Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:38 (2400696): wrapper (7.7.26015): starting
15:31:38 (2400696): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:31:38] Arguments: --nthreads 8
[2025-07-27 15:31:38] Threads: 8
[2025-07-27 15:31:38] Checking for CVMFS
[2025-07-27 15:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:31:38] 2.13.1.0 116762 8817 202788 148822 2 82 34935994 40960001 12202 16776704 0 122855730 99.999 339675 39074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 15:31:38] CVMFS is ok
[2025-07-27 15:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:31:38] Further information can be found at the LHC@home message board.
[2025-07-27 15:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:31:38] Checking for apptainer binary...
[2025-07-27 15:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:31:38] Running /usr/bin/apptainer --version
[2025-07-27 15:31:38] apptainer version 1.4.1-1.el9
[2025-07-27 15:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:31:38] c-208-39.aglt2.org
[2025-07-27 15:31:38] apptainer works
[2025-07-27 15:31:38] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:31:38] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:31:39] Starting ATLAS job with PandaID=6747412748
[2025-07-27 15:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:29:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:29:02]  replicas=None
[2025-07-27 16:29:02]  scope=mc23_13p6TeV
[2025-07-27 16:29:02]  status=None
[2025-07-27 16:29:02]  status_code=0
[2025-07-27 16:29:02]  storage_token=
[2025-07-27 16:29:02]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6747412748/log.45743349._049668.job.log.tgz.1
[2025-07-27 16:29:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/4d/log.45743349._049668.job.log.tgz.1
[2025-07-27 16:29:02]  workdir=None
[2025-07-27 16:29:02] ]
[2025-07-27 16:29:02] 2025-07-27 20:28:19,753 | INFO     | transferring file log.45743349._049668.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6747412748/log.45743349._049668.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:29:02] 2025-07-27 20:28:19,754 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6747412748/log.45743349._049668.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._049668.job
[2025-07-27 16:29:02] 2025-07-27 20:28:19,772 | INFO     | adding to output.list: log.45743349._049668.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/4d/log.45743349._049668.job.log.tg
[2025-07-27 16:29:02] 2025-07-27 20:28:19,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:29:02] 2025-07-27 20:28:19,772 | INFO     | summary of transferred files:
[2025-07-27 16:29:02] 2025-07-27 20:28:19,773 | INFO     |  -- lfn=log.45743349._049668.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:29:02] 2025-07-27 20:28:19,773 | INFO     | stage-out finished correctly
[2025-07-27 16:29:02] 2025-07-27 20:28:20,248 | INFO     | monitor loop #248: job 0:6747412748 is in state 'finished'
[2025-07-27 16:29:02] 2025-07-27 20:28:20,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:29:02] 2025-07-27 20:28:22,248 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:29:02] 2025-07-27 20:28:22,756 | INFO     | monitor loop #249: job 0:6747412748 is in state 'finished'
[2025-07-27 16:29:02] 2025-07-27 20:28:22,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:29:02] 2025-07-27 20:28:24,196 | INFO     | job 6747412748 has state=finished
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | preparing for final server update for job 6747412748 in state='finished'
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | job 6747412748 has finished - writing final server update
[2025-07-27 16:29:02] 2025-07-27 20:28:24,197 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:29:02] 2025-07-27 20:28:24,198 | INFO     | executing command: lscpu
[2025-07-27 16:29:02] 2025-07-27 20:28:24,255 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:29:02] 2025-07-27 20:28:25,259 | INFO     | monitor loop #250: job 0:6747412748 is in state 'finished'
[2025-07-27 16:29:02] 2025-07-27 20:28:25,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:29:02] 2025-07-27 20:28:25,460 | INFO     | PID=2408352 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:29:02] 2025-07-27 20:28:25,460 | INFO     | .. there are 16 such processes running
[2025-07-27 16:29:02] 2025-07-27 20:28:27,762 | INFO     | monitor loop #251: job 0:6747412748 is in state 'finished'
[2025-07-27 16:29:02] 2025-07-27 20:28:27,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,078 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:29:02] 2025-07-27 20:28:28,083 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3757.0040703124996
[2025-07-27 16:29:02] 2025-07-27 20:28:28,096 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6747412748/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,097 | INFO     | extracted standard info from prmon json
[2025-07-27 16:29:02] 2025-07-27 20:28:28,098 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:29:02] 2025-07-27 20:28:28,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:29:02] 2025-07-27 20:28:28,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:29:02] 2025-07-27 20:28:28,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | sum of square deviations: 36465800.0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | sum of deviations: -634738671.9999999
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | mean x: 1753646500.0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | mean y: 2540817.0408163266
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | -- intersect: 30527231090.322845
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | intersect: 30527231090.322845
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | chi2: 0.0005050427435941594
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | -- intersect: 30527231090.322845
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | current memory leak: -17.41 B/s (using 49 data points, chi2=0.00)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,100 | INFO     | could have reported an average CPU frequency of 3748 MHz (5 samples)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | ..............................
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . Timing measurements:
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . get job = 0 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . initial setup = 2 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . payload setup = 5 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . stage-in = 0 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . payload execution = 3368 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . stage-out = 0 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | . log creation = 0 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,101 | INFO     | ..............................
[2025-07-27 16:29:02] 2025-07-27 20:28:28,491 | INFO     | 
[2025-07-27 16:29:02] 2025-07-27 20:28:28,491 | INFO     | job summary report
[2025-07-27 16:29:02] 2025-07-27 20:28:28,491 | INFO     | --------------------------------------------------
[2025-07-27 16:29:02] 2025-07-27 20:28:28,491 | INFO     | PanDA job id: 6747412748
[2025-07-27 16:29:02] 2025-07-27 20:28:28,491 | INFO     | task id: 45743349
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | errors: (none)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | pilot state: finished 
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | transexitcode: 0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | exeerrorcode: 0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | exeerrordiag: 
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | exitcode: 0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | exitmsg: OK
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | cpuconsumptiontime: 24990 s
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | nevents: 400
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | neventsw: 0
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | pid: 2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | pgrp: 2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | corecount: 8
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | event service: False
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3377: 2423473, 3378: 2432471, 3380: 2432527, 3386: 2432881}
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | --------------------------------------------------
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | 
[2025-07-27 16:29:02] 2025-07-27 20:28:28,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-27 16:29:02] 2025-07-27 20:28:28,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | job 6747412748 has completed (purged errors)
[2025-07-27 16:29:02] 2025-07-27 20:28:28,510 | INFO     | overall cleanup function is called
[2025-07-27 16:29:02] 2025-07-27 20:28:29,517 | INFO     | --- collectZombieJob: --- 10, [2421151]
[2025-07-27 16:29:02] 2025-07-27 20:28:29,517 | INFO     | zombie collector waiting for pid 2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:29,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:29:02] 2025-07-27 20:28:29,517 | INFO     | collected zombie processes
[2025-07-27 16:29:02] 2025-07-27 20:28:29,517 | INFO     | will attempt to kill all subprocesses of pid=2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:29,882 | INFO     | process IDs to be killed: [2421151] (in reverse order)
[2025-07-27 16:29:02] 2025-07-27 20:28:30,003 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:29:02] 2025-07-27 20:28:30,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:29:02] 2025-07-27 20:28:30,020 | INFO     | did not find any defunct processes belonging to 2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:30,035 | INFO     | did not find any defunct processes belonging to 2421151
[2025-07-27 16:29:02] 2025-07-27 20:28:30,035 | INFO     | ready for new job
[2025-07-27 16:29:02] 2025-07-27 20:28:30,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:29:02] 2025-07-27 20:28:30,036 | INFO     | ***************************************
[2025-07-27 16:29:02] 2025-07-27 20:28:30,036 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:29:02] 2025-07-27 20:28:30,036 | INFO     | ***************************************
[2025-07-27 16:29:02] 2025-07-27 20:28:30,037 | INFO     | 
[2025-07-27 16:29:02] 2025-07-27 20:28:30,041 | INFO     | architecture information:
[2025-07-27 16:29:02] 2025-07-27 20:28:30,041 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:29:02] 2025-07-27 20:28:30,055 | INFO     | cat /etc/os-release:
[2025-07-27 16:29:02] NAME="CentOS Linux"
[2025-07-27 16:29:02] VERSION="7 (Core)"
[2025-07-27 16:29:02] ID="centos"
[2025-07-27 16:29:02] ID_LIKE="rhel fedora"
[2025-07-27 16:29:02] VERSION_ID="7"
[2025-07-27 16:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:29:02] ANSI_COLOR="0;31"
[2025-07-27 16:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:29:02] HOME_URL="https://www.centos.org/"
[2025-07-27 16:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:29:02] 
[2025-07-27 16:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:29:02] 
[2025-07-27 16:29:02] 2025-07-27 20:28:30,055 | INFO     | ***************************************
[2025-07-27 16:29:02] 2025-07-27 20:28:30,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-27 16:29:02] 2025-07-27 20:28:30,574 | INFO     | sufficient remaining disk space (165535547392 B)
[2025-07-27 16:29:02] 2025-07-27 20:28:30,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:29:02] 2025-07-27 20:28:30,575 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:29:02] 2025-07-27 20:28:30,575 | INFO     | update_server=False
[2025-07-27 16:29:02] 2025-07-27 20:28:30,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:29:02] 2025-07-27 20:28:30,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:29:02] 2025-07-27 20:28:31,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:29:02] 2025-07-27 20:28:31,270 | INFO     | aborting loop
[2025-07-27 16:29:02] 2025-07-27 20:28:31,337 | INFO     | all data control threads have been joined
[2025-07-27 16:29:02] 2025-07-27 20:28:31,579 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:31,632 | INFO     | all job control threads have been joined
[2025-07-27 16:29:02] 2025-07-27 20:28:31,732 | INFO     | all payload control threads have been joined
[2025-07-27 16:29:02] 2025-07-27 20:28:31,881 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,197 | INFO     | [job] validate thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,199 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,276 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,342 | INFO     | [data] control thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,363 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,405 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,581 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,583 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,637 | INFO     | [job] control thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,737 | INFO     | [payload] control thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:32,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:29:02] 2025-07-27 20:28:33,022 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:33,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:29:02] 2025-07-27 20:28:34,173 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:36,819 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:41,120 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:29:02] 2025-07-27 20:28:42,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:29:02] 2025-07-27 20:28:43,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771911870272)>', '<ExcThread(monitor, started 139771405899520)>']
[2025-07-27 16:29:02] 2025-07-27 20:28:48,792 | INFO     | all workflow threads have been joined
[2025-07-27 16:29:02] 2025-07-27 20:28:48,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:29:02] 2025-07-27 20:28:48,792 | INFO     | traces error code: 0
[2025-07-27 16:29:02] 2025-07-27 20:28:48,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:29:02] 2025-07-27 20:29:01,995 | INFO     | PID=2408352 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:29:02] 2025-07-27 20:29:01,995 | INFO     | .. there are 16 such processes running
[2025-07-27 16:29:02] 2025-07-27 20:29:01,996 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:29:02] 2025-07-27 20:29:01,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:29:02] 2025-07-27 20:29:01,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:29:02] 2025-07-27 20:29:01,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:29:02] 2025-07-27 20:29:01,996 | INFO     | [monitor] control thread has ended
[2025-07-27 16:29:02] 2025-07-27 20:29:02,084 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:29:02] 2025-07-27 20:29:02,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:29:02] 2025-07-27 20:29:02,089 [wrapper] pilotpid: 2408352
[2025-07-27 16:29:02] 2025-07-27 20:29:02,092 [wrapper] Pilot exit status: 0
[2025-07-27 16:29:02] 2025-07-27 20:29:02,101 [wrapper] pandaids: 6747412748
[2025-07-27 16:29:02] 2025-07-27 20:29:02,187 [wrapper] cleanup supervisor_pilot 2728917 2408353
[2025-07-27 16:29:02] 2025-07-27 20:29:02,190 [wrapper] Test setup, not cleaning
[2025-07-27 16:29:02] 2025-07-27 20:29:02,193 [wrapper] apfmon messages muted
[2025-07-27 16:29:02] 2025-07-27 20:29:02,195 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:29:02] 2025-07-27 20:29:02,197 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:29:02]  *** Error codes and diagnostics ***
[2025-07-27 16:29:02]     "exeErrorCode": 0,
[2025-07-27 16:29:02]     "exeErrorDiag": "",
[2025-07-27 16:29:02]     "pilotErrorCode": 0,
[2025-07-27 16:29:02]     "pilotErrorDiag": "",
[2025-07-27 16:29:02]  *** Listing of results directory ***
[2025-07-27 16:29:02] total 435912
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 16:29:02] -rwx------. 1 boincer umatlas     36292 Jul 27 10:09 runpilot2-wrapper.sh
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:09 queuedata.json
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:29:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:31 run_atlas
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:31 job.xml
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas 229013418 Jul 27 15:31 EVNT.45743347._002737.pool.root.1
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:31 start_atlas.sh
[2025-07-27 16:29:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:31 shared
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 15:31 input.tar.gz
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:31 boinc_lockfile
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:31 pandaJob.out
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas    980125 Jul 27 15:31 agis_schedconf.cvmfs.json
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:29:02] drwx------. 4 boincer umatlas      4096 Jul 27 15:31 pilot3
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas      7174 Jul 27 16:20 init_data.xml
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas 212184412 Jul 27 16:27 HITS.45743349._049668.pool.root.1
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:27 boinc_task_state.xml
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas      1028 Jul 27 16:28 memory_monitor_summary.json
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas    302654 Jul 27 16:28 log.45743349._049668.job.log.tgz.1
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas      7768 Jul 27 16:28 heartbeat.json
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:28 wrapper_checkpoint.txt
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:28 boinc_mmap_file
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas        95 Jul 27 16:29 pilot_heartbeat.json
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas       823 Jul 27 16:29 pilotlog.txt
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas    348329 Jul 27 16:29 log.45743349._049668.job.log.1
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas       357 Jul 27 16:29 output.list
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:29 runtime_log
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas    665600 Jul 27 16:29 result.tar.gz
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 16:29 runtime_log.err
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas       651 Jul 27 16:29 fBwNDmbFH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmle2KDmCgyJGm.diag
[2025-07-27 16:29:02] -rw-r--r--. 1 boincer umatlas     21955 Jul 27 16:29 stderr.txt
[2025-07-27 16:29:02] HITS file was successfully produced:
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas 212184412 Jul 27 16:27 shared/HITS.pool.root.1
[2025-07-27 16:29:02]  *** Contents of shared directory: ***
[2025-07-27 16:29:02] total 432068
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas 229013418 Jul 27 15:31 ATLAS.root_0
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:31 start_atlas.sh
[2025-07-27 16:29:02] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 15:31 input.tar.gz
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas 212184412 Jul 27 16:27 HITS.pool.root.1
[2025-07-27 16:29:02] -rw-------. 1 boincer umatlas    665600 Jul 27 16:29 result.tar.gz
16:29:03 (2400696): run_atlas exited; CPU time 25068.226996
16:29:03 (2400696): called boinc_finish(0)

</stderr_txt>
]]>

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