Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:28:01 (1692623): wrapper (7.7.26015): starting
12:28:01 (1692623): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:28:01] Arguments: --nthreads 12
[2025-07-27 12:28:01] Threads: 12
[2025-07-27 12:28:01] Checking for CVMFS
[2025-07-27 12:28:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:28:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:28:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:28:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:28:01] 2.11.5.0 6742 37560 247284 148822 0 579 28428872 45568000 9956 130560 0 311850523 99.763 208015853 24042 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-27 12:28:01] CVMFS is ok
[2025-07-27 12:28:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:28:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:28:01] Further information can be found at the LHC@home message board.
[2025-07-27 12:28:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:28:01] Checking for apptainer binary...
[2025-07-27 12:28:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:28:01] Running /usr/bin/apptainer --version
[2025-07-27 12:28:01] apptainer version 1.4.1-1.el9
[2025-07-27 12:28:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:28:02] wns0095.triumf.lcg
[2025-07-27 12:28:02] apptainer works
[2025-07-27 12:28:02] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:28:02] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:28:02] Starting ATLAS job with PandaID=6747548791
[2025-07-27 12:28:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:31:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | found no stored workdir sizes
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | WARNING  | wrong length of table data, x=[1753644512.0], y=[953.0] (must be same and length>=4)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | could have reported an average CPU frequency of 2530 MHz (4 samples)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | . Timing measurements:
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . get job = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . initial setup = 2 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload setup = 4 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-in = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload execution = 15 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-out = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . log creation = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747548791/pilotlog.txt
[2025-07-27 12:31:20] 2025-07-27 19:30:47,574 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 12:31:20] - Log from pilotlog.txt -
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | found no stored workdir sizes
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | WARNING  | wrong length of table data, x=[1753644512.0], y=[953.0] (must be same and length>=4)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | could have reported an average CPU frequency of 2530 MHz (4 samples)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | . Timing measurements:
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . get job = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . initial setup = 2 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload setup = 4 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-in = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload execution = 15 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-out = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . log creation = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747548791/pilotlog.txt
[2025-07-27 12:31:20] 2025-07-27 19:30:47,574 | WARNING  | 
[2025-07-27 12:31:20] [begin log extracts]
[2025-07-27 12:31:20] - Log from pilotlog.txt -
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | WARNING  | found no stored workdir sizes
[2025-07-27 12:31:20] 2025-07-27 19:30:47,560 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | WARNING  | wrong length of table data, x=[1753644512.0], y=[953.0] (must be same and length>=4)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | could have reported an average CPU frequency of 2530 MHz (4 samples)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,561 | INFO     | . Timing measurements:
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . get job = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . initial setup = 2 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload setup = 4 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-in = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . payload execution = 15 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . stage-out = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | . log creation = 0 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | ..............................
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 12:31:20] 2025-07-27 19:30:47,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747548791/pilotlog.txt
[2025-07-27 12:31:20] [end log extracts]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,575 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,576 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 12:31:20] 2025-07-27 19:30:47,958 | INFO     | 
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | job summary report
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | --------------------------------------------------
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | PanDA job id: 6747548791
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | task id: 45743349
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 12:28:39,349 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | pilot state: failed 
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | transexitcode: 65
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | exeerrorcode: 65
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | exitcode: 65
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | cpuconsumptiontime: 17 s
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | nevents: 0
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | neventsw: 0
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | pid: 1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | pgrp: 1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | corecount: 12
[2025-07-27 12:31:20] 2025-07-27 19:30:47,959 | INFO     | event service: False
[2025-07-27 12:31:20] 2025-07-27 19:30:47,960 | INFO     | sizes: {0: 2397472, 3: 2397734, 11: 2397762, 23: 2425229, 24: 2425229, 144: 2425395}
[2025-07-27 12:31:20] 2025-07-27 19:30:47,960 | INFO     | --------------------------------------------------
[2025-07-27 12:31:20] 2025-07-27 19:30:47,960 | INFO     | 
[2025-07-27 12:31:20] 2025-07-27 19:30:47,960 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 12:31:20] 2025-07-27 19:30:47,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:31:20] 2025-07-27 19:30:47,976 | INFO     | job 6747548791 has completed (purged errors)
[2025-07-27 12:31:20] 2025-07-27 19:30:47,977 | INFO     | overall cleanup function is called
[2025-07-27 12:31:20] 2025-07-27 19:30:48,983 | INFO     | --- collectZombieJob: --- 10, [1702552]
[2025-07-27 12:31:20] 2025-07-27 19:30:48,983 | INFO     | zombie collector waiting for pid 1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:48,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:31:20] 2025-07-27 19:30:48,983 | INFO     | collected zombie processes
[2025-07-27 12:31:20] 2025-07-27 19:30:48,983 | INFO     | will attempt to kill all subprocesses of pid=1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:49,105 | INFO     | process IDs to be killed: [1702552] (in reverse order)
[2025-07-27 12:31:20] 2025-07-27 19:30:49,154 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:31:20] 2025-07-27 19:30:49,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:31:20] 2025-07-27 19:30:49,160 | INFO     | did not find any defunct processes belonging to 1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:49,165 | INFO     | did not find any defunct processes belonging to 1702552
[2025-07-27 12:31:20] 2025-07-27 19:30:49,165 | INFO     | ready for new job
[2025-07-27 12:31:20] 2025-07-27 19:30:49,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:31:20] 2025-07-27 19:30:49,167 | INFO     | ***************************************
[2025-07-27 12:31:20] 2025-07-27 19:30:49,167 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:31:20] 2025-07-27 19:30:49,167 | INFO     | ***************************************
[2025-07-27 12:31:20] 2025-07-27 19:30:49,167 | INFO     | 
[2025-07-27 12:31:20] 2025-07-27 19:30:49,169 | INFO     | architecture information:
[2025-07-27 12:31:20] 2025-07-27 19:30:49,170 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:31:20] 2025-07-27 19:30:49,180 | INFO     | cat /etc/os-release:
[2025-07-27 12:31:20] NAME="CentOS Linux"
[2025-07-27 12:31:20] VERSION="7 (Core)"
[2025-07-27 12:31:20] ID="centos"
[2025-07-27 12:31:20] ID_LIKE="rhel fedora"
[2025-07-27 12:31:20] VERSION_ID="7"
[2025-07-27 12:31:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:31:20] ANSI_COLOR="0;31"
[2025-07-27 12:31:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:31:20] HOME_URL="https://www.centos.org/"
[2025-07-27 12:31:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:31:20] 
[2025-07-27 12:31:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:31:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:31:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:31:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:31:20] 
[2025-07-27 12:31:20] 2025-07-27 19:30:49,181 | INFO     | ***************************************
[2025-07-27 12:31:20] 2025-07-27 19:30:49,684 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 12:31:20] 2025-07-27 19:30:49,696 | INFO     | sufficient remaining disk space (2003805667328 B)
[2025-07-27 12:31:20] 2025-07-27 19:30:49,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:31:20] 2025-07-27 19:30:49,696 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:31:20] 2025-07-27 19:30:49,696 | INFO     | update_server=False
[2025-07-27 12:31:20] 2025-07-27 19:30:49,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:31:20] 2025-07-27 19:30:50,037 | INFO     | all job control threads have been joined
[2025-07-27 12:31:20] 2025-07-27 19:30:50,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:31:20] 2025-07-27 19:30:50,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:31:20] 2025-07-27 19:30:50,401 | INFO     | aborting loop
[2025-07-27 12:31:20] 2025-07-27 19:30:50,674 | INFO     | all payload control threads have been joined
[2025-07-27 12:31:20] 2025-07-27 19:30:50,701 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:50,760 | INFO     | all data control threads have been joined
[2025-07-27 12:31:20] 2025-07-27 19:30:50,788 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:50,810 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:50,843 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,042 | INFO     | [job] control thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,108 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:31:20] 2025-07-27 19:30:51,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,404 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,406 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,679 | INFO     | [payload] control thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:51,763 | INFO     | [data] control thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:52,003 | INFO     | [job] validate thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:52,166 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:52,380 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:52,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:31:20] 2025-07-27 19:30:53,653 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:55,225 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:31:20] 2025-07-27 19:30:56,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920927418176)>', '<ExcThread(monitor, started 139920521795328)>']
[2025-07-27 12:31:20] 2025-07-27 19:31:01,614 | INFO     | all workflow threads have been joined
[2025-07-27 12:31:20] 2025-07-27 19:31:01,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:31:20] 2025-07-27 19:31:01,615 | INFO     | traces error code: 0
[2025-07-27 12:31:20] 2025-07-27 19:31:01,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:31:20] 2025-07-27 19:31:20,197 | INFO     | PID=1696224 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:31:20] 2025-07-27 19:31:20,198 | INFO     | .. there are 10 such processes running
[2025-07-27 12:31:20] 2025-07-27 19:31:20,198 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:31:20] 2025-07-27 19:31:20,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:31:20] 2025-07-27 19:31:20,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:31:20] 2025-07-27 19:31:20,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:31:20] 2025-07-27 19:31:20,199 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 12:31:20] 2025-07-27 19:31:20,199 | INFO     | [monitor] control thread has ended
[2025-07-27 12:31:20] 2025-07-27 19:31:20,339 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:31:20] 2025-07-27 19:31:20,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:31:20] 2025-07-27 19:31:20,343 [wrapper] pilotpid: 1696224
[2025-07-27 12:31:20] 2025-07-27 19:31:20,345 [wrapper] Pilot exit status: 0
[2025-07-27 12:31:20] 2025-07-27 19:31:20,352 [wrapper] pandaids: 6747548791
[2025-07-27 12:31:20] 2025-07-27 19:31:20,385 [wrapper] cleanup supervisor_pilot 1696230 1696225
[2025-07-27 12:31:20] 2025-07-27 19:31:20,387 [wrapper] Test setup, not cleaning
[2025-07-27 12:31:20] 2025-07-27 19:31:20,390 [wrapper] apfmon messages muted
[2025-07-27 12:31:20] 2025-07-27 19:31:20,392 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:31:20] 2025-07-27 19:31:20,394 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:31:20]  *** Error codes and diagnostics ***
[2025-07-27 12:31:20]     "exeErrorCode": 65,
[2025-07-27 12:31:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 12:31:20]     "pilotErrorCode": 1305,
[2025-07-27 12:31:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 12:31:20]  *** Listing of results directory ***
[2025-07-27 12:31:20] total 228376
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc    530466 Jul 27 09:55 pilot3.tar.gz
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc      5112 Jul 27 09:59 queuedata.json
[2025-07-27 12:31:20] -rwx------. 1 boinc boinc     36292 Jul 27 10:01 runpilot2-wrapper.sh
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc       100 Jul 27 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:31:20] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 12:28 run_atlas
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc       105 Jul 27 12:28 job.xml
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc      6596 Jul 27 12:28 init_data.xml
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc 229792903 Jul 27 12:28 EVNT.45743347._002816.pool.root.1
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc     15095 Jul 27 12:28 start_atlas.sh
[2025-07-27 12:31:20] drwxrwx--x. 2 boinc boinc      4096 Jul 27 12:28 shared
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc    542895 Jul 27 12:28 input.tar.gz
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc         0 Jul 27 12:28 boinc_lockfile
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc      2563 Jul 27 12:28 pandaJob.out
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc    980125 Jul 27 12:28 agis_schedconf.cvmfs.json
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc   1593052 Jul 27 12:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:31:20] drwx------. 4 boinc boinc      4096 Jul 27 12:28 pilot3
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc       964 Jul 27 12:28 memory_monitor_summary.json
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc       522 Jul 27 12:28 boinc_task_state.xml
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc     20981 Jul 27 12:28 log.45743349._052658.job.log.tgz.1
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc      8365 Jul 27 12:30 heartbeat.json
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc        22 Jul 27 12:31 wrapper_checkpoint.txt
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc      8192 Jul 27 12:31 boinc_mmap_file
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc        95 Jul 27 12:31 pilot_heartbeat.json
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc       893 Jul 27 12:31 pilotlog.txt
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc     74346 Jul 27 12:31 log.45743349._052658.job.log.1
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc       188 Jul 27 12:31 output.list
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc       620 Jul 27 12:31 runtime_log
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc    112640 Jul 27 12:31 result.tar.gz
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc      8485 Jul 27 12:31 runtime_log.err
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc       643 Jul 27 12:31 1C3MDmSvJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfvVLDmVH1OCo.diag
[2025-07-27 12:31:20] -rw-r--r--. 1 boinc boinc     21615 Jul 27 12:31 stderr.txt
[2025-07-27 12:31:20] No HITS result produced
[2025-07-27 12:31:20]  *** Contents of shared directory: ***
[2025-07-27 12:31:20] total 225068
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc 229792903 Jul 27 12:28 ATLAS.root_0
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc     15095 Jul 27 12:28 start_atlas.sh
[2025-07-27 12:31:20] -rw-r--r--. 2 boinc boinc    542895 Jul 27 12:28 input.tar.gz
[2025-07-27 12:31:20] -rw-------. 1 boinc boinc    112640 Jul 27 12:31 result.tar.gz
12:31:22 (1692623): run_atlas exited; CPU time 19.042060
12:31:22 (1692623): called boinc_finish(0)

</stderr_txt>
]]>

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