Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:52:09 (31598): wrapper (7.7.26015): starting
14:52:09 (31598): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 14:52:09] Arguments: --nthreads 12
[2025-07-27 14:52:09] Threads: 12
[2025-07-27 14:52:09] Checking for CVMFS
[2025-07-27 14:52:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:52:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:52:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:52:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:52:09] 2.11.2.0 2979 112386 102296 148821 1 59 15864804 20275200 1 130560 0 38436304 99.971 9529914 10581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:52:09] CVMFS is ok
[2025-07-27 14:52:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:52:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:52:09] Further information can be found at the LHC@home message board.
[2025-07-27 14:52:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:52:09] Checking for apptainer binary...
[2025-07-27 14:52:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:52:09] Running /usr/bin/apptainer --version
[2025-07-27 14:52:09] apptainer version 1.3.2-1.el7
[2025-07-27 14:52:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:52:11] c-205-7.aglt2.org
[2025-07-27 14:52:11] apptainer works
[2025-07-27 14:52:11] Set ATHENA_PROC_NUMBER=12
[2025-07-27 14:52:11] Set ATHENA_CORE_NUMBER=12
[2025-07-27 14:52:11] Starting ATLAS job with PandaID=6747412145
[2025-07-27 14:52:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:15:38]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:15:38]  mtime=0
[2025-07-27 16:15:38]  protocol_id=None
[2025-07-27 16:15:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:15:38]  replicas=None
[2025-07-27 16:15:38]  scope=mc23_13p6TeV
[2025-07-27 16:15:38]  status=None
[2025-07-27 16:15:38]  status_code=0
[2025-07-27 16:15:38]  storage_token=
[2025-07-27 16:15:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747412145/log.45743349._049247.job.log.tgz.1
[2025-07-27 16:15:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/ba/log.45743349._049247.job.log.tgz.1
[2025-07-27 16:15:38]  workdir=None
[2025-07-27 16:15:38] ]
[2025-07-27 16:15:38] 2025-07-27 20:14:54,739 | INFO     | transferring file log.45743349._049247.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747412145/log.45743349._049247.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:15:38] 2025-07-27 20:14:54,739 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747412145/log.45743349._049247.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049247.job
[2025-07-27 16:15:38] 2025-07-27 20:14:54,761 | INFO     | adding to output.list: log.45743349._049247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/ba/log.45743349._049247.job.log.tg
[2025-07-27 16:15:38] 2025-07-27 20:14:54,762 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:15:38] 2025-07-27 20:14:54,762 | INFO     | summary of transferred files:
[2025-07-27 16:15:38] 2025-07-27 20:14:54,763 | INFO     |  -- lfn=log.45743349._049247.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:15:38] 2025-07-27 20:14:54,763 | INFO     | stage-out finished correctly
[2025-07-27 16:15:38] 2025-07-27 20:14:56,520 | INFO     | monitor loop #369: job 0:6747412145 is in state 'finished'
[2025-07-27 16:15:38] 2025-07-27 20:14:56,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:15:38] 2025-07-27 20:14:58,289 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:15:38] 2025-07-27 20:14:59,023 | INFO     | monitor loop #370: job 0:6747412145 is in state 'finished'
[2025-07-27 16:15:38] 2025-07-27 20:14:59,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:15:38] 2025-07-27 20:15:00,079 | INFO     | job 6747412145 has state=finished
[2025-07-27 16:15:38] 2025-07-27 20:15:00,079 | INFO     | preparing for final server update for job 6747412145 in state='finished'
[2025-07-27 16:15:38] 2025-07-27 20:15:00,080 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:15:38] 2025-07-27 20:15:00,080 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:15:38] 2025-07-27 20:15:00,080 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:15:38] 2025-07-27 20:15:00,080 | INFO     | job 6747412145 has finished - writing final server update
[2025-07-27 16:15:38] 2025-07-27 20:15:00,081 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:15:38] 2025-07-27 20:15:00,082 | INFO     | executing command: lscpu
[2025-07-27 16:15:38] 2025-07-27 20:15:00,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:15:38] 2025-07-27 20:15:01,527 | INFO     | monitor loop #371: job 0:6747412145 is in state 'finished'
[2025-07-27 16:15:38] 2025-07-27 20:15:01,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:15:38] 2025-07-27 20:15:04,030 | INFO     | monitor loop #372: job 0:6747412145 is in state 'finished'
[2025-07-27 16:15:38] 2025-07-27 20:15:04,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,075 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 16:15:38] 2025-07-27 20:15:05,078 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.25
[2025-07-27 16:15:38] 2025-07-27 20:15:05,080 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412145/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,080 | INFO     | extracted standard info from prmon json
[2025-07-27 16:15:38] 2025-07-27 20:15:05,080 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:15:38] 2025-07-27 20:15:05,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:15:38] 2025-07-27 20:15:05,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:15:38] 2025-07-27 20:15:05,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:15:38] 2025-07-27 20:15:05,083 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:15:38] 2025-07-27 20:15:05,083 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 16:15:38] 2025-07-27 20:15:05,083 | INFO     | sum of deviations: -5654731353.999997
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | mean x: 1753644906.5
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | mean y: 2733742.135135135
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | -- intersect: 78935871659.9831
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | intersect: 78935871659.9831
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | chi2: 0.08402122606103346
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | -- intersect: 78935871659.9831
[2025-07-27 16:15:38] 2025-07-27 20:15:05,084 | INFO     | current memory leak: -45.01 B/s (using 74 data points, chi2=0.08)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | ..............................
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | . Timing measurements:
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | . get job = 0 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | . initial setup = 2 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | . payload setup = 9 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,085 | INFO     | . stage-in = 0 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,086 | INFO     | . payload execution = 4920 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,086 | INFO     | . stage-out = 0 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,086 | INFO     | . log creation = 0 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,086 | INFO     | ..............................
[2025-07-27 16:15:38] 2025-07-27 20:15:05,310 | INFO     | 
[2025-07-27 16:15:38] 2025-07-27 20:15:05,310 | INFO     | job summary report
[2025-07-27 16:15:38] 2025-07-27 20:15:05,310 | INFO     | --------------------------------------------------
[2025-07-27 16:15:38] 2025-07-27 20:15:05,310 | INFO     | PanDA job id: 6747412145
[2025-07-27 16:15:38] 2025-07-27 20:15:05,310 | INFO     | task id: 45743349
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | errors: (none)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | pilot state: finished 
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | transexitcode: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | exeerrorcode: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:05,311 | INFO     | exeerrordiag: 
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | exitcode: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | exitmsg: OK
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | cpuconsumptiontime: 52912 s
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | nevents: 400
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | neventsw: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | pid: 9406
[2025-07-27 16:15:38] 2025-07-27 20:15:05,312 | INFO     | pgrp: 9406
[2025-07-27 16:15:38] 2025-07-27 20:15:05,313 | INFO     | corecount: 12
[2025-07-27 16:15:38] 2025-07-27 20:15:05,313 | INFO     | event service: False
[2025-07-27 16:15:38] 2025-07-27 20:15:05,313 | INFO     | sizes: {0: 2397473, 5: 2397735, 11: 2397791, 4933: 2424034, 4934: 2433032, 4937: 2433088, 4944: 2433410}
[2025-07-27 16:15:38] 2025-07-27 20:15:05,313 | INFO     | --------------------------------------------------
[2025-07-27 16:15:38] 2025-07-27 20:15:05,313 | INFO     | 
[2025-07-27 16:15:38] 2025-07-27 20:15:05,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:15:38] 2025-07-27 20:15:05,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:15:38] 2025-07-27 20:15:05,405 | INFO     | job 6747412145 has completed (purged errors)
[2025-07-27 16:15:38] 2025-07-27 20:15:05,405 | INFO     | overall cleanup function is called
[2025-07-27 16:15:38] 2025-07-27 20:15:06,413 | INFO     | --- collectZombieJob: --- 10, [9406]
[2025-07-27 16:15:38] 2025-07-27 20:15:06,413 | INFO     | zombie collector waiting for pid 9406
[2025-07-27 16:15:38] 2025-07-27 20:15:06,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:15:38] 2025-07-27 20:15:06,413 | INFO     | collected zombie processes
[2025-07-27 16:15:38] 2025-07-27 20:15:06,413 | INFO     | will attempt to kill all subprocesses of pid=9406
[2025-07-27 16:15:38] 2025-07-27 20:15:06,503 | INFO     | process IDs to be killed: [9406] (in reverse order)
[2025-07-27 16:15:38] 2025-07-27 20:15:06,550 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:15:38] 2025-07-27 20:15:06,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:15:38] 2025-07-27 20:15:06,553 | INFO     | did not find any defunct processes belonging to 9406
[2025-07-27 16:15:38] 2025-07-27 20:15:06,555 | INFO     | did not find any defunct processes belonging to 9406
[2025-07-27 16:15:38] 2025-07-27 20:15:06,555 | INFO     | ready for new job
[2025-07-27 16:15:38] 2025-07-27 20:15:06,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:15:38] 2025-07-27 20:15:06,556 | INFO     | ***************************************
[2025-07-27 16:15:38] 2025-07-27 20:15:06,556 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:15:38] 2025-07-27 20:15:06,556 | INFO     | ***************************************
[2025-07-27 16:15:38] 2025-07-27 20:15:06,557 | INFO     | 
[2025-07-27 16:15:38] 2025-07-27 20:15:06,557 | INFO     | architecture information:
[2025-07-27 16:15:38] 2025-07-27 20:15:06,558 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:15:38] 2025-07-27 20:15:06,572 | INFO     | cat /etc/os-release:
[2025-07-27 16:15:38] NAME="CentOS Linux"
[2025-07-27 16:15:38] VERSION="7 (Core)"
[2025-07-27 16:15:38] ID="centos"
[2025-07-27 16:15:38] ID_LIKE="rhel fedora"
[2025-07-27 16:15:38] VERSION_ID="7"
[2025-07-27 16:15:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:15:38] ANSI_COLOR="0;31"
[2025-07-27 16:15:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:15:38] HOME_URL="https://www.centos.org/"
[2025-07-27 16:15:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:15:38] 
[2025-07-27 16:15:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:15:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:15:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:15:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:15:38] 
[2025-07-27 16:15:38] 2025-07-27 20:15:06,572 | INFO     | ***************************************
[2025-07-27 16:15:38] 2025-07-27 20:15:07,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:15:38] 2025-07-27 20:15:07,091 | INFO     | sufficient remaining disk space (29352787968 B)
[2025-07-27 16:15:38] 2025-07-27 20:15:07,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:15:38] 2025-07-27 20:15:07,092 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:15:38] 2025-07-27 20:15:07,092 | INFO     | update_server=False
[2025-07-27 16:15:38] 2025-07-27 20:15:07,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:15:38] 2025-07-27 20:15:07,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:15:38] 2025-07-27 20:15:07,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:15:38] 2025-07-27 20:15:07,535 | INFO     | aborting loop
[2025-07-27 16:15:38] 2025-07-27 20:15:07,651 | INFO     | all payload control threads have been joined
[2025-07-27 16:15:38] 2025-07-27 20:15:07,665 | INFO     | all data control threads have been joined
[2025-07-27 16:15:38] 2025-07-27 20:15:07,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:15:38] 2025-07-27 20:15:08,064 | INFO     | all job control threads have been joined
[2025-07-27 16:15:38] 2025-07-27 20:15:08,097 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,098 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,157 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,353 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,411 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,540 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,656 | INFO     | [payload] control thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,670 | INFO     | [data] control thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,717 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:08,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:15:38] 2025-07-27 20:15:09,065 | INFO     | [job] control thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:09,118 | INFO     | [job] validate thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:09,339 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:09,649 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:09,871 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:12,888 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:17,923 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:15:38] 2025-07-27 20:15:18,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:15:38] 2025-07-27 20:15:19,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324465788736)>', '<ExcThread(monitor, started 140323275659008)>']
[2025-07-27 16:15:38] 2025-07-27 20:15:24,424 | INFO     | all workflow threads have been joined
[2025-07-27 16:15:38] 2025-07-27 20:15:24,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:15:38] 2025-07-27 20:15:24,424 | INFO     | traces error code: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:24,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:15:38] 2025-07-27 20:15:37,787 | INFO     | PID=2968 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 16:15:38] 2025-07-27 20:15:37,788 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:15:38] 2025-07-27 20:15:37,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:15:38] 2025-07-27 20:15:37,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:15:38] 2025-07-27 20:15:37,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:15:38] 2025-07-27 20:15:37,788 | INFO     | [monitor] control thread has ended
[2025-07-27 16:15:38] 2025-07-27 20:15:37,878 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:15:38] 2025-07-27 20:15:37,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:15:38] 2025-07-27 20:15:37,886 [wrapper] pilotpid: 2968
[2025-07-27 16:15:38] 2025-07-27 20:15:37,890 [wrapper] Pilot exit status: 0
[2025-07-27 16:15:38] 2025-07-27 20:15:37,905 [wrapper] pandaids: 6747412145
[2025-07-27 16:15:38] 2025-07-27 20:15:37,944 [wrapper] cleanup supervisor_pilot 27954 2969
[2025-07-27 16:15:38] 2025-07-27 20:15:37,948 [wrapper] Test setup, not cleaning
[2025-07-27 16:15:38] 2025-07-27 20:15:37,952 [wrapper] apfmon messages muted
[2025-07-27 16:15:38] 2025-07-27 20:15:37,956 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:15:38] 2025-07-27 20:15:37,959 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:15:38]  *** Error codes and diagnostics ***
[2025-07-27 16:15:38]     "exeErrorCode": 0,
[2025-07-27 16:15:38]     "exeErrorDiag": "",
[2025-07-27 16:15:38]     "pilotErrorCode": 0,
[2025-07-27 16:15:38]     "pilotErrorDiag": "",
[2025-07-27 16:15:38]  *** Listing of results directory ***
[2025-07-27 16:15:38] total 431108
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 09:35 queuedata.json
[2025-07-27 16:15:38] -rwx------ 1 boincer umatlas     36292 Jul 27 09:36 runpilot2-wrapper.sh
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas       100 Jul 27 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:15:38] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 14:52 run_atlas
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas       105 Jul 27 14:52 job.xml
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas 228187181 Jul 27 14:52 EVNT.45743347._002721.pool.root.1
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 14:52 start_atlas.sh
[2025-07-27 16:15:38] drwxrwx--x 2 boincer umatlas      4096 Jul 27 14:52 shared
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 14:52 input.tar.gz
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas         0 Jul 27 14:52 boinc_lockfile
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 14:52 pandaJob.out
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas    980125 Jul 27 14:52 agis_schedconf.cvmfs.json
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas   1593052 Jul 27 14:52 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:15:38] drwx------ 4 boincer umatlas      4096 Jul 27 14:52 pilot3
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 16:12 init_data.xml
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas 207750203 Jul 27 16:14 HITS.45743349._049247.pool.root.1
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas       529 Jul 27 16:14 boinc_task_state.xml
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas      1046 Jul 27 16:14 memory_monitor_summary.json
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas    354689 Jul 27 16:14 log.45743349._049247.job.log.tgz.1
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas      7852 Jul 27 16:15 heartbeat.json
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 16:15 boinc_mmap_file
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas        27 Jul 27 16:15 wrapper_checkpoint.txt
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas       744 Jul 27 16:15 pilotlog.txt
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas        95 Jul 27 16:15 pilot_heartbeat.json
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas    470662 Jul 27 16:15 log.45743349._049247.job.log.1
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas       357 Jul 27 16:15 output.list
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas       620 Jul 27 16:15 runtime_log
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas    839680 Jul 27 16:15 result.tar.gz
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas       658 Jul 27 16:15 xWnKDmVjG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBQVLDmn2RhPn.diag
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 16:15 runtime_log.err
[2025-07-27 16:15:38] -rw-r--r-- 1 boincer umatlas     21698 Jul 27 16:15 stderr.txt
[2025-07-27 16:15:38] HITS file was successfully produced:
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas 207750203 Jul 27 16:14 shared/HITS.pool.root.1
[2025-07-27 16:15:38]  *** Contents of shared directory: ***
[2025-07-27 16:15:38] total 427096
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas 228187181 Jul 27 14:52 ATLAS.root_0
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 14:52 start_atlas.sh
[2025-07-27 16:15:38] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 14:52 input.tar.gz
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas 207750203 Jul 27 16:14 HITS.pool.root.1
[2025-07-27 16:15:38] -rw------- 1 boincer umatlas    839680 Jul 27 16:15 result.tar.gz
16:15:39 (31598): run_atlas exited; CPU time 52884.091240
16:15:39 (31598): called boinc_finish(0)

</stderr_txt>
]]>

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