Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:18:23 (2761212): wrapper (7.7.26015): starting
15:18:23 (2761212): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 15:18:23] Arguments: --nthreads 10
[2025-07-27 15:18:23] Threads: 10
[2025-07-27 15:18:23] Checking for CVMFS
[2025-07-27 15:18:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:18:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:18:23] 2.13.1.0 128519 5506 117592 148822 2 104 29408800 39288832 3925 16776704 0 4999537 99.516 6657952 43330 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 15:18:23] CVMFS is ok
[2025-07-27 15:18:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:18:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:18:23] Further information can be found at the LHC@home message board.
[2025-07-27 15:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:18:23] Checking for apptainer binary...
[2025-07-27 15:18:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:18:23] Running /usr/bin/apptainer --version
[2025-07-27 15:18:23] apptainer version 1.4.1-1.el9
[2025-07-27 15:18:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:18:24] c-211-3.aglt2.org
[2025-07-27 15:18:24] apptainer works
[2025-07-27 15:18:24] Set ATHENA_PROC_NUMBER=10
[2025-07-27 15:18:24] Set ATHENA_CORE_NUMBER=10
[2025-07-27 15:18:24] Starting ATLAS job with PandaID=6747376487
[2025-07-27 15:18:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:50:27]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:50:27] 2025-07-27 20:50:03,673 | INFO     | adding to output.list: log.45743349._047696.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/79/log.45743349._047696.job.log.tg
[2025-07-27 16:50:27] 2025-07-27 20:50:03,674 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:50:27] 2025-07-27 20:50:03,674 | INFO     | summary of transferred files:
[2025-07-27 16:50:27] 2025-07-27 20:50:03,674 | INFO     |  -- lfn=log.45743349._047696.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:50:27] 2025-07-27 20:50:03,675 | INFO     | stage-out finished correctly
[2025-07-27 16:50:27] 2025-07-27 20:50:05,481 | INFO     | 5494s have passed since pilot start - server update state is 'RUNNING'
[2025-07-27 16:50:27] 2025-07-27 20:50:07,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:50:27] 2025-07-27 20:50:08,269 | WARNING  | process 2771193 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 16:50:27] 2025-07-27 20:50:08,269 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376487/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,270 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376487/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,272 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4148183 B
[2025-07-27 16:50:27] 2025-07-27 20:50:08,272 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15791 B
[2025-07-27 16:50:27] 2025-07-27 20:50:08,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:50:27] 2025-07-27 20:50:08,287 | INFO     | sufficient remaining disk space (53826551808 B)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,287 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,288 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747376487: 4451972 B (within 2537553920 B limit)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,288 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747376487/HITS.45743349._047696.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,288 | INFO     | total size of present files: 0 B (workdir size: 4451972 B)
[2025-07-27 16:50:27] 2025-07-27 20:50:08,288 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747376487/HITS.45743349._047696.pool.root.1 since it does not exist
[2025-07-27 16:50:27] 2025-07-27 20:50:08,456 | INFO     | number of running child processes to parent process 2771193: 1
[2025-07-27 16:50:27] 2025-07-27 20:50:08,456 | INFO     | maximum number of monitored processes: 6
[2025-07-27 16:50:27] 2025-07-27 20:50:09,780 | INFO     | job 6747376487 has state=finished
[2025-07-27 16:50:27] 2025-07-27 20:50:09,780 | INFO     | preparing for final server update for job 6747376487 in state='finished'
[2025-07-27 16:50:27] 2025-07-27 20:50:09,781 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:50:27] 2025-07-27 20:50:09,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:50:27] 2025-07-27 20:50:09,782 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:50:27] 2025-07-27 20:50:09,782 | INFO     | job 6747376487 has finished - writing final server update
[2025-07-27 16:50:27] 2025-07-27 20:50:09,782 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:50:27] 2025-07-27 20:50:09,783 | INFO     | executing command: lscpu
[2025-07-27 16:50:27] 2025-07-27 20:50:09,821 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:50:27] 2025-07-27 20:50:10,960 | INFO     | monitor loop #411: job 0:6747376487 is in state 'finished'
[2025-07-27 16:50:27] 2025-07-27 20:50:10,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,463 | INFO     | monitor loop #412: job 0:6747376487 is in state 'finished'
[2025-07-27 16:50:27] 2025-07-27 20:50:13,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,607 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:50:27] 2025-07-27 20:50:13,611 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8062249999994
[2025-07-27 16:50:27] 2025-07-27 20:50:13,617 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376487/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,618 | INFO     | extracted standard info from prmon json
[2025-07-27 16:50:27] 2025-07-27 20:50:13,618 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:50:27] 2025-07-27 20:50:13,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:50:27] 2025-07-27 20:50:13,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:50:27] 2025-07-27 20:50:13,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:50:27] 2025-07-27 20:50:13,621 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:50:27] 2025-07-27 20:50:13,621 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | sum of deviations: -19617032029.000004
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | mean x: 1753646746.0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | mean y: 2896105.56626506
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | -- intersect: 194058308470.3099
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | intersect: 194058308470.3099
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | chi2: 0.13203411683605695
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | -- intersect: 194058308470.3099
[2025-07-27 16:50:27] 2025-07-27 20:50:13,622 | INFO     | current memory leak: -110.66 B/s (using 83 data points, chi2=0.13)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | could have reported an average CPU frequency of 2605 MHz (7 samples)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | ..............................
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | . Timing measurements:
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | . get job = 0 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | . initial setup = 2 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | . payload setup = 6 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,623 | INFO     | . stage-in = 0 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,624 | INFO     | . payload execution = 5462 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,624 | INFO     | . stage-out = 0 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,624 | INFO     | . log creation = 0 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,624 | INFO     | ..............................
[2025-07-27 16:50:27] 2025-07-27 20:50:13,726 | INFO     | 
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | job summary report
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | --------------------------------------------------
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | PanDA job id: 6747376487
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | task id: 45743349
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | errors: (none)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:50:27] 2025-07-27 20:50:13,727 | INFO     | pilot state: finished 
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | transexitcode: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | exeerrorcode: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | exeerrordiag: 
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | exitcode: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | exitmsg: OK
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | cpuconsumptiontime: 50840 s
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | nevents: 400
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | neventsw: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,728 | INFO     | pid: 2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | pgrp: 2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | corecount: 10
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | event service: False
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | sizes: {0: 2397475, 1: 2397475, 4: 2397765, 11: 2397793, 5472: 2424443, 5475: 2433441, 5478: 2433625, 5484: 2433847}
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | --------------------------------------------------
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | 
[2025-07-27 16:50:27] 2025-07-27 20:50:13,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:50:27] 2025-07-27 20:50:13,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:50:27] 2025-07-27 20:50:13,754 | INFO     | job 6747376487 has completed (purged errors)
[2025-07-27 16:50:27] 2025-07-27 20:50:13,754 | INFO     | overall cleanup function is called
[2025-07-27 16:50:27] 2025-07-27 20:50:14,762 | INFO     | --- collectZombieJob: --- 10, [2771193]
[2025-07-27 16:50:27] 2025-07-27 20:50:14,762 | INFO     | zombie collector waiting for pid 2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:14,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:50:27] 2025-07-27 20:50:14,762 | INFO     | collected zombie processes
[2025-07-27 16:50:27] 2025-07-27 20:50:14,763 | INFO     | will attempt to kill all subprocesses of pid=2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:14,845 | INFO     | PID=2764801 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 16:50:27] 2025-07-27 20:50:14,845 | INFO     | .. there are 5 such processes running
[2025-07-27 16:50:27] 2025-07-27 20:50:15,040 | INFO     | process IDs to be killed: [2771193] (in reverse order)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,109 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:50:27] 2025-07-27 20:50:15,119 | INFO     | did not find any defunct processes belonging to 2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:15,128 | INFO     | did not find any defunct processes belonging to 2771193
[2025-07-27 16:50:27] 2025-07-27 20:50:15,128 | INFO     | ready for new job
[2025-07-27 16:50:27] 2025-07-27 20:50:15,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:50:27] 2025-07-27 20:50:15,130 | INFO     | ***************************************
[2025-07-27 16:50:27] 2025-07-27 20:50:15,131 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:50:27] 2025-07-27 20:50:15,131 | INFO     | ***************************************
[2025-07-27 16:50:27] 2025-07-27 20:50:15,131 | INFO     | 
[2025-07-27 16:50:27] 2025-07-27 20:50:15,133 | INFO     | architecture information:
[2025-07-27 16:50:27] 2025-07-27 20:50:15,133 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:50:27] 2025-07-27 20:50:15,150 | INFO     | cat /etc/os-release:
[2025-07-27 16:50:27] NAME="CentOS Linux"
[2025-07-27 16:50:27] VERSION="7 (Core)"
[2025-07-27 16:50:27] ID="centos"
[2025-07-27 16:50:27] ID_LIKE="rhel fedora"
[2025-07-27 16:50:27] VERSION_ID="7"
[2025-07-27 16:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:50:27] ANSI_COLOR="0;31"
[2025-07-27 16:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:50:27] HOME_URL="https://www.centos.org/"
[2025-07-27 16:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:50:27] 
[2025-07-27 16:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:50:27] 
[2025-07-27 16:50:27] 2025-07-27 20:50:15,150 | INFO     | ***************************************
[2025-07-27 16:50:27] 2025-07-27 20:50:15,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:50:27] 2025-07-27 20:50:15,670 | INFO     | sufficient remaining disk space (53831794688 B)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:50:27] 2025-07-27 20:50:15,671 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:50:27] 2025-07-27 20:50:15,671 | INFO     | update_server=False
[2025-07-27 16:50:27] 2025-07-27 20:50:15,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:50:27] 2025-07-27 20:50:15,671 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,672 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:50:27] 2025-07-27 20:50:15,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:50:27] 2025-07-27 20:50:15,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:50:27] 2025-07-27 20:50:15,966 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 16:50:27] 2025-07-27 20:50:15,966 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 16:50:27] 2025-07-27 20:50:15,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:50:27] 2025-07-27 20:50:15,966 | INFO     | will abort loop
[2025-07-27 16:50:27] 2025-07-27 20:50:16,226 | INFO     | all data control threads have been joined
[2025-07-27 16:50:27] 2025-07-27 20:50:16,246 | INFO     | all job control threads have been joined
[2025-07-27 16:50:27] 2025-07-27 20:50:16,246 | INFO     | all payload control threads have been joined
[2025-07-27 16:50:27] 2025-07-27 20:50:16,676 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:16,676 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:16,801 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:16,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:50:27] 2025-07-27 20:50:16,972 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,231 | INFO     | [data] control thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,248 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,251 | INFO     | [payload] control thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,251 | INFO     | [job] control thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,358 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,478 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,700 | INFO     | [job] validate thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:17,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:50:27] 2025-07-27 20:50:17,889 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:18,000 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:18,812 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:21,729 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:50:27] 2025-07-27 20:50:22,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146963072832)>', '<ExcThread(monitor, started 140146259261184)>']
[2025-07-27 16:50:27] 2025-07-27 20:50:22,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:50:27] 2025-07-27 20:50:22,707 | INFO     | [monitor] control thread has ended
[2025-07-27 16:50:27] 2025-07-27 20:50:27,207 | INFO     | all workflow threads have been joined
[2025-07-27 16:50:27] 2025-07-27 20:50:27,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:50:27] 2025-07-27 20:50:27,208 | INFO     | traces error code: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:27,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:50:27] 2025-07-27 20:50:27,376 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:50:27] 2025-07-27 20:50:27,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:50:27] 2025-07-27 20:50:27,384 [wrapper] pilotpid: 2764801
[2025-07-27 16:50:27] 2025-07-27 20:50:27,388 [wrapper] Pilot exit status: 0
[2025-07-27 16:50:27] 2025-07-27 20:50:27,402 [wrapper] pandaids: 6747376487
[2025-07-27 16:50:27] 2025-07-27 20:50:27,449 [wrapper] cleanup supervisor_pilot 2882467 2764802
[2025-07-27 16:50:27] 2025-07-27 20:50:27,454 [wrapper] Test setup, not cleaning
[2025-07-27 16:50:27] 2025-07-27 20:50:27,458 [wrapper] apfmon messages muted
[2025-07-27 16:50:27] 2025-07-27 20:50:27,463 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:50:27] 2025-07-27 20:50:27,467 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:50:27]  *** Error codes and diagnostics ***
[2025-07-27 16:50:27]     "exeErrorCode": 0,
[2025-07-27 16:50:27]     "exeErrorDiag": "",
[2025-07-27 16:50:27]     "pilotErrorCode": 0,
[2025-07-27 16:50:27]     "pilotErrorDiag": "",
[2025-07-27 16:50:27]  *** Listing of results directory ***
[2025-07-27 16:50:27] total 430952
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 16:50:27] -rwx------. 1 boincer umatlas     36292 Jul 27 07:45 runpilot2-wrapper.sh
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:45 queuedata.json
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:50:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:18 run_atlas
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:18 job.xml
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas 230398966 Jul 27 15:18 EVNT.45743347._002646.pool.root.1
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:18 start_atlas.sh
[2025-07-27 16:50:27] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:18 shared
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 15:18 input.tar.gz
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:18 boinc_lockfile
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:18 pandaJob.out
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas    980125 Jul 27 15:18 agis_schedconf.cvmfs.json
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:18 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:50:27] drwx------. 4 boincer umatlas      4096 Jul 27 15:18 pilot3
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas 205220562 Jul 27 16:49 HITS.45743349._047696.pool.root.1
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:49 boinc_task_state.xml
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas      6655 Jul 27 16:49 init_data.xml
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas      1042 Jul 27 16:49 memory_monitor_summary.json
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas        95 Jul 27 16:50 pilot_heartbeat.json
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas    357829 Jul 27 16:50 log.45743349._047696.job.log.tgz.1
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:50 wrapper_checkpoint.txt
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:50 boinc_mmap_file
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas      7819 Jul 27 16:50 heartbeat.json
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas      4666 Jul 27 16:50 pilotlog.txt
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas    541581 Jul 27 16:50 log.45743349._047696.job.log.1
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas       357 Jul 27 16:50 output.list
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:50 runtime_log
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas    921600 Jul 27 16:50 result.tar.gz
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas       651 Jul 27 16:50 vVmLDmP0E07n9Rq4apOajLDm4fhM0noT9bVof3QYDmTU2KDmCJTUom.diag
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 16:50 runtime_log.err
[2025-07-27 16:50:27] -rw-r--r--. 1 boincer umatlas     22614 Jul 27 16:50 stderr.txt
[2025-07-27 16:50:27] HITS file was successfully produced:
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas 205220562 Jul 27 16:49 shared/HITS.pool.root.1
[2025-07-27 16:50:27]  *** Contents of shared directory: ***
[2025-07-27 16:50:27] total 426860
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas 230398966 Jul 27 15:18 ATLAS.root_0
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:18 start_atlas.sh
[2025-07-27 16:50:27] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 15:18 input.tar.gz
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas 205220562 Jul 27 16:49 HITS.pool.root.1
[2025-07-27 16:50:27] -rw-------. 1 boincer umatlas    921600 Jul 27 16:50 result.tar.gz
16:50:29 (2761212): run_atlas exited; CPU time 50906.542515
16:50:29 (2761212): called boinc_finish(0)

</stderr_txt>
]]>

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