Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:21 (2915944): wrapper (7.7.26015): starting
14:50:21 (2915944): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 14:50:21] Arguments: --nthreads 10
[2025-07-27 14:50:21] Threads: 10
[2025-07-27 14:50:21] Checking for CVMFS
[2025-07-27 14:50:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:50:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:50:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:50:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:50:22] 2.13.1.0 128731 5492 115600 148821 0 105 17877155 39288832 4574 16776704 0 5520813 99.713 6767239 39564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:50:22] CVMFS is ok
[2025-07-27 14:50:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:50:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:50:22] Further information can be found at the LHC@home message board.
[2025-07-27 14:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:50:22] Checking for apptainer binary...
[2025-07-27 14:50:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:50:22] Running /usr/bin/apptainer --version
[2025-07-27 14:50:22] apptainer version 1.4.1-1.el9
[2025-07-27 14:50:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:50:22] c-210-25.aglt2.org
[2025-07-27 14:50:22] apptainer works
[2025-07-27 14:50:22] Set ATHENA_PROC_NUMBER=10
[2025-07-27 14:50:22] Set ATHENA_CORE_NUMBER=10
[2025-07-27 14:50:22] Starting ATLAS job with PandaID=6747412259
[2025-07-27 14:50:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:27:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:27:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:27:36]  replicas=None
[2025-07-27 16:27:36]  scope=mc23_13p6TeV
[2025-07-27 16:27:36]  status=None
[2025-07-27 16:27:36]  status_code=0
[2025-07-27 16:27:36]  storage_token=
[2025-07-27 16:27:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747412259/log.45743349._049361.job.log.tgz.1
[2025-07-27 16:27:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/72/log.45743349._049361.job.log.tgz.1
[2025-07-27 16:27:36]  workdir=None
[2025-07-27 16:27:36] ]
[2025-07-27 16:27:36] 2025-07-27 20:26:54,843 | INFO     | transferring file log.45743349._049361.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747412259/log.45743349._049361.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:27:36] 2025-07-27 20:26:54,844 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747412259/log.45743349._049361.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049361.job
[2025-07-27 16:27:36] 2025-07-27 20:26:54,863 | INFO     | adding to output.list: log.45743349._049361.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/72/log.45743349._049361.job.log.tg
[2025-07-27 16:27:36] 2025-07-27 20:26:54,864 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:27:36] 2025-07-27 20:26:54,864 | INFO     | summary of transferred files:
[2025-07-27 16:27:36] 2025-07-27 20:26:54,864 | INFO     |  -- lfn=log.45743349._049361.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:27:36] 2025-07-27 20:26:54,864 | INFO     | stage-out finished correctly
[2025-07-27 16:27:36] 2025-07-27 20:26:55,079 | WARNING  | process 2925977 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 16:27:36] 2025-07-27 20:26:55,079 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412259/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:27:36] 2025-07-27 20:26:55,230 | INFO     | number of running child processes to parent process 2925977: 1
[2025-07-27 16:27:36] 2025-07-27 20:26:55,231 | INFO     | maximum number of monitored processes: 6
[2025-07-27 16:27:36] 2025-07-27 20:26:56,229 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:27:36] 2025-07-27 20:26:57,739 | INFO     | monitor loop #430: job 0:6747412259 is in state 'finished'
[2025-07-27 16:27:36] 2025-07-27 20:26:57,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:27:36] 2025-07-27 20:26:58,849 | INFO     | job 6747412259 has state=finished
[2025-07-27 16:27:36] 2025-07-27 20:26:58,849 | INFO     | preparing for final server update for job 6747412259 in state='finished'
[2025-07-27 16:27:36] 2025-07-27 20:26:58,850 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:27:36] 2025-07-27 20:26:58,851 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:27:36] 2025-07-27 20:26:58,851 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:27:36] 2025-07-27 20:26:58,851 | INFO     | job 6747412259 has finished - writing final server update
[2025-07-27 16:27:36] 2025-07-27 20:26:58,851 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:27:36] 2025-07-27 20:26:58,853 | INFO     | executing command: lscpu
[2025-07-27 16:27:36] 2025-07-27 20:26:58,888 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:27:36] 2025-07-27 20:27:00,242 | INFO     | monitor loop #431: job 0:6747412259 is in state 'finished'
[2025-07-27 16:27:36] 2025-07-27 20:27:00,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:27:36] 2025-07-27 20:27:02,744 | INFO     | monitor loop #432: job 0:6747412259 is in state 'finished'
[2025-07-27 16:27:36] 2025-07-27 20:27:02,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,097 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:27:36] 2025-07-27 20:27:03,102 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.144050000001
[2025-07-27 16:27:36] 2025-07-27 20:27:03,106 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412259/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,107 | INFO     | extracted standard info from prmon json
[2025-07-27 16:27:36] 2025-07-27 20:27:03,107 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:27:36] 2025-07-27 20:27:03,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:27:36] 2025-07-27 20:27:03,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:27:36] 2025-07-27 20:27:03,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:27:36] 2025-07-27 20:27:03,109 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:27:36] 2025-07-27 20:27:03,109 | INFO     | sum of square deviations: 211285822.0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | sum of deviations: -14239896059.000002
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | mean x: 1753645215.5
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | mean y: 2736644.2954545454
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | -- intersect: 118192047014.03082
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | intersect: 118192047014.03082
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | chi2: 0.1447138955284989
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | -- intersect: 118192047014.03082
[2025-07-27 16:27:36] 2025-07-27 20:27:03,110 | INFO     | current memory leak: -67.40 B/s (using 88 data points, chi2=0.14)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | could have reported an average CPU frequency of 2603 MHz (7 samples)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | ..............................
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . Timing measurements:
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . get job = 0 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . initial setup = 2 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . payload setup = 6 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . stage-in = 0 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . payload execution = 5757 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . stage-out = 0 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | . log creation = 0 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,111 | INFO     | ..............................
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | 
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | job summary report
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | --------------------------------------------------
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | PanDA job id: 6747412259
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | task id: 45743349
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | errors: (none)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | pilot state: finished 
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | transexitcode: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | exeerrorcode: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | exeerrordiag: 
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | exitcode: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | exitmsg: OK
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | cpuconsumptiontime: 52673 s
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | nevents: 400
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | neventsw: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | pid: 2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | pgrp: 2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | corecount: 10
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | event service: False
[2025-07-27 16:27:36] 2025-07-27 20:27:03,626 | INFO     | sizes: {0: 2397475, 1: 2397475, 4: 2397765, 11: 2397793, 5766: 2424549, 5767: 2424548, 5768: 2433730, 5769: 2433786, 5776: 2433980}
[2025-07-27 16:27:36] 2025-07-27 20:27:03,627 | INFO     | --------------------------------------------------
[2025-07-27 16:27:36] 2025-07-27 20:27:03,627 | INFO     | 
[2025-07-27 16:27:36] 2025-07-27 20:27:03,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:27:36] 2025-07-27 20:27:03,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:27:36] 2025-07-27 20:27:03,646 | INFO     | job 6747412259 has completed (purged errors)
[2025-07-27 16:27:36] 2025-07-27 20:27:03,646 | INFO     | overall cleanup function is called
[2025-07-27 16:27:36] 2025-07-27 20:27:04,652 | INFO     | --- collectZombieJob: --- 10, [2925977]
[2025-07-27 16:27:36] 2025-07-27 20:27:04,653 | INFO     | zombie collector waiting for pid 2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:04,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:27:36] 2025-07-27 20:27:04,653 | INFO     | collected zombie processes
[2025-07-27 16:27:36] 2025-07-27 20:27:04,653 | INFO     | will attempt to kill all subprocesses of pid=2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:04,830 | INFO     | process IDs to be killed: [2925977] (in reverse order)
[2025-07-27 16:27:36] 2025-07-27 20:27:04,902 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:27:36] 2025-07-27 20:27:04,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:27:36] 2025-07-27 20:27:04,912 | INFO     | did not find any defunct processes belonging to 2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:04,919 | INFO     | did not find any defunct processes belonging to 2925977
[2025-07-27 16:27:36] 2025-07-27 20:27:04,920 | INFO     | ready for new job
[2025-07-27 16:27:36] 2025-07-27 20:27:04,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:27:36] 2025-07-27 20:27:04,922 | INFO     | ***************************************
[2025-07-27 16:27:36] 2025-07-27 20:27:04,922 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:27:36] 2025-07-27 20:27:04,922 | INFO     | ***************************************
[2025-07-27 16:27:36] 2025-07-27 20:27:04,922 | INFO     | 
[2025-07-27 16:27:36] 2025-07-27 20:27:04,924 | INFO     | architecture information:
[2025-07-27 16:27:36] 2025-07-27 20:27:04,924 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:27:36] 2025-07-27 20:27:04,936 | INFO     | cat /etc/os-release:
[2025-07-27 16:27:36] NAME="CentOS Linux"
[2025-07-27 16:27:36] VERSION="7 (Core)"
[2025-07-27 16:27:36] ID="centos"
[2025-07-27 16:27:36] ID_LIKE="rhel fedora"
[2025-07-27 16:27:36] VERSION_ID="7"
[2025-07-27 16:27:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:27:36] ANSI_COLOR="0;31"
[2025-07-27 16:27:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:27:36] HOME_URL="https://www.centos.org/"
[2025-07-27 16:27:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:27:36] 
[2025-07-27 16:27:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:27:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:27:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:27:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:27:36] 
[2025-07-27 16:27:36] 2025-07-27 20:27:04,937 | INFO     | ***************************************
[2025-07-27 16:27:36] 2025-07-27 20:27:05,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:27:36] 2025-07-27 20:27:05,459 | INFO     | sufficient remaining disk space (53838086144 B)
[2025-07-27 16:27:36] 2025-07-27 20:27:05,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:27:36] 2025-07-27 20:27:05,459 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:27:36] 2025-07-27 20:27:05,460 | INFO     | update_server=False
[2025-07-27 16:27:36] 2025-07-27 20:27:05,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:27:36] 2025-07-27 20:27:05,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:27:36] 2025-07-27 20:27:05,626 | INFO     | all data control threads have been joined
[2025-07-27 16:27:36] 2025-07-27 20:27:06,086 | INFO     | all job control threads have been joined
[2025-07-27 16:27:36] 2025-07-27 20:27:06,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:27:36] 2025-07-27 20:27:06,253 | INFO     | aborting loop
[2025-07-27 16:27:36] 2025-07-27 20:27:06,465 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:06,632 | INFO     | [data] control thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:06,675 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:06,762 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:06,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:27:36] 2025-07-27 20:27:06,839 | INFO     | all payload control threads have been joined
[2025-07-27 16:27:36] 2025-07-27 20:27:06,959 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,092 | INFO     | [job] control thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,258 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,276 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,465 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,637 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,807 | INFO     | [job] validate thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,844 | INFO     | [payload] control thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:07,901 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:08,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:27:36] 2025-07-27 20:27:09,192 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:10,821 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:27:36] 2025-07-27 20:27:11,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862449272640)>', '<ExcThread(monitor, started 139861944149760)>']
[2025-07-27 16:27:36] 2025-07-27 20:27:16,766 | INFO     | all workflow threads have been joined
[2025-07-27 16:27:36] 2025-07-27 20:27:16,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:27:36] 2025-07-27 20:27:16,768 | INFO     | traces error code: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:16,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:27:36] 2025-07-27 20:27:35,812 | INFO     | PID=2919529 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:27:36] 2025-07-27 20:27:35,813 | INFO     | .. there are 6 such processes running
[2025-07-27 16:27:36] 2025-07-27 20:27:35,813 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:27:36] 2025-07-27 20:27:35,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:27:36] 2025-07-27 20:27:35,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:27:36] 2025-07-27 20:27:35,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:27:36] 2025-07-27 20:27:35,814 | INFO     | [monitor] control thread has ended
[2025-07-27 16:27:36] 2025-07-27 20:27:35,928 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:27:36] 2025-07-27 20:27:35,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:27:36] 2025-07-27 20:27:35,934 [wrapper] pilotpid: 2919529
[2025-07-27 16:27:36] 2025-07-27 20:27:35,937 [wrapper] Pilot exit status: 0
[2025-07-27 16:27:36] 2025-07-27 20:27:35,949 [wrapper] pandaids: 6747412259
[2025-07-27 16:27:36] 2025-07-27 20:27:36,000 [wrapper] cleanup supervisor_pilot 3008587 2919530
[2025-07-27 16:27:36] 2025-07-27 20:27:36,004 [wrapper] Test setup, not cleaning
[2025-07-27 16:27:36] 2025-07-27 20:27:36,007 [wrapper] apfmon messages muted
[2025-07-27 16:27:36] 2025-07-27 20:27:36,011 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:27:36] 2025-07-27 20:27:36,014 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:27:36]  *** Error codes and diagnostics ***
[2025-07-27 16:27:36]     "exeErrorCode": 0,
[2025-07-27 16:27:36]     "exeErrorDiag": "",
[2025-07-27 16:27:36]     "pilotErrorCode": 0,
[2025-07-27 16:27:36]     "pilotErrorDiag": "",
[2025-07-27 16:27:36]  *** Listing of results directory ***
[2025-07-27 16:27:36] total 425916
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:42 queuedata.json
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 16:27:36] -rwx------. 1 boincer umatlas     36292 Jul 27 09:42 runpilot2-wrapper.sh
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:27:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:50 run_atlas
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:50 job.xml
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas 229045497 Jul 27 14:50 EVNT.45743347._002725.pool.root.1
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:50 start_atlas.sh
[2025-07-27 16:27:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:50 shared
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 14:50 input.tar.gz
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:50 boinc_lockfile
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 14:50 pandaJob.out
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas    980125 Jul 27 14:50 agis_schedconf.cvmfs.json
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:50 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:27:36] drwx------. 4 boincer umatlas      4096 Jul 27 14:50 pilot3
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas 201390187 Jul 27 16:26 HITS.45743349._049361.pool.root.1
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:26 boinc_task_state.xml
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas      1029 Jul 27 16:26 memory_monitor_summary.json
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas    351595 Jul 27 16:26 log.45743349._049361.job.log.tgz.1
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas      7814 Jul 27 16:27 heartbeat.json
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas      6656 Jul 27 16:27 init_data.xml
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:27 boinc_mmap_file
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:27 wrapper_checkpoint.txt
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas        95 Jul 27 16:27 pilot_heartbeat.json
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas       822 Jul 27 16:27 pilotlog.txt
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas    565052 Jul 27 16:27 log.45743349._049361.job.log.1
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas       357 Jul 27 16:27 output.list
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:27 runtime_log
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas    931840 Jul 27 16:27 result.tar.gz
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 16:27 runtime_log.err
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas       653 Jul 27 16:27 IwgMDmNpG07n9Rq4apOajLDm4fhM0noT9bVof3QYDmRd2KDmPlE8Pm.diag
[2025-07-27 16:27:36] -rw-r--r--. 1 boincer umatlas     21982 Jul 27 16:27 stderr.txt
[2025-07-27 16:27:36] HITS file was successfully produced:
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas 201390187 Jul 27 16:26 shared/HITS.pool.root.1
[2025-07-27 16:27:36]  *** Contents of shared directory: ***
[2025-07-27 16:27:36] total 421816
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas 229045497 Jul 27 14:50 ATLAS.root_0
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:50 start_atlas.sh
[2025-07-27 16:27:36] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 14:50 input.tar.gz
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas 201390187 Jul 27 16:26 HITS.pool.root.1
[2025-07-27 16:27:36] -rw-------. 1 boincer umatlas    931840 Jul 27 16:27 result.tar.gz
16:27:37 (2915944): run_atlas exited; CPU time 52753.854072
16:27:37 (2915944): called boinc_finish(0)

</stderr_txt>
]]>

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