Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:58:53 (272153): wrapper (7.7.26015): starting
14:58:53 (272153): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 14:58:53] Arguments: --nthreads 8
[2025-07-27 14:58:53] Threads: 8
[2025-07-27 14:58:53] Checking for CVMFS
[2025-07-27 14:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:58:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:58:53] 2.13.1.0 3153527 8762 150872 148821 2 188 22432294 40960000 12797 16776704 0 120167414 99.999 312897 59474 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:58:53] CVMFS is ok
[2025-07-27 14:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:58:53] Further information can be found at the LHC@home message board.
[2025-07-27 14:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:58:53] Checking for apptainer binary...
[2025-07-27 14:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:58:53] Running /usr/bin/apptainer --version
[2025-07-27 14:58:53] apptainer version 1.4.1-1.el9
[2025-07-27 14:58:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:58:54] c-208-37.aglt2.org
[2025-07-27 14:58:54] apptainer works
[2025-07-27 14:58:54] Set ATHENA_PROC_NUMBER=8
[2025-07-27 14:58:54] Set ATHENA_CORE_NUMBER=8
[2025-07-27 14:58:54] Starting ATLAS job with PandaID=6746781888
[2025-07-27 14:58:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:52:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:52:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:52:22]  replicas=None
[2025-07-27 15:52:22]  scope=mc23_13p6TeV
[2025-07-27 15:52:22]  status=None
[2025-07-27 15:52:22]  status_code=0
[2025-07-27 15:52:22]  storage_token=
[2025-07-27 15:52:22]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6746781888/log.45759290._000077.job.log.tgz.1
[2025-07-27 15:52:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/ec/log.45759290._000077.job.log.tgz.1
[2025-07-27 15:52:22]  workdir=None
[2025-07-27 15:52:22] ]
[2025-07-27 15:52:22] 2025-07-27 19:51:42,649 | INFO     | transferring file log.45759290._000077.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6746781888/log.45759290._000077.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:52:22] 2025-07-27 19:51:42,649 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6746781888/log.45759290._000077.job.log.tgz.1 /tmp/boinchome/slots/8/log.45759290._000077.job
[2025-07-27 15:52:22] 2025-07-27 19:51:42,667 | INFO     | adding to output.list: log.45759290._000077.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/ec/log.45759290._000077.job.log.tg
[2025-07-27 15:52:22] 2025-07-27 19:51:42,668 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:52:22] 2025-07-27 19:51:42,668 | INFO     | summary of transferred files:
[2025-07-27 15:52:22] 2025-07-27 19:51:42,668 | INFO     |  -- lfn=log.45759290._000077.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:52:22] 2025-07-27 19:51:42,668 | INFO     | stage-out finished correctly
[2025-07-27 15:52:22] 2025-07-27 19:51:43,443 | WARNING  | process 282272 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 15:52:22] 2025-07-27 19:51:43,444 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6746781888/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:52:22] 2025-07-27 19:51:43,781 | INFO     | number of running child processes to parent process 282272: 1
[2025-07-27 15:52:22] 2025-07-27 19:51:43,781 | INFO     | maximum number of monitored processes: 6
[2025-07-27 15:52:22] 2025-07-27 19:51:45,958 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:52:22] 2025-07-27 19:51:46,016 | INFO     | job 6746781888 has state=finished
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | preparing for final server update for job 6746781888 in state='finished'
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | job 6746781888 has finished - writing final server update
[2025-07-27 15:52:22] 2025-07-27 19:51:46,017 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:52:22] 2025-07-27 19:51:46,019 | INFO     | executing command: lscpu
[2025-07-27 15:52:22] 2025-07-27 19:51:46,078 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:52:22] 2025-07-27 19:51:46,284 | INFO     | monitor loop #235: job 0:6746781888 is in state 'finished'
[2025-07-27 15:52:22] 2025-07-27 19:51:46,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:52:22] 2025-07-27 19:51:48,787 | INFO     | monitor loop #236: job 0:6746781888 is in state 'finished'
[2025-07-27 15:52:22] 2025-07-27 19:51:48,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,458 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 15:52:22] 2025-07-27 19:51:49,463 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3713.980039062499
[2025-07-27 15:52:22] 2025-07-27 19:51:49,476 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6746781888/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,476 | INFO     | extracted standard info from prmon json
[2025-07-27 15:52:22] 2025-07-27 19:51:49,476 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:52:22] 2025-07-27 19:51:49,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:52:22] 2025-07-27 19:51:49,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:52:22] 2025-07-27 19:51:49,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | sum of square deviations: 28242390.0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | sum of deviations: 235648002.00000003
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | mean x: 1753644414.0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | mean y: 2531932.1333333333
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | -- intersect: -14629473446.220303
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | intersect: -14629473446.220303
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | chi2: 0.0003924806220453718
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | -- intersect: -14629473446.220303
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | current memory leak: 8.34 B/s (using 45 data points, chi2=0.00)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,478 | INFO     | could have reported an average CPU frequency of 3750 MHz (5 samples)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | ..............................
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . Timing measurements:
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . get job = 0 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . initial setup = 2 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . payload setup = 5 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . stage-in = 0 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . payload execution = 3135 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . stage-out = 0 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | . log creation = 0 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,479 | INFO     | ..............................
[2025-07-27 15:52:22] 2025-07-27 19:51:49,535 | INFO     | 
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | job summary report
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | --------------------------------------------------
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | PanDA job id: 6746781888
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | task id: 45759290
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | errors: (none)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | pilot state: finished 
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | transexitcode: 0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | exeerrorcode: 0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | exeerrordiag: 
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | exitcode: 0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | exitmsg: OK
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | cpuconsumptiontime: 23115 s
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | nevents: 400
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | neventsw: 0
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | pid: 282272
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | pgrp: 282272
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | corecount: 8
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | event service: False
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | sizes: {0: 2397465, 4: 2397727, 11: 2397755, 3145: 2423240, 3146: 2432238, 3149: 2432294, 3153: 2432648}
[2025-07-27 15:52:22] 2025-07-27 19:51:49,536 | INFO     | --------------------------------------------------
[2025-07-27 15:52:22] 2025-07-27 19:51:49,537 | INFO     | 
[2025-07-27 15:52:22] 2025-07-27 19:51:49,537 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-27 15:52:22] 2025-07-27 19:51:49,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | job 6746781888 has completed (purged errors)
[2025-07-27 15:52:22] 2025-07-27 19:51:49,554 | INFO     | overall cleanup function is called
[2025-07-27 15:52:22] 2025-07-27 19:51:50,560 | INFO     | --- collectZombieJob: --- 10, [282272]
[2025-07-27 15:52:22] 2025-07-27 19:51:50,561 | INFO     | zombie collector waiting for pid 282272
[2025-07-27 15:52:22] 2025-07-27 19:51:50,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:52:22] 2025-07-27 19:51:50,561 | INFO     | collected zombie processes
[2025-07-27 15:52:22] 2025-07-27 19:51:50,561 | INFO     | will attempt to kill all subprocesses of pid=282272
[2025-07-27 15:52:22] 2025-07-27 19:51:50,879 | INFO     | process IDs to be killed: [282272] (in reverse order)
[2025-07-27 15:52:22] 2025-07-27 19:51:50,988 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:52:22] 2025-07-27 19:51:50,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:52:22] 2025-07-27 19:51:51,003 | INFO     | did not find any defunct processes belonging to 282272
[2025-07-27 15:52:22] 2025-07-27 19:51:51,014 | INFO     | did not find any defunct processes belonging to 282272
[2025-07-27 15:52:22] 2025-07-27 19:51:51,014 | INFO     | ready for new job
[2025-07-27 15:52:22] 2025-07-27 19:51:51,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:52:22] 2025-07-27 19:51:51,015 | INFO     | ***************************************
[2025-07-27 15:52:22] 2025-07-27 19:51:51,016 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:52:22] 2025-07-27 19:51:51,016 | INFO     | ***************************************
[2025-07-27 15:52:22] 2025-07-27 19:51:51,016 | INFO     | 
[2025-07-27 15:52:22] 2025-07-27 19:51:51,020 | INFO     | architecture information:
[2025-07-27 15:52:22] 2025-07-27 19:51:51,020 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:52:22] 2025-07-27 19:51:51,033 | INFO     | cat /etc/os-release:
[2025-07-27 15:52:22] NAME="CentOS Linux"
[2025-07-27 15:52:22] VERSION="7 (Core)"
[2025-07-27 15:52:22] ID="centos"
[2025-07-27 15:52:22] ID_LIKE="rhel fedora"
[2025-07-27 15:52:22] VERSION_ID="7"
[2025-07-27 15:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:52:22] ANSI_COLOR="0;31"
[2025-07-27 15:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:52:22] HOME_URL="https://www.centos.org/"
[2025-07-27 15:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:52:22] 
[2025-07-27 15:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:52:22] 
[2025-07-27 15:52:22] 2025-07-27 19:51:51,033 | INFO     | ***************************************
[2025-07-27 15:52:22] 2025-07-27 19:51:51,536 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-27 15:52:22] 2025-07-27 19:51:51,552 | INFO     | sufficient remaining disk space (165924569088 B)
[2025-07-27 15:52:22] 2025-07-27 19:51:51,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:52:22] 2025-07-27 19:51:51,552 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:52:22] 2025-07-27 19:51:51,552 | INFO     | update_server=False
[2025-07-27 15:52:22] 2025-07-27 19:51:51,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:52:22] 2025-07-27 19:51:51,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:52:22] 2025-07-27 19:51:52,000 | INFO     | all data control threads have been joined
[2025-07-27 15:52:22] 2025-07-27 19:51:52,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:52:22] 2025-07-27 19:51:52,201 | INFO     | all payload control threads have been joined
[2025-07-27 15:52:22] 2025-07-27 19:51:52,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:52:22] 2025-07-27 19:51:52,292 | INFO     | aborting loop
[2025-07-27 15:52:22] 2025-07-27 19:51:52,503 | INFO     | all job control threads have been joined
[2025-07-27 15:52:22] 2025-07-27 19:51:52,558 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:52,617 | INFO     | [job] validate thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:52,761 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:52,862 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,006 | INFO     | [data] control thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,037 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,205 | INFO     | [payload] control thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,293 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,509 | INFO     | [job] control thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,558 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,710 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:53,800 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:54,088 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:54,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:52:22] 2025-07-27 19:51:55,552 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:51:56,032 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:52:02,363 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:52:22] 2025-07-27 19:52:03,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:52:22] 2025-07-27 19:52:05,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907497936704)>', '<ExcThread(monitor, started 139906328286976)>']
[2025-07-27 15:52:22] 2025-07-27 19:52:10,144 | INFO     | all workflow threads have been joined
[2025-07-27 15:52:22] 2025-07-27 19:52:10,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:52:22] 2025-07-27 19:52:10,145 | INFO     | traces error code: 0
[2025-07-27 15:52:22] 2025-07-27 19:52:10,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:52:22] 2025-07-27 19:52:22,589 | INFO     | PID=275835 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 15:52:22] 2025-07-27 19:52:22,589 | INFO     | .. there are 15 such processes running
[2025-07-27 15:52:22] 2025-07-27 19:52:22,590 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:52:22] 2025-07-27 19:52:22,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:52:22] 2025-07-27 19:52:22,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:52:22] 2025-07-27 19:52:22,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:52:22] 2025-07-27 19:52:22,591 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 15:52:22] 2025-07-27 19:52:22,591 | INFO     | [monitor] control thread has ended
[2025-07-27 15:52:22] 2025-07-27 19:52:22,670 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:52:22] 2025-07-27 19:52:22,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:52:22] 2025-07-27 19:52:22,674 [wrapper] pilotpid: 275835
[2025-07-27 15:52:22] 2025-07-27 19:52:22,675 [wrapper] Pilot exit status: 0
[2025-07-27 15:52:22] 2025-07-27 19:52:22,682 [wrapper] pandaids: 6746781888
[2025-07-27 15:52:22] 2025-07-27 19:52:22,763 [wrapper] cleanup supervisor_pilot  536815 275836
[2025-07-27 15:52:22] 2025-07-27 19:52:22,765 [wrapper] Test setup, not cleaning
[2025-07-27 15:52:22] 2025-07-27 19:52:22,768 [wrapper] apfmon messages muted
[2025-07-27 15:52:22] 2025-07-27 19:52:22,770 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:52:22] 2025-07-27 19:52:22,772 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:52:22]  *** Error codes and diagnostics ***
[2025-07-27 15:52:22]     "exeErrorCode": 0,
[2025-07-27 15:52:22]     "exeErrorDiag": "",
[2025-07-27 15:52:22]     "pilotErrorCode": 0,
[2025-07-27 15:52:22]     "pilotErrorDiag": "",
[2025-07-27 15:52:22]  *** Listing of results directory ***
[2025-07-27 15:52:22] total 412584
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:38 pilot3.tar.gz
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 05:01 queuedata.json
[2025-07-27 15:52:22] -rwx------. 1 boincer umatlas     36292 Jul 27 05:01 runpilot2-wrapper.sh
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:52:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:58 run_atlas
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:58 job.xml
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas 245328118 Jul 27 14:58 EVNT.45759282._000001.pool.root.1
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:58 start_atlas.sh
[2025-07-27 15:52:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:58 shared
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 14:58 input.tar.gz
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:58 boinc_lockfile
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 14:58 pandaJob.out
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas    980125 Jul 27 14:59 agis_schedconf.cvmfs.json
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:59 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:52:22] drwx------. 4 boincer umatlas      4096 Jul 27 14:59 pilot3
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas      7174 Jul 27 15:45 init_data.xml
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas 172070446 Jul 27 15:51 HITS.45759290._000077.pool.root.1
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:51 boinc_task_state.xml
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas      1027 Jul 27 15:51 memory_monitor_summary.json
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas    275854 Jul 27 15:51 log.45759290._000077.job.log.tgz.1
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas      7753 Jul 27 15:51 heartbeat.json
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:52 boinc_mmap_file
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:52 wrapper_checkpoint.txt
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas        95 Jul 27 15:52 pilot_heartbeat.json
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas       892 Jul 27 15:52 pilotlog.txt
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas    328843 Jul 27 15:52 log.45759290._000077.job.log.1
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas       357 Jul 27 15:52 output.list
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:52 runtime_log
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas    624640 Jul 27 15:52 result.tar.gz
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas       651 Jul 27 15:52 SQeLDm7QC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSpULDmxx16um.diag
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 15:52 runtime_log.err
[2025-07-27 15:52:22] -rw-r--r--. 1 boincer umatlas     21871 Jul 27 15:52 stderr.txt
[2025-07-27 15:52:22] HITS file was successfully produced:
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas 172070446 Jul 27 15:51 shared/HITS.pool.root.1
[2025-07-27 15:52:22]  *** Contents of shared directory: ***
[2025-07-27 15:52:22] total 408784
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas 245328118 Jul 27 14:58 ATLAS.root_0
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:58 start_atlas.sh
[2025-07-27 15:52:22] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 14:58 input.tar.gz
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas 172070446 Jul 27 15:51 HITS.pool.root.1
[2025-07-27 15:52:22] -rw-------. 1 boincer umatlas    624640 Jul 27 15:52 result.tar.gz
15:52:24 (272153): run_atlas exited; CPU time 23166.717949
15:52:24 (272153): called boinc_finish(0)

</stderr_txt>
]]>

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