Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:33:26 (4128682): wrapper (7.7.26015): starting
15:33:26 (4128682): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:33:26] Arguments: --nthreads 8
[2025-07-27 15:33:26] Threads: 8
[2025-07-27 15:33:26] Checking for CVMFS
[2025-07-27 15:33:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:33:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:33:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:33:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:33:27] 2.12.6.0 3576101 18789 380168 148822 1 412 24609673 40960000 16399 16776704 0 62154381 99.865 68100546 24702 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 15:33:27] CVMFS is ok
[2025-07-27 15:33:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:33:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:33:27] Further information can be found at the LHC@home message board.
[2025-07-27 15:33:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:33:27] Checking for apptainer binary...
[2025-07-27 15:33:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:33:27] Running /usr/bin/apptainer --version
[2025-07-27 15:33:27] apptainer version 1.4.1-1.el9
[2025-07-27 15:33:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:33:27] c7-11-12.aglt2.org
[2025-07-27 15:33:27] apptainer works
[2025-07-27 15:33:27] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:33:27] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:33:27] Starting ATLAS job with PandaID=6747413029
[2025-07-27 15:33:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:00:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:00:33]  is_tar=False
[2025-07-27 17:00:33]  lfn=log.45743349._049912.job.log.tgz.1
[2025-07-27 17:00:33]  mtime=0
[2025-07-27 17:00:33]  protocol_id=None
[2025-07-27 17:00:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 17:00:33]  replicas=None
[2025-07-27 17:00:33]  scope=mc23_13p6TeV
[2025-07-27 17:00:33]  status=None
[2025-07-27 17:00:33]  status_code=0
[2025-07-27 17:00:33]  storage_token=
[2025-07-27 17:00:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747413029/log.45743349._049912.job.log.tgz.1
[2025-07-27 17:00:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/f1/log.45743349._049912.job.log.tgz.1
[2025-07-27 17:00:33]  workdir=None
[2025-07-27 17:00:33] ]
[2025-07-27 17:00:33] 2025-07-27 20:59:52,310 | INFO     | transferring file log.45743349._049912.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747413029/log.45743349._049912.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:00:33] 2025-07-27 20:59:52,310 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747413029/log.45743349._049912.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._049912.job
[2025-07-27 17:00:33] 2025-07-27 20:59:52,334 | INFO     | adding to output.list: log.45743349._049912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/f1/log.45743349._049912.job.log.tg
[2025-07-27 17:00:33] 2025-07-27 20:59:52,334 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:00:33] 2025-07-27 20:59:52,334 | INFO     | summary of transferred files:
[2025-07-27 17:00:33] 2025-07-27 20:59:52,334 | INFO     |  -- lfn=log.45743349._049912.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:00:33] 2025-07-27 20:59:52,335 | INFO     | stage-out finished correctly
[2025-07-27 17:00:33] 2025-07-27 20:59:54,391 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:00:33] 2025-07-27 20:59:54,758 | INFO     | PID=4132697 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:00:33] 2025-07-27 20:59:54,758 | INFO     | .. there are 24 such processes running
[2025-07-27 17:00:33] 2025-07-27 20:59:55,965 | INFO     | job 6747413029 has state=finished
[2025-07-27 17:00:33] 2025-07-27 20:59:55,965 | INFO     | preparing for final server update for job 6747413029 in state='finished'
[2025-07-27 17:00:33] 2025-07-27 20:59:55,966 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:00:33] 2025-07-27 20:59:55,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:00:33] 2025-07-27 20:59:55,966 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:00:33] 2025-07-27 20:59:55,966 | INFO     | job 6747413029 has finished - writing final server update
[2025-07-27 17:00:33] 2025-07-27 20:59:55,966 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:00:33] 2025-07-27 20:59:55,967 | INFO     | executing command: lscpu
[2025-07-27 17:00:33] 2025-07-27 20:59:56,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:00:33] 2025-07-27 20:59:58,479 | WARNING  | process 4139157 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:00:33] 2025-07-27 20:59:58,479 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413029/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:00:33] 2025-07-27 20:59:58,767 | INFO     | number of running child processes to parent process 4139157: 1
[2025-07-27 17:00:33] 2025-07-27 20:59:58,767 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:00:33] 2025-07-27 21:00:00,739 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:00:33] 2025-07-27 21:00:00,743 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3252.2378906250005
[2025-07-27 17:00:33] 2025-07-27 21:00:00,752 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413029/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,753 | INFO     | extracted standard info from prmon json
[2025-07-27 17:00:33] 2025-07-27 21:00:00,753 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:00:33] 2025-07-27 21:00:00,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:00:33] 2025-07-27 21:00:00,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:00:33] 2025-07-27 21:00:00,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | sum of deviations: -16813104076.999998
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | mean x: 1753647504.5
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | mean y: 2377883.8974358975
[2025-07-27 17:00:33] 2025-07-27 21:00:00,755 | INFO     | -- intersect: 200403135842.1535
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | intersect: 200403135842.1535
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | chi2: 0.21118234719639908
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | -- intersect: 200403135842.1535
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | current memory leak: -114.28 B/s (using 78 data points, chi2=0.21)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | could have reported an average CPU frequency of 3255 MHz (6 samples)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | ..............................
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | . Timing measurements:
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | . get job = 0 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | . initial setup = 2 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | . payload setup = 8 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,756 | INFO     | . stage-in = 0 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,757 | INFO     | . payload execution = 5142 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,757 | INFO     | . stage-out = 0 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,757 | INFO     | . log creation = 0 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,757 | INFO     | ..............................
[2025-07-27 17:00:33] 2025-07-27 21:00:00,826 | INFO     | 
[2025-07-27 17:00:33] 2025-07-27 21:00:00,826 | INFO     | job summary report
[2025-07-27 17:00:33] 2025-07-27 21:00:00,826 | INFO     | --------------------------------------------------
[2025-07-27 17:00:33] 2025-07-27 21:00:00,826 | INFO     | PanDA job id: 6747413029
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | task id: 45743349
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | errors: (none)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | pilot state: finished 
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | transexitcode: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | exeerrorcode: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | exeerrordiag: 
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | exitcode: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | exitmsg: OK
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | cpuconsumptiontime: 37076 s
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | nevents: 400
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | neventsw: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | pid: 4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | pgrp: 4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | corecount: 8
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | event service: False
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | sizes: {0: 2397361, 1: 2397503, 6: 2397765, 11: 2397793, 5154: 2424121, 5155: 2433119, 5157: 2433303, 5164: 2433497}
[2025-07-27 17:00:33] 2025-07-27 21:00:00,827 | INFO     | --------------------------------------------------
[2025-07-27 17:00:33] 2025-07-27 21:00:00,828 | INFO     | 
[2025-07-27 17:00:33] 2025-07-27 21:00:00,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 17:00:33] 2025-07-27 21:00:00,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | job 6747413029 has completed (purged errors)
[2025-07-27 17:00:33] 2025-07-27 21:00:00,850 | INFO     | overall cleanup function is called
[2025-07-27 17:00:33] 2025-07-27 21:00:01,859 | INFO     | --- collectZombieJob: --- 10, [4139157]
[2025-07-27 17:00:33] 2025-07-27 21:00:01,859 | INFO     | zombie collector waiting for pid 4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:01,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:00:33] 2025-07-27 21:00:01,859 | INFO     | collected zombie processes
[2025-07-27 17:00:33] 2025-07-27 21:00:01,859 | INFO     | will attempt to kill all subprocesses of pid=4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:02,183 | INFO     | process IDs to be killed: [4139157] (in reverse order)
[2025-07-27 17:00:33] 2025-07-27 21:00:02,317 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:00:33] 2025-07-27 21:00:02,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:00:33] 2025-07-27 21:00:02,332 | INFO     | did not find any defunct processes belonging to 4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:02,343 | INFO     | did not find any defunct processes belonging to 4139157
[2025-07-27 17:00:33] 2025-07-27 21:00:02,343 | INFO     | ready for new job
[2025-07-27 17:00:33] 2025-07-27 21:00:02,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:00:33] 2025-07-27 21:00:02,345 | INFO     | ***************************************
[2025-07-27 17:00:33] 2025-07-27 21:00:02,348 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:00:33] 2025-07-27 21:00:02,348 | INFO     | ***************************************
[2025-07-27 17:00:33] 2025-07-27 21:00:02,348 | INFO     | 
[2025-07-27 17:00:33] 2025-07-27 21:00:02,351 | INFO     | architecture information:
[2025-07-27 17:00:33] 2025-07-27 21:00:02,352 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:00:33] 2025-07-27 21:00:02,370 | INFO     | cat /etc/os-release:
[2025-07-27 17:00:33] NAME="CentOS Linux"
[2025-07-27 17:00:33] VERSION="7 (Core)"
[2025-07-27 17:00:33] ID="centos"
[2025-07-27 17:00:33] ID_LIKE="rhel fedora"
[2025-07-27 17:00:33] VERSION_ID="7"
[2025-07-27 17:00:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:00:33] ANSI_COLOR="0;31"
[2025-07-27 17:00:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:00:33] HOME_URL="https://www.centos.org/"
[2025-07-27 17:00:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:00:33] 
[2025-07-27 17:00:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:00:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:00:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:00:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:00:33] 
[2025-07-27 17:00:33] 2025-07-27 21:00:02,371 | INFO     | ***************************************
[2025-07-27 17:00:33] 2025-07-27 21:00:02,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 17:00:33] 2025-07-27 21:00:02,892 | INFO     | sufficient remaining disk space (86211821568 B)
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | INFO     | update_server=False
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:00:33] 2025-07-27 21:00:02,893 | INFO     | aborting loop
[2025-07-27 17:00:33] 2025-07-27 21:00:02,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:00:33] 2025-07-27 21:00:03,883 | INFO     | all data control threads have been joined
[2025-07-27 17:00:33] 2025-07-27 21:00:03,888 | INFO     | all payload control threads have been joined
[2025-07-27 17:00:33] 2025-07-27 21:00:03,898 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:03,898 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,021 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,275 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,401 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,403 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,479 | INFO     | all job control threads have been joined
[2025-07-27 17:00:33] 2025-07-27 21:00:04,825 | INFO     | [job] validate thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,888 | INFO     | [data] control thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,893 | INFO     | [payload] control thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,932 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:04,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:00:33] 2025-07-27 21:00:05,129 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:05,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:05,255 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:05,484 | INFO     | [job] control thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:05,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:00:33] 2025-07-27 21:00:06,842 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:08,977 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:00:33] 2025-07-27 21:00:10,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273599444800)>', '<ExcThread(monitor, started 140272868509440)>']
[2025-07-27 17:00:33] 2025-07-27 21:00:15,804 | INFO     | all workflow threads have been joined
[2025-07-27 17:00:33] 2025-07-27 21:00:15,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:00:33] 2025-07-27 21:00:15,805 | INFO     | traces error code: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:15,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:00:33] 2025-07-27 21:00:33,168 | INFO     | PID=4132697 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:00:33] 2025-07-27 21:00:33,169 | INFO     | .. there are 24 such processes running
[2025-07-27 17:00:33] 2025-07-27 21:00:33,170 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:00:33] 2025-07-27 21:00:33,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:00:33] 2025-07-27 21:00:33,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:00:33] 2025-07-27 21:00:33,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:00:33] 2025-07-27 21:00:33,170 | INFO     | [monitor] control thread has ended
[2025-07-27 17:00:33] 2025-07-27 21:00:33,268 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:00:33] 2025-07-27 21:00:33,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:00:33] 2025-07-27 21:00:33,273 [wrapper] pilotpid: 4132697
[2025-07-27 17:00:33] 2025-07-27 21:00:33,277 [wrapper] Pilot exit status: 0
[2025-07-27 17:00:33] 2025-07-27 21:00:33,298 [wrapper] pandaids: 6747413029
[2025-07-27 17:00:33] 2025-07-27 21:00:33,380 [wrapper] cleanup supervisor_pilot  287868 4132698
[2025-07-27 17:00:33] 2025-07-27 21:00:33,383 [wrapper] Test setup, not cleaning
[2025-07-27 17:00:33] 2025-07-27 21:00:33,385 [wrapper] apfmon messages muted
[2025-07-27 17:00:33] 2025-07-27 21:00:33,388 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:00:33] 2025-07-27 21:00:33,392 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:00:33]  *** Error codes and diagnostics ***
[2025-07-27 17:00:33]     "exeErrorCode": 0,
[2025-07-27 17:00:33]     "exeErrorDiag": "",
[2025-07-27 17:00:33]     "pilotErrorCode": 0,
[2025-07-27 17:00:33]     "pilotErrorDiag": "",
[2025-07-27 17:00:33]  *** Listing of results directory ***
[2025-07-27 17:00:33] total 354700
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 17:00:33] -rwx------. 1 boincer umatlas     36292 Jul 27 10:23 runpilot2-wrapper.sh
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:23 queuedata.json
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:00:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:33 run_atlas
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:33 job.xml
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas 145641863 Jul 27 15:33 EVNT.45743347._002774.pool.root.1
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:33 start_atlas.sh
[2025-07-27 17:00:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:33 shared
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 15:33 input.tar.gz
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:33 boinc_lockfile
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:33 pandaJob.out
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas    980125 Jul 27 15:33 agis_schedconf.cvmfs.json
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:00:33] drwx------. 4 boincer umatlas      4096 Jul 27 15:33 pilot3
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas      6897 Jul 27 16:54 init_data.xml
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas 212054607 Jul 27 16:59 HITS.45743349._049912.pool.root.1
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:59 boinc_task_state.xml
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas      1029 Jul 27 16:59 memory_monitor_summary.json
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas    308384 Jul 27 16:59 log.45743349._049912.job.log.tgz.1
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas      7774 Jul 27 17:00 heartbeat.json
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas        95 Jul 27 17:00 pilot_heartbeat.json
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas       823 Jul 27 17:00 pilotlog.txt
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:00 boinc_mmap_file
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas        27 Jul 27 17:00 wrapper_checkpoint.txt
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas    508378 Jul 27 17:00 log.45743349._049912.job.log.1
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas       357 Jul 27 17:00 output.list
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:00 runtime_log
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas    839680 Jul 27 17:00 result.tar.gz
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 17:00 runtime_log.err
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas       652 Jul 27 17:00 169KDmoSH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCXVLDmOxYxbn.diag
[2025-07-27 17:00:33] -rw-r--r--. 1 boincer umatlas     21686 Jul 27 17:00 stderr.txt
[2025-07-27 17:00:33] HITS file was successfully produced:
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas 212054607 Jul 27 16:59 shared/HITS.pool.root.1
[2025-07-27 17:00:33]  *** Contents of shared directory: ***
[2025-07-27 17:00:33] total 350692
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas 145641863 Jul 27 15:33 ATLAS.root_0
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:33 start_atlas.sh
[2025-07-27 17:00:33] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 15:33 input.tar.gz
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas 212054607 Jul 27 16:59 HITS.pool.root.1
[2025-07-27 17:00:33] -rw-------. 1 boincer umatlas    839680 Jul 27 17:00 result.tar.gz
17:00:35 (4128682): run_atlas exited; CPU time 37127.272622
17:00:35 (4128682): called boinc_finish(0)

</stderr_txt>
]]>

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