Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:55:35 (610875): wrapper (7.7.26015): starting
15:55:35 (610875): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:55:35] Arguments: --nthreads 8
[2025-07-27 15:55:35] Threads: 8
[2025-07-27 15:55:35] Checking for CVMFS
[2025-07-27 15:55:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:55:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:55:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:55:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:55:35] 2.13.0.0 3724680 19393 242544 148822 3 541 32639330 32935937 19172 16776704 1 90740873 99.573 130832563 19454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 15:55:35] CVMFS is ok
[2025-07-27 15:55:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:55:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:55:35] Further information can be found at the LHC@home message board.
[2025-07-27 15:55:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:55:35] Checking for apptainer binary...
[2025-07-27 15:55:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:55:35] Running /usr/bin/apptainer --version
[2025-07-27 15:55:35] apptainer version 1.4.1-1.el9
[2025-07-27 15:55:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:55:36] c7-4-31.aglt2.org
[2025-07-27 15:55:36] apptainer works
[2025-07-27 15:55:36] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:55:36] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:55:36] Starting ATLAS job with PandaID=6747412697
[2025-07-27 15:55:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:37:27]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:37:27]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747412697/log.45743349._049617.job.log.tgz.1
[2025-07-27 17:37:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/d1/log.45743349._049617.job.log.tgz.1
[2025-07-27 17:37:27]  workdir=None
[2025-07-27 17:37:27] ]
[2025-07-27 17:37:27] 2025-07-27 21:36:38,687 | INFO     | transferring file log.45743349._049617.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747412697/log.45743349._049617.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:37:27] 2025-07-27 21:36:38,687 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747412697/log.45743349._049617.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._049617.job
[2025-07-27 17:37:27] 2025-07-27 21:36:38,711 | INFO     | adding to output.list: log.45743349._049617.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/d1/log.45743349._049617.job.log.tg
[2025-07-27 17:37:27] 2025-07-27 21:36:38,712 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:37:27] 2025-07-27 21:36:38,712 | INFO     | summary of transferred files:
[2025-07-27 17:37:27] 2025-07-27 21:36:38,713 | INFO     |  -- lfn=log.45743349._049617.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:37:27] 2025-07-27 21:36:38,713 | INFO     | stage-out finished correctly
[2025-07-27 17:37:27] 2025-07-27 21:36:39,277 | WARNING  | process 623707 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:37:27] 2025-07-27 21:36:39,277 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747412697/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:37:27] 2025-07-27 21:36:39,757 | INFO     | number of running child processes to parent process 623707: 1
[2025-07-27 17:37:27] 2025-07-27 21:36:39,757 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:37:27] 2025-07-27 21:36:41,816 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:37:27] 2025-07-27 21:36:42,261 | INFO     | monitor loop #414: job 0:6747412697 is in state 'finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:42,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:37:27] 2025-07-27 21:36:44,278 | INFO     | PID=614453 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:37:27] 2025-07-27 21:36:44,279 | INFO     | .. there are 24 such processes running
[2025-07-27 17:37:27] 2025-07-27 21:36:44,764 | INFO     | monitor loop #415: job 0:6747412697 is in state 'finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:44,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:37:27] 2025-07-27 21:36:44,777 | INFO     | job 6747412697 has state=finished
[2025-07-27 17:37:27] 2025-07-27 21:36:44,777 | INFO     | preparing for final server update for job 6747412697 in state='finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:44,778 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:37:27] 2025-07-27 21:36:44,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:37:27] 2025-07-27 21:36:44,778 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:37:27] 2025-07-27 21:36:44,778 | INFO     | job 6747412697 has finished - writing final server update
[2025-07-27 17:37:27] 2025-07-27 21:36:44,779 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:37:27] 2025-07-27 21:36:44,779 | INFO     | executing command: lscpu
[2025-07-27 17:37:27] 2025-07-27 21:36:44,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:37:27] 2025-07-27 21:36:47,268 | INFO     | monitor loop #416: job 0:6747412697 is in state 'finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:47,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:37:27] 2025-07-27 21:36:49,773 | INFO     | monitor loop #417: job 0:6747412697 is in state 'finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:49,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:37:27] 2025-07-27 21:36:52,278 | INFO     | monitor loop #418: job 0:6747412697 is in state 'finished'
[2025-07-27 17:37:27] 2025-07-27 21:36:52,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,494 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:37:27] 2025-07-27 21:36:53,502 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2998.700135416666
[2025-07-27 17:37:27] 2025-07-27 21:36:53,517 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747412697/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,518 | INFO     | extracted standard info from prmon json
[2025-07-27 17:37:27] 2025-07-27 21:36:53,518 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:37:27] 2025-07-27 21:36:53,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:37:27] 2025-07-27 21:36:53,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:37:27] 2025-07-27 21:36:53,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:37:27] 2025-07-27 21:36:53,522 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:37:27] 2025-07-27 21:36:53,522 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | sum of deviations: -1208146815.5
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | mean x: 1753649271.5
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | mean y: 2212870.25
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | -- intersect: 8777712666.133059
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | intersect: 8777712666.133059
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | chi2: 0.07551102025338116
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | -- intersect: 8777712666.133059
[2025-07-27 17:37:27] 2025-07-27 21:36:53,523 | INFO     | current memory leak: -5.00 B/s (using 92 data points, chi2=0.08)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | could have reported an average CPU frequency of 2986 MHz (7 samples)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | ..............................
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . Timing measurements:
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . get job = 0 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . initial setup = 3 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . payload setup = 11 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . stage-in = 0 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . payload execution = 6010 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . stage-out = 0 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | . log creation = 0 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,524 | INFO     | ..............................
[2025-07-27 17:37:27] 2025-07-27 21:36:53,605 | INFO     | 
[2025-07-27 17:37:27] 2025-07-27 21:36:53,605 | INFO     | job summary report
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | --------------------------------------------------
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | PanDA job id: 6747412697
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | task id: 45743349
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | errors: (none)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | pilot state: finished 
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | transexitcode: 0
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | exeerrorcode: 0
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | exeerrordiag: 
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | exitcode: 0
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | exitmsg: OK
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | cpuconsumptiontime: 38892 s
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | nevents: 400
[2025-07-27 17:37:27] 2025-07-27 21:36:53,606 | INFO     | neventsw: 0
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | pid: 623707
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | pgrp: 623707
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | corecount: 8
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | event service: False
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | sizes: {0: 2397475, 1: 2397475, 8: 2397765, 11: 2397793, 6026: 2424884, 6028: 2433882, 6031: 2434066, 6043: 2434260}
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | --------------------------------------------------
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | 
[2025-07-27 17:37:27] 2025-07-27 21:36:53,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 17:37:27] 2025-07-27 21:36:53,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | job 6747412697 has completed (purged errors)
[2025-07-27 17:37:27] 2025-07-27 21:36:53,660 | INFO     | overall cleanup function is called
[2025-07-27 17:37:27] 2025-07-27 21:36:54,668 | INFO     | --- collectZombieJob: --- 10, [623707]
[2025-07-27 17:37:27] 2025-07-27 21:36:54,668 | INFO     | zombie collector waiting for pid 623707
[2025-07-27 17:37:27] 2025-07-27 21:36:54,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:37:27] 2025-07-27 21:36:54,669 | INFO     | collected zombie processes
[2025-07-27 17:37:27] 2025-07-27 21:36:54,670 | INFO     | will attempt to kill all subprocesses of pid=623707
[2025-07-27 17:37:27] 2025-07-27 21:36:55,263 | INFO     | process IDs to be killed: [623707] (in reverse order)
[2025-07-27 17:37:27] 2025-07-27 21:36:55,433 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:37:27] 2025-07-27 21:36:55,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:37:27] 2025-07-27 21:36:55,453 | INFO     | did not find any defunct processes belonging to 623707
[2025-07-27 17:37:27] 2025-07-27 21:36:55,472 | INFO     | did not find any defunct processes belonging to 623707
[2025-07-27 17:37:27] 2025-07-27 21:36:55,473 | INFO     | ready for new job
[2025-07-27 17:37:27] 2025-07-27 21:36:55,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:37:27] 2025-07-27 21:36:55,475 | INFO     | ***************************************
[2025-07-27 17:37:27] 2025-07-27 21:36:55,475 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:37:27] 2025-07-27 21:36:55,475 | INFO     | ***************************************
[2025-07-27 17:37:27] 2025-07-27 21:36:55,475 | INFO     | 
[2025-07-27 17:37:27] 2025-07-27 21:36:55,481 | INFO     | architecture information:
[2025-07-27 17:37:27] 2025-07-27 21:36:55,481 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:37:27] 2025-07-27 21:36:55,503 | INFO     | cat /etc/os-release:
[2025-07-27 17:37:27] NAME="CentOS Linux"
[2025-07-27 17:37:27] VERSION="7 (Core)"
[2025-07-27 17:37:27] ID="centos"
[2025-07-27 17:37:27] ID_LIKE="rhel fedora"
[2025-07-27 17:37:27] VERSION_ID="7"
[2025-07-27 17:37:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:37:27] ANSI_COLOR="0;31"
[2025-07-27 17:37:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:37:27] HOME_URL="https://www.centos.org/"
[2025-07-27 17:37:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:37:27] 
[2025-07-27 17:37:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:37:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:37:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:37:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:37:27] 
[2025-07-27 17:37:27] 2025-07-27 21:36:55,504 | INFO     | ***************************************
[2025-07-27 17:37:27] 2025-07-27 21:36:56,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 17:37:27] 2025-07-27 21:36:56,033 | INFO     | sufficient remaining disk space (75845599232 B)
[2025-07-27 17:37:27] 2025-07-27 21:36:56,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:37:27] 2025-07-27 21:36:56,034 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:37:27] 2025-07-27 21:36:56,034 | INFO     | update_server=False
[2025-07-27 17:37:27] 2025-07-27 21:36:56,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:37:27] 2025-07-27 21:36:56,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:37:27] 2025-07-27 21:36:56,036 | INFO     | aborting loop
[2025-07-27 17:37:27] 2025-07-27 21:36:56,042 | INFO     | all payload control threads have been joined
[2025-07-27 17:37:27] 2025-07-27 21:36:56,382 | INFO     | all data control threads have been joined
[2025-07-27 17:37:27] 2025-07-27 21:36:56,487 | INFO     | all job control threads have been joined
[2025-07-27 17:37:27] 2025-07-27 21:36:56,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:37:27] 2025-07-27 21:36:56,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:37:27] 2025-07-27 21:36:57,039 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,043 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,046 | INFO     | [payload] control thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,128 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,276 | INFO     | [job] validate thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,299 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,387 | INFO     | [data] control thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,493 | INFO     | [job] control thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,525 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,725 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,779 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:57,848 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:58,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:58,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:37:27] 2025-07-27 21:36:58,893 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:36:59,627 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:37:00,921 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:37:27] 2025-07-27 21:37:02,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899086067520)>', '<ExcThread(monitor, started 139898073896704)>']
[2025-07-27 17:37:27] 2025-07-27 21:37:07,503 | INFO     | all workflow threads have been joined
[2025-07-27 17:37:27] 2025-07-27 21:37:07,503 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:37:27] 2025-07-27 21:37:07,503 | INFO     | traces error code: 0
[2025-07-27 17:37:27] 2025-07-27 21:37:07,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:37:27] 2025-07-27 21:37:27,013 | INFO     | PID=614453 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 17:37:27] 2025-07-27 21:37:27,013 | INFO     | .. there are 25 such processes running
[2025-07-27 17:37:27] 2025-07-27 21:37:27,014 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:37:27] 2025-07-27 21:37:27,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:37:27] 2025-07-27 21:37:27,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:37:27] 2025-07-27 21:37:27,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:37:27] 2025-07-27 21:37:27,014 | INFO     | [monitor] control thread has ended
[2025-07-27 17:37:27] 2025-07-27 21:37:27,200 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:37:27] 2025-07-27 21:37:27,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:37:27] 2025-07-27 21:37:27,213 [wrapper] pilotpid: 614453
[2025-07-27 17:37:27] 2025-07-27 21:37:27,218 [wrapper] Pilot exit status: 0
[2025-07-27 17:37:27] 2025-07-27 21:37:27,241 [wrapper] pandaids: 6747412697
[2025-07-27 17:37:27] 2025-07-27 21:37:27,363 [wrapper] cleanup supervisor_pilot 1007390 614454
[2025-07-27 17:37:27] 2025-07-27 21:37:27,368 [wrapper] Test setup, not cleaning
[2025-07-27 17:37:27] 2025-07-27 21:37:27,373 [wrapper] apfmon messages muted
[2025-07-27 17:37:27] 2025-07-27 21:37:27,376 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:37:27] 2025-07-27 21:37:27,379 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:37:27]  *** Error codes and diagnostics ***
[2025-07-27 17:37:27]     "exeErrorCode": 0,
[2025-07-27 17:37:27]     "exeErrorDiag": "",
[2025-07-27 17:37:27]     "pilotErrorCode": 0,
[2025-07-27 17:37:27]     "pilotErrorDiag": "",
[2025-07-27 17:37:27]  *** Listing of results directory ***
[2025-07-27 17:37:27] total 432104
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:04 queuedata.json
[2025-07-27 17:37:27] -rwx------. 1 boincer umatlas     36292 Jul 27 10:06 runpilot2-wrapper.sh
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:37:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:55 run_atlas
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:55 job.xml
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas 228737137 Jul 27 15:55 EVNT.45743347._002735.pool.root.1
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:55 start_atlas.sh
[2025-07-27 17:37:27] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:55 shared
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 15:55 input.tar.gz
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:55 boinc_lockfile
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:55 pandaJob.out
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas    980125 Jul 27 15:55 agis_schedconf.cvmfs.json
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:37:27] drwx------. 4 boincer umatlas      4096 Jul 27 15:55 pilot3
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas 208071050 Jul 27 17:36 HITS.45743349._049617.pool.root.1
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas       530 Jul 27 17:36 boinc_task_state.xml
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas      6934 Jul 27 17:36 init_data.xml
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas      1029 Jul 27 17:36 memory_monitor_summary.json
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas        95 Jul 27 17:36 pilot_heartbeat.json
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas    330037 Jul 27 17:36 log.45743349._049617.job.log.tgz.1
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas      7764 Jul 27 17:36 heartbeat.json
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:37 boinc_mmap_file
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas        27 Jul 27 17:37 wrapper_checkpoint.txt
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas       822 Jul 27 17:37 pilotlog.txt
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas    566560 Jul 27 17:37 log.45743349._049617.job.log.1
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas       357 Jul 27 17:37 output.list
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:37 runtime_log
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas    911360 Jul 27 17:37 result.tar.gz
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 17:37 runtime_log.err
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas       651 Jul 27 17:37 R5qNDmfCH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTTVLDmLfoPTm.diag
[2025-07-27 17:37:27] -rw-r--r--. 1 boincer umatlas     22432 Jul 27 17:37 stderr.txt
[2025-07-27 17:37:27] HITS file was successfully produced:
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas 208071050 Jul 27 17:36 shared/HITS.pool.root.1
[2025-07-27 17:37:27]  *** Contents of shared directory: ***
[2025-07-27 17:37:27] total 428020
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas 228737137 Jul 27 15:55 ATLAS.root_0
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:55 start_atlas.sh
[2025-07-27 17:37:27] -rw-r--r--. 2 boincer umatlas    542902 Jul 27 15:55 input.tar.gz
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas 208071050 Jul 27 17:36 HITS.pool.root.1
[2025-07-27 17:37:27] -rw-------. 1 boincer umatlas    911360 Jul 27 17:37 result.tar.gz
17:37:28 (610875): run_atlas exited; CPU time 39111.872962
17:37:28 (610875): called boinc_finish(0)

</stderr_txt>
]]>

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