Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:07:49 (415895): wrapper (7.7.26015): starting
16:07:49 (415895): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 16:07:49] Arguments: --nthreads 12
[2025-07-27 16:07:49] Threads: 12
[2025-07-27 16:07:49] Checking for CVMFS
[2025-07-27 16:07:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:07:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:07:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:07:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:07:50] 2.13.0.0 1190652 18824 342288 148822 1 333 20658378 32935936 6596 16776704 0 33921558 99.724 58079767 29268 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 16:07:50] CVMFS is ok
[2025-07-27 16:07:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:07:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:07:50] Further information can be found at the LHC@home message board.
[2025-07-27 16:07:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:07:50] Checking for apptainer binary...
[2025-07-27 16:07:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:07:50] Running /usr/bin/apptainer --version
[2025-07-27 16:07:50] apptainer version 1.4.1-1.el9
[2025-07-27 16:07:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:07:50] c6-1-26-3.aglt2.org
[2025-07-27 16:07:50] apptainer works
[2025-07-27 16:07:50] Set ATHENA_PROC_NUMBER=12
[2025-07-27 16:07:50] Set ATHENA_CORE_NUMBER=12
[2025-07-27 16:07:50] Starting ATLAS job with PandaID=6747412157
[2025-07-27 16:07:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:28:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:28:08]  replicas=None
[2025-07-27 17:28:08]  scope=mc23_13p6TeV
[2025-07-27 17:28:08]  status=None
[2025-07-27 17:28:08]  status_code=0
[2025-07-27 17:28:08]  storage_token=
[2025-07-27 17:28:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747412157/log.45743349._049259.job.log.tgz.1
[2025-07-27 17:28:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/e7/log.45743349._049259.job.log.tgz.1
[2025-07-27 17:28:08]  workdir=None
[2025-07-27 17:28:08] ]
[2025-07-27 17:28:08] 2025-07-27 21:27:28,147 | INFO     | transferring file log.45743349._049259.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747412157/log.45743349._049259.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 17:28:08] 2025-07-27 21:27:28,147 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747412157/log.45743349._049259.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049259.job
[2025-07-27 17:28:08] 2025-07-27 21:27:28,167 | INFO     | adding to output.list: log.45743349._049259.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/e7/log.45743349._049259.job.log.tg
[2025-07-27 17:28:08] 2025-07-27 21:27:28,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 17:28:08] 2025-07-27 21:27:28,168 | INFO     | summary of transferred files:
[2025-07-27 17:28:08] 2025-07-27 21:27:28,168 | INFO     |  -- lfn=log.45743349._049259.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 17:28:08] 2025-07-27 21:27:28,168 | INFO     | stage-out finished correctly
[2025-07-27 17:28:08] 2025-07-27 21:27:28,249 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 17:28:08] 2025-07-27 21:27:29,010 | WARNING  | process 428391 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 17:28:08] 2025-07-27 21:27:29,010 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412157/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:28:08] 2025-07-27 21:27:29,291 | INFO     | number of running child processes to parent process 428391: 1
[2025-07-27 17:28:08] 2025-07-27 21:27:29,291 | INFO     | maximum number of monitored processes: 6
[2025-07-27 17:28:08] 2025-07-27 21:27:31,210 | INFO     | job 6747412157 has state=finished
[2025-07-27 17:28:08] 2025-07-27 21:27:31,210 | INFO     | preparing for final server update for job 6747412157 in state='finished'
[2025-07-27 17:28:08] 2025-07-27 21:27:31,211 | INFO     | this job has now completed (state=finished)
[2025-07-27 17:28:08] 2025-07-27 21:27:31,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 17:28:08] 2025-07-27 21:27:31,211 | INFO     | log transfer has been attempted: DONE
[2025-07-27 17:28:08] 2025-07-27 21:27:31,212 | INFO     | job 6747412157 has finished - writing final server update
[2025-07-27 17:28:08] 2025-07-27 21:27:31,212 | INFO     | total number of processed events: 400 (read)
[2025-07-27 17:28:08] 2025-07-27 21:27:31,214 | INFO     | executing command: lscpu
[2025-07-27 17:28:08] 2025-07-27 21:27:31,266 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 17:28:08] 2025-07-27 21:27:31,794 | INFO     | monitor loop #352: job 0:6747412157 is in state 'finished'
[2025-07-27 17:28:08] 2025-07-27 21:27:31,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:28:08] 2025-07-27 21:27:34,297 | INFO     | monitor loop #353: job 0:6747412157 is in state 'finished'
[2025-07-27 17:28:08] 2025-07-27 21:27:34,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:28:08] 2025-07-27 21:27:35,689 | INFO     | PID=420809 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:28:08] 2025-07-27 21:27:35,689 | INFO     | .. there are 10 such processes running
[2025-07-27 17:28:08] 2025-07-27 21:27:36,031 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 17:28:08] 2025-07-27 21:27:36,034 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2609.5687142857146
[2025-07-27 17:28:08] 2025-07-27 21:27:36,042 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412157/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,043 | INFO     | extracted standard info from prmon json
[2025-07-27 17:28:08] 2025-07-27 21:27:36,043 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:28:08] 2025-07-27 21:27:36,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:28:08] 2025-07-27 21:27:36,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:28:08] 2025-07-27 21:27:36,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:28:08] 2025-07-27 21:27:36,045 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:28:08] 2025-07-27 21:27:36,045 | INFO     | sum of square deviations: 110960220.0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | sum of deviations: -792503704.0000002
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | mean x: 1753649354.0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | mean y: 2463824.8450704226
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | -- intersect: 12527435463.890196
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | intersect: 12527435463.890196
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | chi2: 0.04156126697665608
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | -- intersect: 12527435463.890196
[2025-07-27 17:28:08] 2025-07-27 21:27:36,046 | INFO     | current memory leak: -7.14 B/s (using 71 data points, chi2=0.04)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | could have reported an average CPU frequency of 2609 MHz (6 samples)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | ..............................
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . Timing measurements:
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . get job = 0 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . initial setup = 2 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . payload setup = 8 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . stage-in = 0 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . payload execution = 4734 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . stage-out = 0 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | . log creation = 0 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,047 | INFO     | ..............................
[2025-07-27 17:28:08] 2025-07-27 21:27:36,129 | INFO     | 
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | job summary report
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | --------------------------------------------------
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | PanDA job id: 6747412157
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | task id: 45743349
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | errors: (none)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | pilot state: finished 
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | transexitcode: 0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | exeerrorcode: 0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | exeerrordiag: 
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | exitcode: 0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,130 | INFO     | exitmsg: OK
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | cpuconsumptiontime: 50759 s
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | nevents: 400
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | neventsw: 0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | pid: 428391
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | pgrp: 428391
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | corecount: 12
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | event service: False
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | sizes: {0: 2397361, 1: 2397503, 6: 2397765, 11: 2397793, 4747: 2423919, 4748: 2433101, 4756: 2433239}
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | --------------------------------------------------
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | 
[2025-07-27 17:28:08] 2025-07-27 21:27:36,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 17:28:08] 2025-07-27 21:27:36,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:28:08] 2025-07-27 21:27:36,152 | INFO     | job 6747412157 has completed (purged errors)
[2025-07-27 17:28:08] 2025-07-27 21:27:36,152 | INFO     | overall cleanup function is called
[2025-07-27 17:28:08] 2025-07-27 21:27:37,160 | INFO     | --- collectZombieJob: --- 10, [428391]
[2025-07-27 17:28:08] 2025-07-27 21:27:37,160 | INFO     | zombie collector waiting for pid 428391
[2025-07-27 17:28:08] 2025-07-27 21:27:37,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:28:08] 2025-07-27 21:27:37,160 | INFO     | collected zombie processes
[2025-07-27 17:28:08] 2025-07-27 21:27:37,160 | INFO     | will attempt to kill all subprocesses of pid=428391
[2025-07-27 17:28:08] 2025-07-27 21:27:37,470 | INFO     | process IDs to be killed: [428391] (in reverse order)
[2025-07-27 17:28:08] 2025-07-27 21:27:37,577 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:28:08] 2025-07-27 21:27:37,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:28:08] 2025-07-27 21:27:37,588 | INFO     | did not find any defunct processes belonging to 428391
[2025-07-27 17:28:08] 2025-07-27 21:27:37,601 | INFO     | did not find any defunct processes belonging to 428391
[2025-07-27 17:28:08] 2025-07-27 21:27:37,602 | INFO     | ready for new job
[2025-07-27 17:28:08] 2025-07-27 21:27:37,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:28:08] 2025-07-27 21:27:37,604 | INFO     | ***************************************
[2025-07-27 17:28:08] 2025-07-27 21:27:37,605 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:28:08] 2025-07-27 21:27:37,605 | INFO     | ***************************************
[2025-07-27 17:28:08] 2025-07-27 21:27:37,605 | INFO     | 
[2025-07-27 17:28:08] 2025-07-27 21:27:37,621 | INFO     | architecture information:
[2025-07-27 17:28:08] 2025-07-27 21:27:37,621 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:28:08] 2025-07-27 21:27:37,637 | INFO     | cat /etc/os-release:
[2025-07-27 17:28:08] NAME="CentOS Linux"
[2025-07-27 17:28:08] VERSION="7 (Core)"
[2025-07-27 17:28:08] ID="centos"
[2025-07-27 17:28:08] ID_LIKE="rhel fedora"
[2025-07-27 17:28:08] VERSION_ID="7"
[2025-07-27 17:28:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:28:08] ANSI_COLOR="0;31"
[2025-07-27 17:28:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:28:08] HOME_URL="https://www.centos.org/"
[2025-07-27 17:28:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:28:08] 
[2025-07-27 17:28:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:28:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:28:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:28:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:28:08] 
[2025-07-27 17:28:08] 2025-07-27 21:27:37,638 | INFO     | ***************************************
[2025-07-27 17:28:08] 2025-07-27 21:27:38,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 17:28:08] 2025-07-27 21:27:38,160 | INFO     | sufficient remaining disk space (76278661120 B)
[2025-07-27 17:28:08] 2025-07-27 21:27:38,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:28:08] 2025-07-27 21:27:38,160 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:28:08] 2025-07-27 21:27:38,161 | INFO     | update_server=False
[2025-07-27 17:28:08] 2025-07-27 21:27:38,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:28:08] 2025-07-27 21:27:38,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:28:08] 2025-07-27 21:27:38,161 | INFO     | aborting loop
[2025-07-27 17:28:08] 2025-07-27 21:27:38,618 | INFO     | all data control threads have been joined
[2025-07-27 17:28:08] 2025-07-27 21:27:38,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:28:08] 2025-07-27 21:27:38,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:28:08] 2025-07-27 21:27:39,021 | INFO     | all payload control threads have been joined
[2025-07-27 17:28:08] 2025-07-27 21:27:39,166 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,166 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,232 | INFO     | all job control threads have been joined
[2025-07-27 17:28:08] 2025-07-27 21:27:39,393 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,598 | INFO     | [job] validate thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,623 | INFO     | [data] control thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,650 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,651 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:39,828 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:40,026 | INFO     | [payload] control thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:40,190 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:40,237 | INFO     | [job] control thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:40,607 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:40,769 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:41,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:28:08] 2025-07-27 21:27:42,144 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:42,842 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:48,250 | INFO     | job.realtimelogging is not enabled
[2025-07-27 17:28:08] 2025-07-27 21:27:49,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:28:08] 2025-07-27 21:27:49,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961386559296)>', '<ExcThread(monitor, started 139960862615296)>']
[2025-07-27 17:28:08] 2025-07-27 21:27:54,808 | INFO     | all workflow threads have been joined
[2025-07-27 17:28:08] 2025-07-27 21:27:54,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:28:08] 2025-07-27 21:27:54,808 | INFO     | traces error code: 0
[2025-07-27 17:28:08] 2025-07-27 21:27:54,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:28:08] 2025-07-27 21:28:08,043 | INFO     | PID=420809 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 17:28:08] 2025-07-27 21:28:08,045 | INFO     | .. there are 10 such processes running
[2025-07-27 17:28:08] 2025-07-27 21:28:08,046 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:28:08] 2025-07-27 21:28:08,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:28:08] 2025-07-27 21:28:08,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:28:08] 2025-07-27 21:28:08,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:28:08] 2025-07-27 21:28:08,047 | INFO     | [monitor] control thread has ended
[2025-07-27 17:28:08] 2025-07-27 21:28:08,272 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:28:08] 2025-07-27 21:28:08,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:28:08] 2025-07-27 21:28:08,279 [wrapper] pilotpid: 420809
[2025-07-27 17:28:08] 2025-07-27 21:28:08,282 [wrapper] Pilot exit status: 0
[2025-07-27 17:28:08] 2025-07-27 21:28:08,296 [wrapper] pandaids: 6747412157
[2025-07-27 17:28:08] 2025-07-27 21:28:08,361 [wrapper] cleanup supervisor_pilot  709092 420810
[2025-07-27 17:28:08] 2025-07-27 21:28:08,365 [wrapper] Test setup, not cleaning
[2025-07-27 17:28:08] 2025-07-27 21:28:08,368 [wrapper] apfmon messages muted
[2025-07-27 17:28:08] 2025-07-27 21:28:08,372 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:28:08] 2025-07-27 21:28:08,374 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:28:08]  *** Error codes and diagnostics ***
[2025-07-27 17:28:08]     "exeErrorCode": 0,
[2025-07-27 17:28:08]     "exeErrorDiag": "",
[2025-07-27 17:28:08]     "pilotErrorCode": 0,
[2025-07-27 17:28:08]     "pilotErrorDiag": "",
[2025-07-27 17:28:08]  *** Listing of results directory ***
[2025-07-27 17:28:08] total 430012
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:35 queuedata.json
[2025-07-27 17:28:08] -rwx------. 1 boincer umatlas     36292 Jul 27 09:36 runpilot2-wrapper.sh
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas       100 Jul 27 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:28:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 16:07 run_atlas
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas       105 Jul 27 16:07 job.xml
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas 228187181 Jul 27 16:07 EVNT.45743347._002721.pool.root.1
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:07 start_atlas.sh
[2025-07-27 17:28:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 16:07 shared
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 16:07 input.tar.gz
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas         0 Jul 27 16:07 boinc_lockfile
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 16:07 pandaJob.out
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas    980125 Jul 27 16:08 agis_schedconf.cvmfs.json
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas   1593052 Jul 27 16:08 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:28:08] drwx------. 4 boincer umatlas      4096 Jul 27 16:08 pilot3
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 17:20 init_data.xml
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas 206593901 Jul 27 17:26 HITS.45743349._049259.pool.root.1
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas       529 Jul 27 17:26 boinc_task_state.xml
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas      1030 Jul 27 17:27 memory_monitor_summary.json
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas    368477 Jul 27 17:27 log.45743349._049259.job.log.tgz.1
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas      7814 Jul 27 17:27 heartbeat.json
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:27 boinc_mmap_file
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas        27 Jul 27 17:27 wrapper_checkpoint.txt
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas        95 Jul 27 17:28 pilot_heartbeat.json
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas       822 Jul 27 17:28 pilotlog.txt
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas    472571 Jul 27 17:28 log.45743349._049259.job.log.1
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas       357 Jul 27 17:28 output.list
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:28 runtime_log
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas    860160 Jul 27 17:28 result.tar.gz
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 17:28 runtime_log.err
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas       655 Jul 27 17:28 rcrNDmfjG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNQVLDmtfEdEo.diag
[2025-07-27 17:28:08] -rw-r--r--. 1 boincer umatlas     21951 Jul 27 17:28 stderr.txt
[2025-07-27 17:28:08] HITS file was successfully produced:
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas 206593901 Jul 27 17:26 shared/HITS.pool.root.1
[2025-07-27 17:28:08]  *** Contents of shared directory: ***
[2025-07-27 17:28:08] total 425984
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas 228187181 Jul 27 16:07 ATLAS.root_0
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 16:07 start_atlas.sh
[2025-07-27 17:28:08] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 16:07 input.tar.gz
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas 206593901 Jul 27 17:26 HITS.pool.root.1
[2025-07-27 17:28:08] -rw-------. 1 boincer umatlas    860160 Jul 27 17:28 result.tar.gz
17:28:09 (415895): run_atlas exited; CPU time 50824.183522
17:28:09 (415895): called boinc_finish(0)

</stderr_txt>
]]>

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