Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:51:30 (1694704): wrapper (7.7.26015): starting
14:51:30 (1694704): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 14:51:30] Arguments: --nthreads 10
[2025-07-27 14:51:30] Threads: 10
[2025-07-27 14:51:30] Checking for CVMFS
[2025-07-27 14:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:51:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:51:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:51:31] 2.12.6.0 1588522 18764 436208 148821 3 322 20710990 32935936 23400 16776704 1 101895965 99.629 109971349 19824 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 14:51:31] CVMFS is ok
[2025-07-27 14:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:51:31] Further information can be found at the LHC@home message board.
[2025-07-27 14:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:51:31] Checking for apptainer binary...
[2025-07-27 14:51:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:51:31] Running /usr/bin/apptainer --version
[2025-07-27 14:51:31] apptainer version 1.4.1-1.el9
[2025-07-27 14:51:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:51:31] c-3-40.aglt2.org
[2025-07-27 14:51:31] apptainer works
[2025-07-27 14:51:31] Set ATHENA_PROC_NUMBER=10
[2025-07-27 14:51:31] Set ATHENA_CORE_NUMBER=10
[2025-07-27 14:51:31] Starting ATLAS job with PandaID=6747412163
[2025-07-27 14:51:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:39:48]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:39:48] 2025-07-27 20:39:16,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:39:48] 2025-07-27 20:39:16,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:39:48] 2025-07-27 20:39:16,633 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:39:48] 2025-07-27 20:39:16,633 | INFO     | sum of square deviations: 358923756.9904774
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | sum of deviations: 1997053132.104765
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | mean x: 1753645519.0095239
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | mean y: 2251947.8952380954
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | -- intersect: -9755038307.016392
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | intersect: -9755038307.016392
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | chi2: 1.734284296051624
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | sum of square deviations: 310048726.9899992
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | sum of deviations: 2021421712.9200006
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | mean x: 1753645366.51
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | mean y: 2252013.08
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | -- intersect: -11430972870.759655
[2025-07-27 16:39:48] 2025-07-27 20:39:16,634 | INFO     | intersect: -11430972870.759655
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | chi2: 1.7358138482282488
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | current chi2=1.7358138482282488 (change=-0.08819500817178766 %)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | right removable region: 99
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | sum of square deviations: 310048116.9899992
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | sum of deviations: -13597627589.350006
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | mean x: 1753645671.51
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | mean y: 2299779.85
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | -- intersect: 76911074444.77644
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | intersect: 76911074444.77644
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | chi2: 0.1506219048320899
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | current chi2=0.1506219048320899 (change=91.31503957136643 %)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,635 | INFO     | sum of square deviations: 265823726.98947364
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | sum of deviations: -8835645747.778948
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | mean x: 1753645824.0105264
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | mean y: 2283273.7789473683
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | -- intersect: 58291260873.74498
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | intersect: 58291260873.74498
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | chi2: 0.11171007346389235
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | current chi2=0.11171007346389235 (change=25.834111852174246 %)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | sum of square deviations: 226018024.4888887
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | sum of deviations: -5422433861.3555565
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | mean x: 1753645976.511111
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | mean y: 2270267.355555556
[2025-07-27 16:39:48] 2025-07-27 20:39:16,636 | INFO     | -- intersect: 42074265832.16615
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | intersect: 42074265832.16615
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | chi2: 0.08413620558795297
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | current chi2=0.08413620558795297 (change=24.683421128401623 %)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | left removable region: 30
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | sum of square deviations: 101843770.0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | sum of deviations: 452624331.0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | mean x: 1753646251.0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | mean y: 2241923.8985507246
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | -- intersect: -7791489211.24632
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | intersect: -7791489211.24632
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | chi2: 0.014987531677531127
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | -- intersect: -7791489211.24632
[2025-07-27 16:39:48] 2025-07-27 20:39:16,637 | INFO     | current memory leak: 4.44 B/s (using 69 data points, chi2=0.01)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | could have reported an average CPU frequency of 2685 MHz (7 samples)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | ..............................
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | . Timing measurements:
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | . get job = 0 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | . initial setup = 3 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,638 | INFO     | . payload setup = 12 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,639 | INFO     | . stage-in = 0 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,639 | INFO     | . payload execution = 6404 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,639 | INFO     | . stage-out = 0 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,639 | INFO     | . log creation = 0 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,639 | INFO     | ..............................
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | 
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | job summary report
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | --------------------------------------------------
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | PanDA job id: 6747412163
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | task id: 45743349
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | errors: (none)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,714 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | pilot state: finished 
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | transexitcode: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | exeerrorcode: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | exeerrordiag: 
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | exitcode: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | exitmsg: OK
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | cpuconsumptiontime: 47595 s
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | nevents: 400
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | neventsw: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | pid: 1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | pgrp: 1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | corecount: 10
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | event service: False
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | sizes: {0: 2397247, 1: 2397502, 8: 2397764, 12: 2397792, 6419: 2425043, 6421: 2434041, 6422: 2434225, 6430: 2434419}
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | --------------------------------------------------
[2025-07-27 16:39:48] 2025-07-27 20:39:16,715 | INFO     | 
[2025-07-27 16:39:48] 2025-07-27 20:39:16,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:39:48] 2025-07-27 20:39:16,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | job 6747412163 has completed (purged errors)
[2025-07-27 16:39:48] 2025-07-27 20:39:16,740 | INFO     | overall cleanup function is called
[2025-07-27 16:39:48] 2025-07-27 20:39:17,748 | INFO     | --- collectZombieJob: --- 10, [1707265]
[2025-07-27 16:39:48] 2025-07-27 20:39:17,748 | INFO     | zombie collector waiting for pid 1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:17,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:39:48] 2025-07-27 20:39:17,749 | INFO     | collected zombie processes
[2025-07-27 16:39:48] 2025-07-27 20:39:17,749 | INFO     | will attempt to kill all subprocesses of pid=1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:18,144 | INFO     | process IDs to be killed: [1707265] (in reverse order)
[2025-07-27 16:39:48] 2025-07-27 20:39:18,270 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:39:48] 2025-07-27 20:39:18,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:39:48] 2025-07-27 20:39:18,289 | INFO     | did not find any defunct processes belonging to 1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:18,306 | INFO     | did not find any defunct processes belonging to 1707265
[2025-07-27 16:39:48] 2025-07-27 20:39:18,307 | INFO     | ready for new job
[2025-07-27 16:39:48] 2025-07-27 20:39:18,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:39:48] 2025-07-27 20:39:18,309 | INFO     | ***************************************
[2025-07-27 16:39:48] 2025-07-27 20:39:18,309 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:39:48] 2025-07-27 20:39:18,309 | INFO     | ***************************************
[2025-07-27 16:39:48] 2025-07-27 20:39:18,309 | INFO     | 
[2025-07-27 16:39:48] 2025-07-27 20:39:18,327 | INFO     | architecture information:
[2025-07-27 16:39:48] 2025-07-27 20:39:18,327 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:39:48] 2025-07-27 20:39:18,342 | INFO     | cat /etc/os-release:
[2025-07-27 16:39:48] NAME="CentOS Linux"
[2025-07-27 16:39:48] VERSION="7 (Core)"
[2025-07-27 16:39:48] ID="centos"
[2025-07-27 16:39:48] ID_LIKE="rhel fedora"
[2025-07-27 16:39:48] VERSION_ID="7"
[2025-07-27 16:39:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:39:48] ANSI_COLOR="0;31"
[2025-07-27 16:39:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:39:48] HOME_URL="https://www.centos.org/"
[2025-07-27 16:39:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:39:48] 
[2025-07-27 16:39:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:39:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:39:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:39:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:39:48] 
[2025-07-27 16:39:48] 2025-07-27 20:39:18,343 | INFO     | ***************************************
[2025-07-27 16:39:48] 2025-07-27 20:39:18,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:39:48] 2025-07-27 20:39:18,863 | INFO     | sufficient remaining disk space (75836162048 B)
[2025-07-27 16:39:48] 2025-07-27 20:39:18,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:39:48] 2025-07-27 20:39:18,864 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:39:48] 2025-07-27 20:39:18,864 | INFO     | update_server=False
[2025-07-27 16:39:48] 2025-07-27 20:39:18,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:39:48] 2025-07-27 20:39:18,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:39:48] 2025-07-27 20:39:18,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:39:48] 2025-07-27 20:39:18,865 | INFO     | aborting loop
[2025-07-27 16:39:48] 2025-07-27 20:39:19,192 | INFO     | all payload control threads have been joined
[2025-07-27 16:39:48] 2025-07-27 20:39:19,194 | INFO     | all data control threads have been joined
[2025-07-27 16:39:48] 2025-07-27 20:39:19,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:39:48] 2025-07-27 20:39:19,869 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:19,870 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:19,891 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:19,956 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,197 | INFO     | [payload] control thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,199 | INFO     | [data] control thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,356 | INFO     | [job] validate thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,393 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,495 | INFO     | all job control threads have been joined
[2025-07-27 16:39:48] 2025-07-27 20:39:20,525 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,619 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:20,870 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:21,362 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:21,500 | INFO     | [job] control thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:21,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:39:48] 2025-07-27 20:39:22,728 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:23,780 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:29,568 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:39:48] 2025-07-27 20:39:30,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:39:48] 2025-07-27 20:39:31,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010628257600)>', '<ExcThread(monitor, started 140010128914176)>']
[2025-07-27 16:39:48] 2025-07-27 20:39:36,167 | INFO     | all workflow threads have been joined
[2025-07-27 16:39:48] 2025-07-27 20:39:36,167 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:39:48] 2025-07-27 20:39:36,168 | INFO     | traces error code: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:36,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:39:48] 2025-07-27 20:39:48,410 | INFO     | PID=1699172 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:39:48] 2025-07-27 20:39:48,410 | INFO     | .. there are 35 such processes running
[2025-07-27 16:39:48] 2025-07-27 20:39:48,411 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:39:48] 2025-07-27 20:39:48,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:39:48] 2025-07-27 20:39:48,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:39:48] 2025-07-27 20:39:48,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:39:48] 2025-07-27 20:39:48,411 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 16:39:48] 2025-07-27 20:39:48,412 | INFO     | [monitor] control thread has ended
[2025-07-27 16:39:48] 2025-07-27 20:39:48,614 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:39:48] 2025-07-27 20:39:48,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:39:48] 2025-07-27 20:39:48,623 [wrapper] pilotpid: 1699172
[2025-07-27 16:39:48] 2025-07-27 20:39:48,627 [wrapper] Pilot exit status: 0
[2025-07-27 16:39:48] 2025-07-27 20:39:48,639 [wrapper] pandaids: 6747412163
[2025-07-27 16:39:48] 2025-07-27 20:39:48,731 [wrapper] cleanup supervisor_pilot 2178732 1699173
[2025-07-27 16:39:48] 2025-07-27 20:39:48,734 [wrapper] Test setup, not cleaning
[2025-07-27 16:39:48] 2025-07-27 20:39:48,736 [wrapper] apfmon messages muted
[2025-07-27 16:39:48] 2025-07-27 20:39:48,740 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:39:48] 2025-07-27 20:39:48,743 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:39:48]  *** Error codes and diagnostics ***
[2025-07-27 16:39:48]     "exeErrorCode": 0,
[2025-07-27 16:39:48]     "exeErrorDiag": "",
[2025-07-27 16:39:48]     "pilotErrorCode": 0,
[2025-07-27 16:39:48]     "pilotErrorDiag": "",
[2025-07-27 16:39:48]  *** Listing of results directory ***
[2025-07-27 16:39:48] total 434292
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:32 queuedata.json
[2025-07-27 16:39:48] -rwx------. 1 boincer umatlas     36292 Jul 27 09:33 runpilot2-wrapper.sh
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:39:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:51 run_atlas
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:51 job.xml
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas 228187181 Jul 27 14:51 EVNT.45743347._002721.pool.root.1
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:51 start_atlas.sh
[2025-07-27 16:39:48] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:51 shared
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:51 input.tar.gz
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:51 boinc_lockfile
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 14:51 pandaJob.out
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas    980125 Jul 27 14:51 agis_schedconf.cvmfs.json
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:39:48] drwx------. 4 boincer umatlas      4096 Jul 27 14:51 pilot3
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 16:28 init_data.xml
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas 210722255 Jul 27 16:38 HITS.45743349._049265.pool.root.1
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:38 boinc_task_state.xml
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas      1040 Jul 27 16:39 memory_monitor_summary.json
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas    363326 Jul 27 16:39 log.45743349._049265.job.log.tgz.1
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas      7819 Jul 27 16:39 heartbeat.json
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:39 boinc_mmap_file
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:39 wrapper_checkpoint.txt
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas        95 Jul 27 16:39 pilot_heartbeat.json
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas       893 Jul 27 16:39 pilotlog.txt
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas    603906 Jul 27 16:39 log.45743349._049265.job.log.1
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas       357 Jul 27 16:39 output.list
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:39 runtime_log
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas    983040 Jul 27 16:39 result.tar.gz
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas       651 Jul 27 16:39 WoeMDmPgG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWPVLDmvLSFQn.diag
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas      8652 Jul 27 16:39 runtime_log.err
[2025-07-27 16:39:48] -rw-r--r--. 1 boincer umatlas     20930 Jul 27 16:39 stderr.txt
[2025-07-27 16:39:48] HITS file was successfully produced:
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas 210722255 Jul 27 16:38 shared/HITS.pool.root.1
[2025-07-27 16:39:48]  *** Contents of shared directory: ***
[2025-07-27 16:39:48] total 430140
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas 228187181 Jul 27 14:51 ATLAS.root_0
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:51 start_atlas.sh
[2025-07-27 16:39:48] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:51 input.tar.gz
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas 210722255 Jul 27 16:38 HITS.pool.root.1
[2025-07-27 16:39:48] -rw-------. 1 boincer umatlas    983040 Jul 27 16:39 result.tar.gz
16:39:50 (1694704): run_atlas exited; CPU time 47851.109388
16:39:50 (1694704): called boinc_finish(0)

</stderr_txt>
]]>

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