Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:09:06 (2308538): wrapper (7.7.26015): starting
15:09:06 (2308538): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:09:06] Arguments: --nthreads 8
[2025-07-27 15:09:06] Threads: 8
[2025-07-27 15:09:06] Checking for CVMFS
[2025-07-27 15:09:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:09:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:09:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:09:07] 2.13.1.0 116762 8794 203996 148821 1 188 34932918 40960001 12916 16776704 0 122638788 99.999 338379 39015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 15:09:07] CVMFS is ok
[2025-07-27 15:09:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:09:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:09:07] Further information can be found at the LHC@home message board.
[2025-07-27 15:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:09:07] Checking for apptainer binary...
[2025-07-27 15:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:09:07] Running /usr/bin/apptainer --version
[2025-07-27 15:09:07] apptainer version 1.4.1-1.el9
[2025-07-27 15:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:09:07] c-208-39.aglt2.org
[2025-07-27 15:09:07] apptainer works
[2025-07-27 15:09:07] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:09:07] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:09:07] Starting ATLAS job with PandaID=6747412303
[2025-07-27 15:09:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:06:06]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:06:06]  is_altstaged=None
[2025-07-27 16:06:06]  is_tar=False
[2025-07-27 16:06:06]  lfn=log.45743349._049405.job.log.tgz.1
[2025-07-27 16:06:06]  mtime=0
[2025-07-27 16:06:06]  protocol_id=None
[2025-07-27 16:06:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:06:06]  replicas=None
[2025-07-27 16:06:06]  scope=mc23_13p6TeV
[2025-07-27 16:06:06]  status=None
[2025-07-27 16:06:06]  status_code=0
[2025-07-27 16:06:06]  storage_token=
[2025-07-27 16:06:06]  surl=/tmp/boinchome/slots/14/PanDA_Pilot-6747412303/log.45743349._049405.job.log.tgz.1
[2025-07-27 16:06:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/88/log.45743349._049405.job.log.tgz.1
[2025-07-27 16:06:06]  workdir=None
[2025-07-27 16:06:06] ]
[2025-07-27 16:06:06] 2025-07-27 20:05:28,482 | INFO     | transferring file log.45743349._049405.job.log.tgz.1 from /tmp/boinchome/slots/14/PanDA_Pilot-6747412303/log.45743349._049405.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 16:06:06] 2025-07-27 20:05:28,482 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/14/PanDA_Pilot-6747412303/log.45743349._049405.job.log.tgz.1 /tmp/boinchome/slots/14/log.45743349._049405.j
[2025-07-27 16:06:06] 2025-07-27 20:05:28,501 | INFO     | adding to output.list: log.45743349._049405.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/88/log.45743349._049405.job.log.tg
[2025-07-27 16:06:06] 2025-07-27 20:05:28,501 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:06:06] 2025-07-27 20:05:28,502 | INFO     | summary of transferred files:
[2025-07-27 16:06:06] 2025-07-27 20:05:28,502 | INFO     |  -- lfn=log.45743349._049405.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:06:06] 2025-07-27 20:05:28,502 | INFO     | stage-out finished correctly
[2025-07-27 16:06:06] 2025-07-27 20:05:28,672 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:06:06] 2025-07-27 20:05:29,078 | INFO     | job 6747412303 has state=finished
[2025-07-27 16:06:06] 2025-07-27 20:05:29,078 | INFO     | preparing for final server update for job 6747412303 in state='finished'
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | job 6747412303 has finished - writing final server update
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:06:06] 2025-07-27 20:05:29,079 | INFO     | executing command: lscpu
[2025-07-27 16:06:06] 2025-07-27 20:05:29,132 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:06:06] 2025-07-27 20:05:29,406 | INFO     | monitor loop #246: job 0:6747412303 is in state 'finished'
[2025-07-27 16:06:06] 2025-07-27 20:05:29,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:06:06] 2025-07-27 20:05:31,909 | INFO     | monitor loop #247: job 0:6747412303 is in state 'finished'
[2025-07-27 16:06:06] 2025-07-27 20:05:31,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:06:06] 2025-07-27 20:05:32,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:06:06] 2025-07-27 20:05:32,611 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3778.626023437502
[2025-07-27 16:06:06] 2025-07-27 20:05:32,625 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6747412303/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:06:06] 2025-07-27 20:05:32,626 | INFO     | extracted standard info from prmon json
[2025-07-27 16:06:06] 2025-07-27 20:05:32,626 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:06:06] 2025-07-27 20:05:32,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:06:06] 2025-07-27 20:05:32,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:06:06] 2025-07-27 20:05:32,626 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | sum of square deviations: 34277852.0
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | sum of deviations: 494357206.5
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | mean x: 1753645119.5
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | mean y: 2512262.9375
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | -- intersect: -25288661246.662186
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | intersect: -25288661246.662186
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | chi2: 0.00027402117285776944
[2025-07-27 16:06:06] 2025-07-27 20:05:32,627 | INFO     | -- intersect: -25288661246.662186
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | current memory leak: 14.42 B/s (using 48 data points, chi2=0.00)
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | could have reported an average CPU frequency of 3765 MHz (5 samples)
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | ..............................
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . Timing measurements:
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . get job = 0 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . initial setup = 2 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . payload setup = 5 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . stage-in = 0 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . payload execution = 3347 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . stage-out = 0 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | . log creation = 0 s
[2025-07-27 16:06:06] 2025-07-27 20:05:32,628 | INFO     | ..............................
[2025-07-27 16:06:06] 2025-07-27 20:05:33,176 | INFO     | 
[2025-07-27 16:06:06] 2025-07-27 20:05:33,176 | INFO     | job summary report
[2025-07-27 16:06:06] 2025-07-27 20:05:33,176 | INFO     | --------------------------------------------------
[2025-07-27 16:06:06] 2025-07-27 20:05:33,176 | INFO     | PanDA job id: 6747412303
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | task id: 45743349
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | errors: (none)
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | pilot state: finished 
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | transexitcode: 0
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | exeerrorcode: 0
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | exeerrordiag: 
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | exitcode: 0
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | exitmsg: OK
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | cpuconsumptiontime: 24811 s
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | nevents: 400
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | neventsw: 0
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | pid: 2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | pgrp: 2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | corecount: 8
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | event service: False
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | sizes: {0: 2397305, 1: 2397504, 5: 2397766, 11: 2397822, 3356: 2423531, 3358: 2432715, 3362: 2432885}
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | --------------------------------------------------
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | 
[2025-07-27 16:06:06] 2025-07-27 20:05:33,177 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | job 6747412303 has completed (purged errors)
[2025-07-27 16:06:06] 2025-07-27 20:05:33,194 | INFO     | overall cleanup function is called
[2025-07-27 16:06:06] 2025-07-27 20:05:34,202 | INFO     | --- collectZombieJob: --- 10, [2322153]
[2025-07-27 16:06:06] 2025-07-27 20:05:34,202 | INFO     | zombie collector waiting for pid 2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:34,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:06:06] 2025-07-27 20:05:34,202 | INFO     | collected zombie processes
[2025-07-27 16:06:06] 2025-07-27 20:05:34,202 | INFO     | will attempt to kill all subprocesses of pid=2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:34,573 | INFO     | process IDs to be killed: [2322153] (in reverse order)
[2025-07-27 16:06:06] 2025-07-27 20:05:34,695 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:06:06] 2025-07-27 20:05:34,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:06:06] 2025-07-27 20:05:34,711 | INFO     | did not find any defunct processes belonging to 2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:34,725 | INFO     | did not find any defunct processes belonging to 2322153
[2025-07-27 16:06:06] 2025-07-27 20:05:34,725 | INFO     | ready for new job
[2025-07-27 16:06:06] 2025-07-27 20:05:34,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:06:06] 2025-07-27 20:05:34,726 | INFO     | ***************************************
[2025-07-27 16:06:06] 2025-07-27 20:05:34,726 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:06:06] 2025-07-27 20:05:34,726 | INFO     | ***************************************
[2025-07-27 16:06:06] 2025-07-27 20:05:34,727 | INFO     | 
[2025-07-27 16:06:06] 2025-07-27 20:05:34,731 | INFO     | architecture information:
[2025-07-27 16:06:06] 2025-07-27 20:05:34,731 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:06:06] 2025-07-27 20:05:34,745 | INFO     | cat /etc/os-release:
[2025-07-27 16:06:06] NAME="CentOS Linux"
[2025-07-27 16:06:06] VERSION="7 (Core)"
[2025-07-27 16:06:06] ID="centos"
[2025-07-27 16:06:06] ID_LIKE="rhel fedora"
[2025-07-27 16:06:06] VERSION_ID="7"
[2025-07-27 16:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:06:06] ANSI_COLOR="0;31"
[2025-07-27 16:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:06:06] HOME_URL="https://www.centos.org/"
[2025-07-27 16:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:06:06] 
[2025-07-27 16:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:06:06] 
[2025-07-27 16:06:06] 2025-07-27 20:05:34,745 | INFO     | ***************************************
[2025-07-27 16:06:06] 2025-07-27 20:05:35,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-07-27 16:06:06] 2025-07-27 20:05:35,264 | INFO     | sufficient remaining disk space (165870043136 B)
[2025-07-27 16:06:06] 2025-07-27 20:05:35,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:06:06] 2025-07-27 20:05:35,265 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:06:06] 2025-07-27 20:05:35,265 | INFO     | update_server=False
[2025-07-27 16:06:06] 2025-07-27 20:05:35,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:06:06] 2025-07-27 20:05:35,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:06:06] 2025-07-27 20:05:35,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:06:06] 2025-07-27 20:05:35,418 | INFO     | aborting loop
[2025-07-27 16:06:06] 2025-07-27 20:05:35,933 | INFO     | all job control threads have been joined
[2025-07-27 16:06:06] 2025-07-27 20:05:35,975 | INFO     | all data control threads have been joined
[2025-07-27 16:06:06] 2025-07-27 20:05:36,270 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:36,415 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:36,422 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:36,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:06:06] 2025-07-27 20:05:36,736 | INFO     | all payload control threads have been joined
[2025-07-27 16:06:06] 2025-07-27 20:05:36,937 | INFO     | [job] control thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:36,976 | INFO     | [data] control thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,064 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,112 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,213 | INFO     | [job] validate thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,336 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,344 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:06:06] 2025-07-27 20:05:37,741 | INFO     | [payload] control thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:37,748 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:38,576 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:38,705 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:39,268 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:45,632 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:06:06] 2025-07-27 20:05:46,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:06:06] 2025-07-27 20:05:46,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709718361920)>', '<ExcThread(monitor, started 140709092910848)>']
[2025-07-27 16:06:06] 2025-07-27 20:05:51,736 | INFO     | all workflow threads have been joined
[2025-07-27 16:06:06] 2025-07-27 20:05:51,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:06:06] 2025-07-27 20:05:51,737 | INFO     | traces error code: 0
[2025-07-27 16:06:06] 2025-07-27 20:05:51,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | INFO     | PID=2312139 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | INFO     | .. there are 16 such processes running
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:06:06] 2025-07-27 20:06:06,536 | INFO     | [monitor] control thread has ended
[2025-07-27 16:06:06] 2025-07-27 20:06:06,650 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:06:06] 2025-07-27 20:06:06,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:06:06] 2025-07-27 20:06:06,657 [wrapper] pilotpid: 2312139
[2025-07-27 16:06:06] 2025-07-27 20:06:06,660 [wrapper] Pilot exit status: 0
[2025-07-27 16:06:06] 2025-07-27 20:06:06,669 [wrapper] pandaids: 6747412303
[2025-07-27 16:06:06] 2025-07-27 20:06:06,754 [wrapper] cleanup supervisor_pilot 2564180 2312140
[2025-07-27 16:06:06] 2025-07-27 20:06:06,757 [wrapper] Test setup, not cleaning
[2025-07-27 16:06:06] 2025-07-27 20:06:06,759 [wrapper] apfmon messages muted
[2025-07-27 16:06:06] 2025-07-27 20:06:06,761 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:06:06] 2025-07-27 20:06:06,763 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:06:06]  *** Error codes and diagnostics ***
[2025-07-27 16:06:06]     "exeErrorCode": 0,
[2025-07-27 16:06:06]     "exeErrorDiag": "",
[2025-07-27 16:06:06]     "pilotErrorCode": 0,
[2025-07-27 16:06:06]     "pilotErrorDiag": "",
[2025-07-27 16:06:06]  *** Listing of results directory ***
[2025-07-27 16:06:06] total 435656
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:42 queuedata.json
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 16:06:06] -rwx------. 1 boincer umatlas     36292 Jul 27 09:42 runpilot2-wrapper.sh
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:06:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:09 run_atlas
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:09 job.xml
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas 230201175 Jul 27 15:09 EVNT.45743347._002727.pool.root.1
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:09 start_atlas.sh
[2025-07-27 16:06:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:09 shared
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 15:09 input.tar.gz
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:09 boinc_lockfile
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:09 pandaJob.out
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas    980125 Jul 27 15:09 agis_schedconf.cvmfs.json
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:09 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:06:06] drwx------. 4 boincer umatlas      4096 Jul 27 15:09 pilot3
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas      7175 Jul 27 16:03 init_data.xml
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas 210762151 Jul 27 16:05 HITS.45743349._049405.pool.root.1
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:05 boinc_task_state.xml
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas        95 Jul 27 16:05 pilot_heartbeat.json
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas      1027 Jul 27 16:05 memory_monitor_summary.json
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas    286843 Jul 27 16:05 log.45743349._049405.job.log.tgz.1
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas      7765 Jul 27 16:05 heartbeat.json
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:06 boinc_mmap_file
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:06 wrapper_checkpoint.txt
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas       823 Jul 27 16:06 pilotlog.txt
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas    346057 Jul 27 16:06 log.45743349._049405.job.log.1
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas       357 Jul 27 16:06 output.list
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:06 runtime_log
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas    655360 Jul 27 16:06 result.tar.gz
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas      8674 Jul 27 16:06 runtime_log.err
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas       651 Jul 27 16:06 9t9MDmNpG07n9Rq4apOajLDm4fhM0noT9bVof3QYDmkd2KDmqAYnVo.diag
[2025-07-27 16:06:06] -rw-r--r--. 1 boincer umatlas     21473 Jul 27 16:06 stderr.txt
[2025-07-27 16:06:06] HITS file was successfully produced:
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas 210762151 Jul 27 16:05 shared/HITS.pool.root.1
[2025-07-27 16:06:06]  *** Contents of shared directory: ***
[2025-07-27 16:06:06] total 431828
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas 230201175 Jul 27 15:09 ATLAS.root_0
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:09 start_atlas.sh
[2025-07-27 16:06:06] -rw-r--r--. 2 boincer umatlas    542903 Jul 27 15:09 input.tar.gz
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas 210762151 Jul 27 16:05 HITS.pool.root.1
[2025-07-27 16:06:06] -rw-------. 1 boincer umatlas    655360 Jul 27 16:06 result.tar.gz
16:06:08 (2308538): run_atlas exited; CPU time 24903.600503
16:06:08 (2308538): called boinc_finish(0)

</stderr_txt>
]]>

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