Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:51:10 (3401582): wrapper (7.7.26015): starting
15:51:10 (3401582): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:51:10] Arguments: --nthreads 8
[2025-07-27 15:51:10] Threads: 8
[2025-07-27 15:51:10] Checking for CVMFS
[2025-07-27 15:51:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:51:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:51:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:51:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:51:11] 2.13.0.0 1483043 18823 291300 148822 2 632 32913496 40960000 21553 16776704 0 84784514 99.679 98839324 18862 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 15:51:11] CVMFS is ok
[2025-07-27 15:51:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:51:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:51:11] Further information can be found at the LHC@home message board.
[2025-07-27 15:51:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:51:11] Checking for apptainer binary...
[2025-07-27 15:51:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:51:11] Running /usr/bin/apptainer --version
[2025-07-27 15:51:11] apptainer version 1.4.1-1.el9
[2025-07-27 15:51:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:51:11] c7-4-30.aglt2.org
[2025-07-27 15:51:11] apptainer works
[2025-07-27 15:51:11] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:51:11] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:51:11] Starting ATLAS job with PandaID=6747376201
[2025-07-27 15:51:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:14:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:14:33]  status_code=0
[2025-07-27 17:14:33]  storage_token=
[2025-07-27 17:14:33]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747376201/log.45743349._047436.job.log.tgz.1
[2025-07-27 17:14:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/76/log.45743349._047436.job.log.tgz.1
[2025-07-27 17:14:33]  workdir=None
[2025-07-27 17:14:33] ]
[2025-07-27 17:14:33] 2025-07-27 21:13:51,169 | INFO     | transferring file log.45743349._047436.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747376201/log.45743349._047436.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:14:33] 2025-07-27 21:13:51,170 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747376201/log.45743349._047436.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._047436.job
[2025-07-27 17:14:33] 2025-07-27 21:13:51,191 | INFO     | adding to output.list: log.45743349._047436.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/76/log.45743349._047436.job.log.tg
[2025-07-27 17:14:33] 2025-07-27 21:13:51,192 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:14:33] 2025-07-27 21:13:51,192 | INFO     | summary of transferred files:
[2025-07-27 17:14:33] 2025-07-27 21:13:51,192 | INFO     |  -- lfn=log.45743349._047436.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:14:33] 2025-07-27 21:13:51,193 | INFO     | stage-out finished correctly
[2025-07-27 17:14:33] 2025-07-27 21:13:53,238 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:14:33] 2025-07-27 21:13:53,562 | WARNING  | process 3412773 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:14:33] 2025-07-27 21:13:53,562 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747376201/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:14:33] 2025-07-27 21:13:54,058 | INFO     | number of running child processes to parent process 3412773: 1
[2025-07-27 17:14:33] 2025-07-27 21:13:54,058 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:14:33] 2025-07-27 21:13:54,865 | INFO     | PID=3405943 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 17:14:33] 2025-07-27 21:13:54,865 | INFO     | .. there are 35 such processes running
[2025-07-27 17:14:33] 2025-07-27 21:13:55,516 | INFO     | job 6747376201 has state=finished
[2025-07-27 17:14:33] 2025-07-27 21:13:55,516 | INFO     | preparing for final server update for job 6747376201 in state='finished'
[2025-07-27 17:14:33] 2025-07-27 21:13:55,517 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:14:33] 2025-07-27 21:13:55,517 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:14:33] 2025-07-27 21:13:55,517 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:14:33] 2025-07-27 21:13:55,517 | INFO     | job 6747376201 has finished - writing final server update
[2025-07-27 17:14:33] 2025-07-27 21:13:55,517 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:14:33] 2025-07-27 21:13:55,519 | INFO     | executing command: lscpu
[2025-07-27 17:14:33] 2025-07-27 21:13:55,585 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:14:33] 2025-07-27 21:13:56,562 | INFO     | monitor loop #358: job 0:6747376201 is in state 'finished'
[2025-07-27 17:14:33] 2025-07-27 21:13:56,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:14:33] 2025-07-27 21:13:59,066 | INFO     | monitor loop #359: job 0:6747376201 is in state 'finished'
[2025-07-27 17:14:33] 2025-07-27 21:13:59,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,369 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 17:14:33] 2025-07-27 21:14:01,375 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3034.0742187499995
[2025-07-27 17:14:33] 2025-07-27 21:14:01,389 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747376201/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,389 | INFO     | extracted standard info from prmon json
[2025-07-27 17:14:33] 2025-07-27 21:14:01,390 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:14:33] 2025-07-27 21:14:01,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:14:33] 2025-07-27 21:14:01,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:14:33] 2025-07-27 21:14:01,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | sum of deviations: -11679722124.500004
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | mean x: 1753648447.5
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | mean y: 2293858.9864864866
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | -- intersect: 163037267783.84662
[2025-07-27 17:14:33] 2025-07-27 21:14:01,392 | INFO     | intersect: 163037267783.84662
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | chi2: 0.17407711664691675
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | -- intersect: 163037267783.84662
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | current memory leak: -92.97 B/s (using 74 data points, chi2=0.17)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | could have reported an average CPU frequency of 3045 MHz (6 samples)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | ..............................
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | . Timing measurements:
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | . get job = 0 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | . initial setup = 2 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,393 | INFO     | . payload setup = 8 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,394 | INFO     | . stage-in = 0 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,394 | INFO     | . payload execution = 4919 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,394 | INFO     | . stage-out = 0 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,394 | INFO     | . log creation = 0 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,394 | INFO     | ..............................
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | 
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | job summary report
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | --------------------------------------------------
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | PanDA job id: 6747376201
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | task id: 45743349
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | errors: (none)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:14:33] 2025-07-27 21:14:01,461 | INFO     | pilot state: finished 
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | transexitcode: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | exeerrorcode: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | exeerrordiag: 
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | exitcode: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | exitmsg: OK
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | cpuconsumptiontime: 36661 s
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | nevents: 400
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | neventsw: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | pid: 3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | pgrp: 3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | corecount: 8
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | event service: False
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 4929: 2423905, 4930: 2432903, 4932: 2432959, 4940: 2433281}
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | --------------------------------------------------
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | 
[2025-07-27 17:14:33] 2025-07-27 21:14:01,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 17:14:33] 2025-07-27 21:14:01,485 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | job 6747376201 has completed (purged errors)
[2025-07-27 17:14:33] 2025-07-27 21:14:01,487 | INFO     | overall cleanup function is called
[2025-07-27 17:14:33] 2025-07-27 21:14:02,495 | INFO     | --- collectZombieJob: --- 10, [3412773]
[2025-07-27 17:14:33] 2025-07-27 21:14:02,496 | INFO     | zombie collector waiting for pid 3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:02,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:14:33] 2025-07-27 21:14:02,496 | INFO     | collected zombie processes
[2025-07-27 17:14:33] 2025-07-27 21:14:02,496 | INFO     | will attempt to kill all subprocesses of pid=3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:02,943 | INFO     | process IDs to be killed: [3412773] (in reverse order)
[2025-07-27 17:14:33] 2025-07-27 21:14:03,091 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:14:33] 2025-07-27 21:14:03,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:14:33] 2025-07-27 21:14:03,111 | INFO     | did not find any defunct processes belonging to 3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:03,131 | INFO     | did not find any defunct processes belonging to 3412773
[2025-07-27 17:14:33] 2025-07-27 21:14:03,131 | INFO     | ready for new job
[2025-07-27 17:14:33] 2025-07-27 21:14:03,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:14:33] 2025-07-27 21:14:03,133 | INFO     | ***************************************
[2025-07-27 17:14:33] 2025-07-27 21:14:03,133 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:14:33] 2025-07-27 21:14:03,133 | INFO     | ***************************************
[2025-07-27 17:14:33] 2025-07-27 21:14:03,133 | INFO     | 
[2025-07-27 17:14:33] 2025-07-27 21:14:03,150 | INFO     | architecture information:
[2025-07-27 17:14:33] 2025-07-27 21:14:03,151 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:14:33] 2025-07-27 21:14:03,167 | INFO     | cat /etc/os-release:
[2025-07-27 17:14:33] NAME="CentOS Linux"
[2025-07-27 17:14:33] VERSION="7 (Core)"
[2025-07-27 17:14:33] ID="centos"
[2025-07-27 17:14:33] ID_LIKE="rhel fedora"
[2025-07-27 17:14:33] VERSION_ID="7"
[2025-07-27 17:14:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:14:33] ANSI_COLOR="0;31"
[2025-07-27 17:14:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:14:33] HOME_URL="https://www.centos.org/"
[2025-07-27 17:14:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:14:33] 
[2025-07-27 17:14:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:14:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:14:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:14:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:14:33] 
[2025-07-27 17:14:33] 2025-07-27 21:14:03,167 | INFO     | ***************************************
[2025-07-27 17:14:33] 2025-07-27 21:14:03,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 17:14:33] 2025-07-27 21:14:03,693 | INFO     | sufficient remaining disk space (128677052416 B)
[2025-07-27 17:14:33] 2025-07-27 21:14:03,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:14:33] 2025-07-27 21:14:03,693 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:14:33] 2025-07-27 21:14:03,693 | INFO     | update_server=False
[2025-07-27 17:14:33] 2025-07-27 21:14:03,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:14:33] 2025-07-27 21:14:03,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:14:33] 2025-07-27 21:14:04,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 17:14:33] 2025-07-27 21:14:04,078 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 17:14:33] 2025-07-27 21:14:04,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:14:33] 2025-07-27 21:14:04,078 | INFO     | will abort loop
[2025-07-27 17:14:33] 2025-07-27 21:14:04,221 | INFO     | all data control threads have been joined
[2025-07-27 17:14:33] 2025-07-27 21:14:04,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:14:33] 2025-07-27 21:14:04,325 | INFO     | all payload control threads have been joined
[2025-07-27 17:14:33] 2025-07-27 21:14:04,699 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,014 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,083 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,226 | INFO     | [data] control thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,331 | INFO     | [payload] control thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,364 | INFO     | all job control threads have been joined
[2025-07-27 17:14:33] 2025-07-27 21:14:05,488 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,616 | INFO     | [job] validate thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,888 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:05,986 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:06,126 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:06,146 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:06,298 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:06,369 | INFO     | [job] control thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:06,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:14:33] 2025-07-27 21:14:07,478 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:07,816 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:14,476 | INFO     | job.realtimelogging is not enabled
[2025-07-27 17:14:33] 2025-07-27 21:14:15,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:14:33] 2025-07-27 21:14:17,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076782618432)>', '<ExcThread(monitor, started 140076289861376)>']
[2025-07-27 17:14:33] 2025-07-27 21:14:22,402 | INFO     | all workflow threads have been joined
[2025-07-27 17:14:33] 2025-07-27 21:14:22,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:14:33] 2025-07-27 21:14:22,402 | INFO     | traces error code: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:22,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:14:33] 2025-07-27 21:14:31,885 | INFO     | 4959s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 17:14:33] 2025-07-27 21:14:33,485 | INFO     | PID=3405943 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:14:33] 2025-07-27 21:14:33,488 | INFO     | .. there are 35 such processes running
[2025-07-27 17:14:33] 2025-07-27 21:14:33,488 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:14:33] 2025-07-27 21:14:33,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:14:33] 2025-07-27 21:14:33,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:14:33] 2025-07-27 21:14:33,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:14:33] 2025-07-27 21:14:33,489 | INFO     | [monitor] control thread has ended
[2025-07-27 17:14:33] 2025-07-27 21:14:33,639 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:14:33] 2025-07-27 21:14:33,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:14:33] 2025-07-27 21:14:33,647 [wrapper] pilotpid: 3405943
[2025-07-27 17:14:33] 2025-07-27 21:14:33,652 [wrapper] Pilot exit status: 0
[2025-07-27 17:14:33] 2025-07-27 21:14:33,667 [wrapper] pandaids: 6747376201
[2025-07-27 17:14:33] 2025-07-27 21:14:33,783 [wrapper] cleanup supervisor_pilot 3747719 3405944
[2025-07-27 17:14:33] 2025-07-27 21:14:33,787 [wrapper] Test setup, not cleaning
[2025-07-27 17:14:33] 2025-07-27 21:14:33,790 [wrapper] apfmon messages muted
[2025-07-27 17:14:33] 2025-07-27 21:14:33,795 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:14:33] 2025-07-27 21:14:33,799 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:14:33]  *** Error codes and diagnostics ***
[2025-07-27 17:14:33]     "exeErrorCode": 0,
[2025-07-27 17:14:33]     "exeErrorDiag": "",
[2025-07-27 17:14:33]     "pilotErrorCode": 0,
[2025-07-27 17:14:33]     "pilotErrorDiag": "",
[2025-07-27 17:14:33]  *** Listing of results directory ***
[2025-07-27 17:14:33] total 436124
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:53 pilot3.tar.gz
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:04 queuedata.json
[2025-07-27 17:14:33] -rwx------. 1 boincer umatlas     36292 Jul 27 07:04 runpilot2-wrapper.sh
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:14:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:51 run_atlas
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:51 job.xml
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas 229362608 Jul 27 15:51 EVNT.45743347._002636.pool.root.1
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:51 start_atlas.sh
[2025-07-27 17:14:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:51 shared
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 15:51 input.tar.gz
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:51 boinc_lockfile
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:51 pandaJob.out
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas    980125 Jul 27 15:51 agis_schedconf.cvmfs.json
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:14:33] drwx------. 4 boincer umatlas      4096 Jul 27 15:51 pilot3
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas 211774051 Jul 27 17:13 HITS.45743349._047436.pool.root.1
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas       529 Jul 27 17:13 boinc_task_state.xml
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas      6935 Jul 27 17:13 init_data.xml
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas      1027 Jul 27 17:13 memory_monitor_summary.json
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas    308634 Jul 27 17:13 log.45743349._047436.job.log.tgz.1
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas        95 Jul 27 17:13 pilot_heartbeat.json
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas      7767 Jul 27 17:14 heartbeat.json
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas        27 Jul 27 17:14 wrapper_checkpoint.txt
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas       938 Jul 27 17:14 pilotlog.txt
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:14 boinc_mmap_file
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas    481978 Jul 27 17:14 log.45743349._047436.job.log.1
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas       357 Jul 27 17:14 output.list
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:14 runtime_log
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas    808960 Jul 27 17:14 result.tar.gz
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 17:14 runtime_log.err
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas       650 Jul 27 17:14 ffWNDmSME07n9Rq4apOajLDm4fhM0noT9bVof3QYDmhS2KDmzCtoWn.diag
[2025-07-27 17:14:33] -rw-r--r--. 1 boincer umatlas     22217 Jul 27 17:14 stderr.txt
[2025-07-27 17:14:33] HITS file was successfully produced:
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas 211774051 Jul 27 17:13 shared/HITS.pool.root.1
[2025-07-27 17:14:33]  *** Contents of shared directory: ***
[2025-07-27 17:14:33] total 432144
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas 229362608 Jul 27 15:51 ATLAS.root_0
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:51 start_atlas.sh
[2025-07-27 17:14:33] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 15:51 input.tar.gz
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas 211774051 Jul 27 17:13 HITS.pool.root.1
[2025-07-27 17:14:33] -rw-------. 1 boincer umatlas    808960 Jul 27 17:14 result.tar.gz
17:14:35 (3401582): run_atlas exited; CPU time 36848.015898
17:14:35 (3401582): called boinc_finish(0)

</stderr_txt>
]]>

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