Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:44 (2414326): wrapper (7.7.26015): starting
14:47:44 (2414326): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 14:47:44] Arguments: --nthreads 10
[2025-07-27 14:47:44] Threads: 10
[2025-07-27 14:47:44] Checking for CVMFS
[2025-07-27 14:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:47:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:47:45] 2.13.1.0 128577 5475 133668 148821 3 65 14541876 39288832 6561 16776704 0 3753629 99.804 5409049 47083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:47:45] CVMFS is ok
[2025-07-27 14:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:47:45] Further information can be found at the LHC@home message board.
[2025-07-27 14:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:47:45] Checking for apptainer binary...
[2025-07-27 14:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:47:45] Running /usr/bin/apptainer --version
[2025-07-27 14:47:45] apptainer version 1.4.1-1.el9
[2025-07-27 14:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:47:45] c-210-30.aglt2.org
[2025-07-27 14:47:45] apptainer works
[2025-07-27 14:47:45] Set ATHENA_PROC_NUMBER=10
[2025-07-27 14:47:45] Set ATHENA_CORE_NUMBER=10
[2025-07-27 14:47:45] Starting ATLAS job with PandaID=6747412206
[2025-07-27 14:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:47:43]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:47:43] 2025-07-27 20:47:08,240 | INFO     | executing command: lscpu
[2025-07-27 16:47:43] 2025-07-27 20:47:08,267 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:47:43] 2025-07-27 20:47:10,583 | INFO     | monitor loop #523: job 0:6747412206 is in state 'finished'
[2025-07-27 16:47:43] 2025-07-27 20:47:10,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:47:43] 2025-07-27 20:47:11,132 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2583.6085499999995
[2025-07-27 16:47:43] 2025-07-27 20:47:11,137 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412206/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,138 | INFO     | extracted standard info from prmon json
[2025-07-27 16:47:43] 2025-07-27 20:47:11,138 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:47:43] 2025-07-27 20:47:11,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:47:43] 2025-07-27 20:47:11,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:47:43] 2025-07-27 20:47:11,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:47:43] 2025-07-27 20:47:11,140 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:47:43] 2025-07-27 20:47:11,141 | INFO     | sum of square deviations: 496601366.99145323
[2025-07-27 16:47:43] 2025-07-27 20:47:11,141 | INFO     | sum of deviations: 2921779086.820509
[2025-07-27 16:47:43] 2025-07-27 20:47:11,141 | INFO     | mean x: 1753645652.008547
[2025-07-27 16:47:43] 2025-07-27 20:47:11,142 | INFO     | mean y: 2663768.1794871795
[2025-07-27 16:47:43] 2025-07-27 20:47:11,142 | INFO     | -- intersect: -10314998510.467585
[2025-07-27 16:47:43] 2025-07-27 20:47:11,142 | INFO     | intersect: -10314998510.467585
[2025-07-27 16:47:43] 2025-07-27 20:47:11,142 | INFO     | chi2: 1.6006198129064715
[2025-07-27 16:47:43] 2025-07-27 20:47:11,142 | INFO     | sum of square deviations: 435614481.99107105
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | sum of deviations: 2571369579.8571434
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | mean x: 1753645499.5089285
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | mean y: 2662923.1428571427
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | -- intersect: -10348854020.646612
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | intersect: -10348854020.646612
[2025-07-27 16:47:43] 2025-07-27 20:47:11,143 | INFO     | chi2: 1.5994485679237032
[2025-07-27 16:47:43] 2025-07-27 20:47:11,144 | INFO     | current chi2=1.5994485679237032 (change=0.07317446487442461 %)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,144 | INFO     | right removable region: 111
[2025-07-27 16:47:43] 2025-07-27 20:47:11,144 | INFO     | sum of square deviations: 435613871.99107105
[2025-07-27 16:47:43] 2025-07-27 20:47:11,144 | INFO     | sum of deviations: -14396278711.499994
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | mean x: 1753645804.5089285
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | mean y: 2706154.5
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | -- intersect: 57957641445.1756
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | intersect: 57957641445.1756
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | chi2: 0.20446220008713664
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | current chi2=0.20446220008713664 (change=87.22606090225351 %)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,145 | INFO     | sum of square deviations: 379835776.9906545
[2025-07-27 16:47:43] 2025-07-27 20:47:11,146 | INFO     | sum of deviations: -13883534323.73832
[2025-07-27 16:47:43] 2025-07-27 20:47:11,146 | INFO     | mean x: 1753645957.0093458
[2025-07-27 16:47:43] 2025-07-27 20:47:11,146 | INFO     | mean y: 2704586.738317757
[2025-07-27 16:47:43] 2025-07-27 20:47:11,146 | INFO     | -- intersect: 64100942063.78149
[2025-07-27 16:47:43] 2025-07-27 20:47:11,146 | INFO     | intersect: 64100942063.78149
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | chi2: 0.1833503020585157
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | current chi2=0.1833503020585157 (change=10.325575103673721 %)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | left removable region: 20
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | sum of square deviations: 233644884.98901114
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | sum of deviations: -4061922534.263732
[2025-07-27 16:47:43] 2025-07-27 20:47:11,147 | INFO     | mean x: 1753646079.010989
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | mean y: 2672663.263736264
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | -- intersect: 30489856347.139343
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | intersect: 30489856347.139343
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | chi2: 0.10903579385599342
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | -- intersect: 30489856347.139343
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | current memory leak: -17.39 B/s (using 91 data points, chi2=0.11)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,148 | INFO     | could have reported an average CPU frequency of 2592 MHz (7 samples)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | ..............................
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . Timing measurements:
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . get job = 0 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . initial setup = 3 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . payload setup = 9 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . stage-in = 0 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . payload execution = 7112 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . stage-out = 0 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | . log creation = 0 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,149 | INFO     | ..............................
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | 
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | job summary report
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | --------------------------------------------------
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | PanDA job id: 6747412206
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | task id: 45743349
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | errors: (none)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | pilot state: finished 
[2025-07-27 16:47:43] 2025-07-27 20:47:11,537 | INFO     | transexitcode: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | exeerrorcode: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | exeerrordiag: 
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | exitcode: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | exitmsg: OK
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | cpuconsumptiontime: 54682 s
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | nevents: 400
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | neventsw: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | pid: 2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | pgrp: 2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | corecount: 10
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | event service: False
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 12: 2397793, 7125: 2425016, 7127: 2434014, 7129: 2434198, 7133: 2434392}
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | --------------------------------------------------
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | 
[2025-07-27 16:47:43] 2025-07-27 20:47:11,538 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | job 6747412206 has completed (purged errors)
[2025-07-27 16:47:43] 2025-07-27 20:47:11,553 | INFO     | overall cleanup function is called
[2025-07-27 16:47:43] 2025-07-27 20:47:12,560 | INFO     | --- collectZombieJob: --- 10, [2424333]
[2025-07-27 16:47:43] 2025-07-27 20:47:12,560 | INFO     | zombie collector waiting for pid 2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:12,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:47:43] 2025-07-27 20:47:12,560 | INFO     | collected zombie processes
[2025-07-27 16:47:43] 2025-07-27 20:47:12,560 | INFO     | will attempt to kill all subprocesses of pid=2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:12,723 | INFO     | process IDs to be killed: [2424333] (in reverse order)
[2025-07-27 16:47:43] 2025-07-27 20:47:12,777 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:47:43] 2025-07-27 20:47:12,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:47:43] 2025-07-27 20:47:12,783 | INFO     | did not find any defunct processes belonging to 2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:12,788 | INFO     | did not find any defunct processes belonging to 2424333
[2025-07-27 16:47:43] 2025-07-27 20:47:12,788 | INFO     | ready for new job
[2025-07-27 16:47:43] 2025-07-27 20:47:12,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:47:43] 2025-07-27 20:47:12,789 | INFO     | ***************************************
[2025-07-27 16:47:43] 2025-07-27 20:47:12,789 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:47:43] 2025-07-27 20:47:12,789 | INFO     | ***************************************
[2025-07-27 16:47:43] 2025-07-27 20:47:12,789 | INFO     | 
[2025-07-27 16:47:43] 2025-07-27 20:47:12,791 | INFO     | architecture information:
[2025-07-27 16:47:43] 2025-07-27 20:47:12,791 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:47:43] 2025-07-27 20:47:12,800 | INFO     | cat /etc/os-release:
[2025-07-27 16:47:43] NAME="CentOS Linux"
[2025-07-27 16:47:43] VERSION="7 (Core)"
[2025-07-27 16:47:43] ID="centos"
[2025-07-27 16:47:43] ID_LIKE="rhel fedora"
[2025-07-27 16:47:43] VERSION_ID="7"
[2025-07-27 16:47:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:47:43] ANSI_COLOR="0;31"
[2025-07-27 16:47:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:47:43] HOME_URL="https://www.centos.org/"
[2025-07-27 16:47:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:47:43] 
[2025-07-27 16:47:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:47:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:47:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:47:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:47:43] 
[2025-07-27 16:47:43] 2025-07-27 20:47:12,801 | INFO     | ***************************************
[2025-07-27 16:47:43] 2025-07-27 20:47:13,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | INFO     | sufficient remaining disk space (53837037568 B)
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | INFO     | update_server=False
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:47:43] 2025-07-27 20:47:13,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:47:43] 2025-07-27 20:47:13,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:47:43] 2025-07-27 20:47:14,025 | INFO     | all data control threads have been joined
[2025-07-27 16:47:43] 2025-07-27 20:47:14,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:47:43] 2025-07-27 20:47:14,091 | INFO     | aborting loop
[2025-07-27 16:47:43] 2025-07-27 20:47:14,319 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:14,362 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:14,383 | INFO     | all payload control threads have been joined
[2025-07-27 16:47:43] 2025-07-27 20:47:14,594 | INFO     | all job control threads have been joined
[2025-07-27 16:47:43] 2025-07-27 20:47:14,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:14,788 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,030 | INFO     | [data] control thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,096 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,320 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,388 | INFO     | [payload] control thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,411 | INFO     | [job] validate thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,580 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,599 | INFO     | [job] control thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,716 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,774 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:15,776 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:16,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:47:43] 2025-07-27 20:47:17,242 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:17,564 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:47:43] 2025-07-27 20:47:19,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678515820352)>', '<ExcThread(monitor, started 139678015538944)>']
[2025-07-27 16:47:43] 2025-07-27 20:47:24,466 | INFO     | all workflow threads have been joined
[2025-07-27 16:47:43] 2025-07-27 20:47:24,466 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:47:43] 2025-07-27 20:47:24,466 | INFO     | traces error code: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:24,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:47:43] 2025-07-27 20:47:43,630 | INFO     | PID=2417910 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:47:43] 2025-07-27 20:47:43,631 | INFO     | .. there are 6 such processes running
[2025-07-27 16:47:43] 2025-07-27 20:47:43,631 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:47:43] 2025-07-27 20:47:43,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:47:43] 2025-07-27 20:47:43,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:47:43] 2025-07-27 20:47:43,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:47:43] 2025-07-27 20:47:43,632 | INFO     | [monitor] control thread has ended
[2025-07-27 16:47:43] 2025-07-27 20:47:43,741 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:47:43] 2025-07-27 20:47:43,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:47:43] 2025-07-27 20:47:43,745 [wrapper] pilotpid: 2417910
[2025-07-27 16:47:43] 2025-07-27 20:47:43,747 [wrapper] Pilot exit status: 0
[2025-07-27 16:47:43] 2025-07-27 20:47:43,757 [wrapper] pandaids: 6747412206
[2025-07-27 16:47:43] 2025-07-27 20:47:43,809 [wrapper] cleanup supervisor_pilot 2562621 2417911
[2025-07-27 16:47:43] 2025-07-27 20:47:43,813 [wrapper] Test setup, not cleaning
[2025-07-27 16:47:43] 2025-07-27 20:47:43,817 [wrapper] apfmon messages muted
[2025-07-27 16:47:43] 2025-07-27 20:47:43,821 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:47:43] 2025-07-27 20:47:43,825 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:47:43]  *** Error codes and diagnostics ***
[2025-07-27 16:47:43]     "exeErrorCode": 0,
[2025-07-27 16:47:43]     "exeErrorDiag": "",
[2025-07-27 16:47:43]     "pilotErrorCode": 0,
[2025-07-27 16:47:43]     "pilotErrorDiag": "",
[2025-07-27 16:47:43]  *** Listing of results directory ***
[2025-07-27 16:47:43] total 426988
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 16:47:43] -rwx------. 1 boincer umatlas     36292 Jul 27 09:41 runpilot2-wrapper.sh
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:41 queuedata.json
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:47:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:47 run_atlas
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:47 job.xml
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas 229670499 Jul 27 14:47 EVNT.45743347._002723.pool.root.1
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:47 start_atlas.sh
[2025-07-27 16:47:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:47 shared
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 14:47 input.tar.gz
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:47 boinc_lockfile
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 14:47 pandaJob.out
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas    980125 Jul 27 14:47 agis_schedconf.cvmfs.json
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:47:43] drwx------. 4 boincer umatlas      4096 Jul 27 14:48 pilot3
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas      6656 Jul 27 16:37 init_data.xml
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas 201615198 Jul 27 16:46 HITS.45743349._049308.pool.root.1
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:46 boinc_task_state.xml
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas      1048 Jul 27 16:47 memory_monitor_summary.json
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas    359442 Jul 27 16:47 log.45743349._049308.job.log.tgz.1
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas      7828 Jul 27 16:47 heartbeat.json
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:47 boinc_mmap_file
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:47 wrapper_checkpoint.txt
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas        95 Jul 27 16:47 pilot_heartbeat.json
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas       822 Jul 27 16:47 pilotlog.txt
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas    678292 Jul 27 16:47 log.45743349._049308.job.log.1
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas       357 Jul 27 16:47 output.list
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:47 runtime_log
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas   1054720 Jul 27 16:47 result.tar.gz
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas       654 Jul 27 16:47 sUULDmOoG07n9Rq4apOajLDm4fhM0noT9bVof3QYDmec2KDmxu15Nm.diag
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 16:47 runtime_log.err
[2025-07-27 16:47:43] -rw-r--r--. 1 boincer umatlas     21293 Jul 27 16:47 stderr.txt
[2025-07-27 16:47:43] HITS file was successfully produced:
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas 201615198 Jul 27 16:46 shared/HITS.pool.root.1
[2025-07-27 16:47:43]  *** Contents of shared directory: ***
[2025-07-27 16:47:43] total 422768
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas 229670499 Jul 27 14:47 ATLAS.root_0
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:47 start_atlas.sh
[2025-07-27 16:47:43] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 14:47 input.tar.gz
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas 201615198 Jul 27 16:46 HITS.pool.root.1
[2025-07-27 16:47:43] -rw-------. 1 boincer umatlas   1054720 Jul 27 16:47 result.tar.gz
16:47:45 (2414326): run_atlas exited; CPU time 54762.791271
16:47:45 (2414326): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN