07-27 18:59:55] 2025-07-27 22:59:21,636 | INFO     | sum of square deviations: 1963274020.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,636 | INFO     | sum of deviations: 26007232636.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,636 | INFO     | mean x: 1753651197.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | mean y: 2475305.1513513513
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | -- intersect: -23227911374.533264
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | intersect: -23227911374.533264
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | chi2: 1.4851883694204944
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | current chi2=1.4851883694204944 (change=-0.06624294956839777 %)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | right removable region: 184
[2025-07-27 18:59:55] 2025-07-27 22:59:21,637 | INFO     | sum of square deviations: 1963274020.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,638 | INFO     | sum of deviations: -2852684886.0000005
[2025-07-27 18:59:55] 2025-07-27 22:59:21,638 | INFO     | mean x: 1753651502.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,638 | INFO     | mean y: 2503376.5783783784
[2025-07-27 18:59:55] 2025-07-27 22:59:21,639 | INFO     | -- intersect: 2550601647.173636
[2025-07-27 18:59:55] 2025-07-27 22:59:21,639 | INFO     | intersect: 2550601647.173636
[2025-07-27 18:59:55] 2025-07-27 22:59:21,639 | INFO     | chi2: 0.055578467704889764
[2025-07-27 18:59:55] 2025-07-27 22:59:21,639 | INFO     | current chi2=0.055578467704889764 (change=96.25533799844372 %)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,639 | INFO     | sum of square deviations: 1808350185.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,641 | INFO     | sum of deviations: -6577513490.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,641 | INFO     | mean x: 1753651654.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,641 | INFO     | mean y: 2506992.6333333333
[2025-07-27 18:59:55] 2025-07-27 22:59:21,641 | INFO     | -- intersect: 6381065476.445233
[2025-07-27 18:59:55] 2025-07-27 22:59:21,641 | INFO     | intersect: 6381065476.445233
[2025-07-27 18:59:55] 2025-07-27 22:59:21,642 | INFO     | chi2: 0.024089721859418264
[2025-07-27 18:59:55] 2025-07-27 22:59:21,642 | INFO     | current chi2=0.024089721859418264 (change=56.656376373437034 %)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,642 | INFO     | sum of square deviations: 1661798600.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,644 | INFO     | sum of deviations: -4673755462.000001
[2025-07-27 18:59:55] 2025-07-27 22:59:21,644 | INFO     | mean x: 1753651807.0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,644 | INFO     | mean y: 2505004.805714286
[2025-07-27 18:59:55] 2025-07-27 22:59:21,644 | INFO     | -- intersect: 4934594676.449692
[2025-07-27 18:59:55] 2025-07-27 22:59:21,644 | INFO     | intersect: 4934594676.449692
[2025-07-27 18:59:55] 2025-07-27 22:59:21,645 | INFO     | chi2: 0.02179102304915113
[2025-07-27 18:59:55] 2025-07-27 22:59:21,645 | INFO     | current chi2=0.02179102304915113 (change=9.542238900398178 %)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,645 | INFO     | left removable region: 30
[2025-07-27 18:59:55] 2025-07-27 22:59:21,645 | INFO     | sum of square deviations: 1132458442.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,646 | INFO     | sum of deviations: 1673828135.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | mean x: 1753652081.5
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | mean y: 2497349.201298701
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | -- intersect: -2589484911.4571
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | intersect: -2589484911.4571
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | chi2: 0.0004046901207095321
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | -- intersect: -2589484911.4571
[2025-07-27 18:59:55] 2025-07-27 22:59:21,647 | INFO     | current memory leak: 1.48 B/s (using 154 data points, chi2=0.00)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | could have reported an average CPU frequency of 2899 MHz (10 samples)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | ..............................
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . Timing measurements:
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . get job = 0 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . initial setup = 2 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . payload setup = 6 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . stage-in = 0 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,648 | INFO     | . payload execution = 11569 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,649 | INFO     | . stage-out = 2 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,649 | INFO     | . log creation = 0 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,649 | INFO     | ..............................
[2025-07-27 18:59:55] 2025-07-27 22:59:21,729 | INFO     | 
[2025-07-27 18:59:55] 2025-07-27 22:59:21,729 | INFO     | job summary report
[2025-07-27 18:59:55] 2025-07-27 22:59:21,729 | INFO     | --------------------------------------------------
[2025-07-27 18:59:55] 2025-07-27 22:59:21,729 | INFO     | PanDA job id: 6747413225
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | task id: 45743349
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | errors: (none)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | pilot state: finished 
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | transexitcode: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | exeerrorcode: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | exeerrordiag: 
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | exitcode: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | exitmsg: OK
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | cpuconsumptiontime: 86825 s
[2025-07-27 18:59:55] 2025-07-27 22:59:21,730 | INFO     | nevents: 400
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | neventsw: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | pid: 9185
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | pgrp: 9185
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | corecount: 8
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | event service: False
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | sizes: {0: 2397248, 1: 2397503, 5: 2397765, 12: 2397821, 11580: 2427195, 11583: 2436377, 11589: 2436543}
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | --------------------------------------------------
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | 
[2025-07-27 18:59:55] 2025-07-27 22:59:21,731 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 18:59:55] 2025-07-27 22:59:21,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:59:55] 2025-07-27 22:59:21,748 | INFO     | job 6747413225 has completed (purged errors)
[2025-07-27 18:59:55] 2025-07-27 22:59:21,748 | INFO     | overall cleanup function is called
[2025-07-27 18:59:55] 2025-07-27 22:59:22,493 | INFO     | PID=2673 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 18:59:55] 2025-07-27 22:59:22,494 | INFO     | .. there are 5 such processes running
[2025-07-27 18:59:55] 2025-07-27 22:59:22,756 | INFO     | --- collectZombieJob: --- 10, [9185]
[2025-07-27 18:59:55] 2025-07-27 22:59:22,757 | INFO     | zombie collector waiting for pid 9185
[2025-07-27 18:59:55] 2025-07-27 22:59:22,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:59:55] 2025-07-27 22:59:22,757 | INFO     | collected zombie processes
[2025-07-27 18:59:55] 2025-07-27 22:59:22,757 | INFO     | will attempt to kill all subprocesses of pid=9185
[2025-07-27 18:59:55] 2025-07-27 22:59:22,989 | INFO     | process IDs to be killed: [9185] (in reverse order)
[2025-07-27 18:59:55] 2025-07-27 22:59:23,041 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:59:55] 2025-07-27 22:59:23,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:59:55] 2025-07-27 22:59:23,046 | INFO     | did not find any defunct processes belonging to 9185
[2025-07-27 18:59:55] 2025-07-27 22:59:23,049 | INFO     | did not find any defunct processes belonging to 9185
[2025-07-27 18:59:55] 2025-07-27 22:59:23,049 | INFO     | ready for new job
[2025-07-27 18:59:55] 2025-07-27 22:59:23,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:59:55] 2025-07-27 22:59:23,051 | INFO     | ***************************************
[2025-07-27 18:59:55] 2025-07-27 22:59:23,051 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:59:55] 2025-07-27 22:59:23,051 | INFO     | ***************************************
[2025-07-27 18:59:55] 2025-07-27 22:59:23,051 | INFO     | 
[2025-07-27 18:59:55] 2025-07-27 22:59:23,052 | INFO     | architecture information:
[2025-07-27 18:59:55] 2025-07-27 22:59:23,053 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:59:55] 2025-07-27 22:59:23,062 | INFO     | cat /etc/os-release:
[2025-07-27 18:59:55] NAME="CentOS Linux"
[2025-07-27 18:59:55] VERSION="7 (Core)"
[2025-07-27 18:59:55] ID="centos"
[2025-07-27 18:59:55] ID_LIKE="rhel fedora"
[2025-07-27 18:59:55] VERSION_ID="7"
[2025-07-27 18:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:59:55] ANSI_COLOR="0;31"
[2025-07-27 18:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:59:55] HOME_URL="https://www.centos.org/"
[2025-07-27 18:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:59:55] 
[2025-07-27 18:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:59:55] 
[2025-07-27 18:59:55] 2025-07-27 22:59:23,063 | INFO     | ***************************************
[2025-07-27 18:59:55] 2025-07-27 22:59:23,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 18:59:55] 2025-07-27 22:59:23,588 | INFO     | sufficient remaining disk space (56159633408 B)
[2025-07-27 18:59:55] 2025-07-27 22:59:23,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:59:55] 2025-07-27 22:59:23,589 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:59:55] 2025-07-27 22:59:23,589 | INFO     | update_server=False
[2025-07-27 18:59:55] 2025-07-27 22:59:23,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:59:55] 2025-07-27 22:59:23,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:59:55] 2025-07-27 22:59:23,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:59:55] 2025-07-27 22:59:23,590 | INFO     | aborting loop
[2025-07-27 18:59:55] 2025-07-27 22:59:23,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:59:55] 2025-07-27 22:59:23,624 | INFO     | all data control threads have been joined
[2025-07-27 18:59:55] 2025-07-27 22:59:24,335 | INFO     | all job control threads have been joined
[2025-07-27 18:59:55] 2025-07-27 22:59:24,533 | INFO     | all payload control threads have been joined
[2025-07-27 18:59:55] 2025-07-27 22:59:24,595 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:24,596 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:24,596 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:24,630 | INFO     | [data] control thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:24,887 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,125 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,275 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,341 | INFO     | [job] control thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,539 | INFO     | [payload] control thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,544 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,595 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,812 | INFO     | [job] validate thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:25,920 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:26,043 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:26,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:59:55] 2025-07-27 22:59:30,367 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:33,746 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:59:55] 2025-07-27 22:59:34,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:59:55] 2025-07-27 22:59:35,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138704320320)>', '<ExcThread(monitor, started 140138122303232)>']
[2025-07-27 18:59:55] 2025-07-27 22:59:40,152 | INFO     | all workflow threads have been joined
[2025-07-27 18:59:55] 2025-07-27 22:59:40,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:59:55] 2025-07-27 22:59:40,153 | INFO     | traces error code: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:40,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:59:55] 2025-07-27 22:59:54,835 | INFO     | PID=2673 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 18:59:55] 2025-07-27 22:59:54,835 | INFO     | .. there are 5 such processes running
[2025-07-27 18:59:55] 2025-07-27 22:59:54,836 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:59:55] 2025-07-27 22:59:54,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:59:55] 2025-07-27 22:59:54,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:59:55] 2025-07-27 22:59:54,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:59:55] 2025-07-27 22:59:54,837 | INFO     | [monitor] control thread has ended
[2025-07-27 18:59:55] 2025-07-27 22:59:54,940 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:59:55] 2025-07-27 22:59:54,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:59:55] 2025-07-27 22:59:54,945 [wrapper] pilotpid: 2673
[2025-07-27 18:59:55] 2025-07-27 22:59:54,947 [wrapper] Pilot exit status: 0
[2025-07-27 18:59:55] 2025-07-27 22:59:54,955 [wrapper] pandaids: 6747413225
[2025-07-27 18:59:55] 2025-07-27 22:59:54,988 [wrapper] cleanup supervisor_pilot  3548 2674
[2025-07-27 18:59:55] 2025-07-27 22:59:54,991 [wrapper] Test setup, not cleaning
[2025-07-27 18:59:55] 2025-07-27 22:59:54,993 [wrapper] apfmon messages muted
[2025-07-27 18:59:55] 2025-07-27 22:59:54,995 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:59:55] 2025-07-27 22:59:54,997 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:59:55]  *** Error codes and diagnostics ***
[2025-07-27 18:59:55]     "exeErrorCode": 0,
[2025-07-27 18:59:55]     "exeErrorDiag": "",
[2025-07-27 18:59:55]     "pilotErrorCode": 0,
[2025-07-27 18:59:55]     "pilotErrorDiag": "",
[2025-07-27 18:59:55]  *** Listing of results directory ***
[2025-07-27 18:59:55] total 345156
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 18:59:55] -rwx------ 1 boincer umatlas     36292 Jul 27 10:23 runpilot2-wrapper.sh
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 10:23 queuedata.json
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas       100 Jul 27 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:59:55] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 15:45 run_atlas
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas       105 Jul 27 15:45 job.xml
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas 146506891 Jul 27 15:45 EVNT.45743347._002780.pool.root.1
[2025-07-27 18:59:55] drwxrwx--x 2 boincer umatlas      4096 Jul 27 15:45 shared
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 15:45 input.tar.gz
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 15:45 start_atlas.sh
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas         0 Jul 27 15:45 boinc_lockfile
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 15:45 pandaJob.out
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas    980125 Jul 27 15:45 agis_schedconf.cvmfs.json
[2025-07-27 18:59:55] drwx------ 4 boincer umatlas      4096 Jul 27 15:45 pilot3
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas      6035 Jul 27 18:57 init_data.xml
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas 200228513 Jul 27 18:58 HITS.45743349._049999.pool.root.1
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas       531 Jul 27 18:58 boinc_task_state.xml
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas      1048 Jul 27 18:59 memory_monitor_summary.json
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas   1593052 Jul 27 18:59 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas    361149 Jul 27 18:59 log.45743349._049999.job.log.tgz.1
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas      7835 Jul 27 18:59 heartbeat.json
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 18:59 boinc_mmap_file
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas        28 Jul 27 18:59 wrapper_checkpoint.txt
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas        95 Jul 27 18:59 pilot_heartbeat.json
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas       819 Jul 27 18:59 pilotlog.txt
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas   1055441 Jul 27 18:59 log.45743349._049999.job.log.1
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas       357 Jul 27 18:59 output.list
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas       620 Jul 27 18:59 runtime_log
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas   1433600 Jul 27 18:59 result.tar.gz
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas      8661 Jul 27 18:59 runtime_log.err
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas       660 Jul 27 18:59 GtzMDmoSH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2XVLDmwvWpan.diag
[2025-07-27 18:59:55] -rw-r--r-- 1 boincer umatlas     20973 Jul 27 18:59 stderr.txt
[2025-07-27 18:59:55] HITS file was successfully produced:
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas 200228513 Jul 27 18:58 shared/HITS.pool.root.1
[2025-07-27 18:59:55]  *** Contents of shared directory: ***
[2025-07-27 18:59:55] total 340564
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas 146506891 Jul 27 15:45 ATLAS.root_0
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas    542886 Jul 27 15:45 input.tar.gz
[2025-07-27 18:59:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 15:45 start_atlas.sh
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas 200228513 Jul 27 18:58 HITS.pool.root.1
[2025-07-27 18:59:55] -rw------- 1 boincer umatlas   1433600 Jul 27 18:59 result.tar.gz
18:59:56 (47747): run_atlas exited; CPU time 87072.139911
18:59:56 (47747): called boinc_finish(0)

</stderr_txt>
]]>

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