Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:06:20 (3050673): wrapper (7.7.26015): starting
15:06:20 (3050673): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 15:06:20] Arguments: --nthreads 8
[2025-07-27 15:06:20] Threads: 8
[2025-07-27 15:06:20] Checking for CVMFS
[2025-07-27 15:06:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:06:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:06:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:06:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:06:20] 2.13.0.0 1483043 18778 294468 148821 3 744 27795726 40960000 19309 16776704 0 83908584 99.683 97203272 18903 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 15:06:20] CVMFS is ok
[2025-07-27 15:06:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:06:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:06:20] Further information can be found at the LHC@home message board.
[2025-07-27 15:06:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:06:20] Checking for apptainer binary...
[2025-07-27 15:06:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 15:06:20] Running /usr/bin/apptainer --version
[2025-07-27 15:06:20] apptainer version 1.4.1-1.el9
[2025-07-27 15:06:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:06:20] c7-4-30.aglt2.org
[2025-07-27 15:06:20] apptainer works
[2025-07-27 15:06:20] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:06:20] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:06:20] Starting ATLAS job with PandaID=6747412029
[2025-07-27 15:06:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:30:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:30:20]  status=None
[2025-07-27 16:30:20]  status_code=0
[2025-07-27 16:30:20]  storage_token=
[2025-07-27 16:30:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747412029/log.45743349._049162.job.log.tgz.1
[2025-07-27 16:30:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/0a/log.45743349._049162.job.log.tgz.1
[2025-07-27 16:30:20]  workdir=None
[2025-07-27 16:30:20] ]
[2025-07-27 16:30:20] 2025-07-27 20:29:35,726 | INFO     | transferring file log.45743349._049162.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747412029/log.45743349._049162.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:30:20] 2025-07-27 20:29:35,726 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747412029/log.45743349._049162.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._049162.job
[2025-07-27 16:30:20] 2025-07-27 20:29:35,749 | INFO     | adding to output.list: log.45743349._049162.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/0a/log.45743349._049162.job.log.tg
[2025-07-27 16:30:20] 2025-07-27 20:29:35,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:30:20] 2025-07-27 20:29:35,749 | INFO     | summary of transferred files:
[2025-07-27 16:30:20] 2025-07-27 20:29:35,750 | INFO     |  -- lfn=log.45743349._049162.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:30:20] 2025-07-27 20:29:35,750 | INFO     | stage-out finished correctly
[2025-07-27 16:30:20] 2025-07-27 20:29:37,049 | INFO     | monitor loop #362: job 0:6747412029 is in state 'finished'
[2025-07-27 16:30:20] 2025-07-27 20:29:37,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:30:20] 2025-07-27 20:29:38,576 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:30:20] 2025-07-27 20:29:39,552 | INFO     | monitor loop #363: job 0:6747412029 is in state 'finished'
[2025-07-27 16:30:20] 2025-07-27 20:29:39,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:30:20] 2025-07-27 20:29:41,309 | INFO     | job 6747412029 has state=finished
[2025-07-27 16:30:20] 2025-07-27 20:29:41,309 | INFO     | preparing for final server update for job 6747412029 in state='finished'
[2025-07-27 16:30:20] 2025-07-27 20:29:41,309 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:30:20] 2025-07-27 20:29:41,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:30:20] 2025-07-27 20:29:41,310 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:30:20] 2025-07-27 20:29:41,310 | INFO     | job 6747412029 has finished - writing final server update
[2025-07-27 16:30:20] 2025-07-27 20:29:41,310 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:30:20] 2025-07-27 20:29:41,311 | INFO     | executing command: lscpu
[2025-07-27 16:30:20] 2025-07-27 20:29:41,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:30:20] 2025-07-27 20:29:42,055 | INFO     | monitor loop #364: job 0:6747412029 is in state 'finished'
[2025-07-27 16:30:20] 2025-07-27 20:29:42,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:30:20] 2025-07-27 20:29:44,558 | INFO     | monitor loop #365: job 0:6747412029 is in state 'finished'
[2025-07-27 16:30:20] 2025-07-27 20:29:44,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:30:20] 2025-07-27 20:29:46,933 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:30:20] 2025-07-27 20:29:46,938 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3014.8688645833336
[2025-07-27 16:30:20] 2025-07-27 20:29:46,966 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747412029/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:30:20] 2025-07-27 20:29:46,967 | INFO     | extracted standard info from prmon json
[2025-07-27 16:30:20] 2025-07-27 20:29:46,967 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:30:20] 2025-07-27 20:29:46,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:30:20] 2025-07-27 20:29:46,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:30:20] 2025-07-27 20:29:46,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:30:20] 2025-07-27 20:29:46,969 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:30:20] 2025-07-27 20:29:46,969 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 16:30:20] 2025-07-27 20:29:46,969 | INFO     | sum of deviations: 832421615.9999999
[2025-07-27 16:30:20] 2025-07-27 20:29:46,969 | INFO     | mean x: 1753645790.0
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | mean y: 2208031.493333333
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | -- intersect: -11158717922.223635
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | intersect: -11158717922.223635
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | chi2: 0.013108818043092578
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | -- intersect: -11158717922.223635
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | current memory leak: 6.36 B/s (using 75 data points, chi2=0.01)
[2025-07-27 16:30:20] 2025-07-27 20:29:46,970 | INFO     | could have reported an average CPU frequency of 3093 MHz (6 samples)
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | ..............................
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . Timing measurements:
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . get job = 0 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . initial setup = 3 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . payload setup = 9 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . stage-in = 0 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . payload execution = 4950 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . stage-out = 0 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | . log creation = 0 s
[2025-07-27 16:30:20] 2025-07-27 20:29:46,971 | INFO     | ..............................
[2025-07-27 16:30:20] 2025-07-27 20:29:47,034 | INFO     | 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,034 | INFO     | job summary report
[2025-07-27 16:30:20] 2025-07-27 20:29:47,034 | INFO     | --------------------------------------------------
[2025-07-27 16:30:20] 2025-07-27 20:29:47,034 | INFO     | PanDA job id: 6747412029
[2025-07-27 16:30:20] 2025-07-27 20:29:47,034 | INFO     | task id: 45743349
[2025-07-27 16:30:20] 2025-07-27 20:29:47,035 | INFO     | errors: (none)
[2025-07-27 16:30:20] 2025-07-27 20:29:47,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,035 | INFO     | pilot state: finished 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,072 | INFO     | transexitcode: 0
[2025-07-27 16:30:20] 2025-07-27 20:29:47,072 | INFO     | exeerrorcode: 0
[2025-07-27 16:30:20] 2025-07-27 20:29:47,072 | INFO     | exeerrordiag: 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,072 | INFO     | exitcode: 0
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | exitmsg: OK
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | cpuconsumptiontime: 36663 s
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | nevents: 400
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | neventsw: 0
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | pid: 3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | pgrp: 3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | corecount: 8
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | event service: False
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 4963: 2423933, 4964: 2432931, 4967: 2432987, 4975: 2433309}
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | --------------------------------------------------
[2025-07-27 16:30:20] 2025-07-27 20:29:47,073 | INFO     | 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:30:20] 2025-07-27 20:29:47,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:30:20] 2025-07-27 20:29:47,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:30:20] 2025-07-27 20:29:47,107 | INFO     | job 6747412029 has completed (purged errors)
[2025-07-27 16:30:20] 2025-07-27 20:29:47,107 | INFO     | overall cleanup function is called
[2025-07-27 16:30:20] 2025-07-27 20:29:47,666 | INFO     | PID=3054281 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 16:30:20] 2025-07-27 20:29:47,667 | INFO     | .. there are 33 such processes running
[2025-07-27 16:30:20] 2025-07-27 20:29:48,116 | INFO     | --- collectZombieJob: --- 10, [3061433]
[2025-07-27 16:30:20] 2025-07-27 20:29:48,116 | INFO     | zombie collector waiting for pid 3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:48,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:30:20] 2025-07-27 20:29:48,116 | INFO     | collected zombie processes
[2025-07-27 16:30:20] 2025-07-27 20:29:48,116 | INFO     | will attempt to kill all subprocesses of pid=3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:48,562 | INFO     | process IDs to be killed: [3061433] (in reverse order)
[2025-07-27 16:30:20] 2025-07-27 20:29:48,710 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:30:20] 2025-07-27 20:29:48,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:30:20] 2025-07-27 20:29:48,729 | INFO     | did not find any defunct processes belonging to 3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:48,747 | INFO     | did not find any defunct processes belonging to 3061433
[2025-07-27 16:30:20] 2025-07-27 20:29:48,748 | INFO     | ready for new job
[2025-07-27 16:30:20] 2025-07-27 20:29:48,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:30:20] 2025-07-27 20:29:48,749 | INFO     | ***************************************
[2025-07-27 16:30:20] 2025-07-27 20:29:48,749 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:30:20] 2025-07-27 20:29:48,749 | INFO     | ***************************************
[2025-07-27 16:30:20] 2025-07-27 20:29:48,749 | INFO     | 
[2025-07-27 16:30:20] 2025-07-27 20:29:48,767 | INFO     | architecture information:
[2025-07-27 16:30:20] 2025-07-27 20:29:48,768 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:30:20] 2025-07-27 20:29:48,786 | INFO     | cat /etc/os-release:
[2025-07-27 16:30:20] NAME="CentOS Linux"
[2025-07-27 16:30:20] VERSION="7 (Core)"
[2025-07-27 16:30:20] ID="centos"
[2025-07-27 16:30:20] ID_LIKE="rhel fedora"
[2025-07-27 16:30:20] VERSION_ID="7"
[2025-07-27 16:30:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:30:20] ANSI_COLOR="0;31"
[2025-07-27 16:30:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:30:20] HOME_URL="https://www.centos.org/"
[2025-07-27 16:30:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:30:20] 
[2025-07-27 16:30:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:30:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:30:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:30:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:30:20] 
[2025-07-27 16:30:20] 2025-07-27 20:29:48,787 | INFO     | ***************************************
[2025-07-27 16:30:20] 2025-07-27 20:29:49,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:30:20] 2025-07-27 20:29:49,307 | INFO     | sufficient remaining disk space (128656080896 B)
[2025-07-27 16:30:20] 2025-07-27 20:29:49,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:30:20] 2025-07-27 20:29:49,307 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:30:20] 2025-07-27 20:29:49,307 | INFO     | update_server=False
[2025-07-27 16:30:20] 2025-07-27 20:29:49,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:30:20] 2025-07-27 20:29:49,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:30:20] 2025-07-27 20:29:49,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:30:20] 2025-07-27 20:29:49,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 16:30:20] 2025-07-27 20:29:49,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 16:30:20] 2025-07-27 20:29:49,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:30:20] 2025-07-27 20:29:49,574 | INFO     | will abort loop
[2025-07-27 16:30:20] 2025-07-27 20:29:49,792 | INFO     | all payload control threads have been joined
[2025-07-27 16:30:20] 2025-07-27 20:29:49,926 | INFO     | all data control threads have been joined
[2025-07-27 16:30:20] 2025-07-27 20:29:50,312 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,322 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,330 | INFO     | [job] validate thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,353 | INFO     | all job control threads have been joined
[2025-07-27 16:30:20] 2025-07-27 20:29:50,354 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,508 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,579 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,583 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,797 | INFO     | [payload] control thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,839 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,928 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:50,931 | INFO     | [data] control thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:51,314 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:51,358 | INFO     | [job] control thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:52,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:30:20] 2025-07-27 20:29:53,050 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:29:53,314 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:30:00,113 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:30:20] 2025-07-27 20:30:01,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:30:20] 2025-07-27 20:30:01,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140404878116672)>', '<ExcThread(monitor, started 140404074731264)>']
[2025-07-27 16:30:20] 2025-07-27 20:30:06,366 | INFO     | all workflow threads have been joined
[2025-07-27 16:30:20] 2025-07-27 20:30:06,366 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:30:20] 2025-07-27 20:30:06,366 | INFO     | traces error code: 0
[2025-07-27 16:30:20] 2025-07-27 20:30:06,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:30:20] 2025-07-27 20:30:20,351 | INFO     | PID=3054281 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:30:20] 2025-07-27 20:30:20,351 | INFO     | .. there are 33 such processes running
[2025-07-27 16:30:20] 2025-07-27 20:30:20,352 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:30:20] 2025-07-27 20:30:20,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:30:20] 2025-07-27 20:30:20,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:30:20] 2025-07-27 20:30:20,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:30:20] 2025-07-27 20:30:20,352 | INFO     | [monitor] control thread has ended
[2025-07-27 16:30:20] 2025-07-27 20:30:20,485 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:30:20] 2025-07-27 20:30:20,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:30:20] 2025-07-27 20:30:20,496 [wrapper] pilotpid: 3054281
[2025-07-27 16:30:20] 2025-07-27 20:30:20,501 [wrapper] Pilot exit status: 0
[2025-07-27 16:30:20] 2025-07-27 20:30:20,520 [wrapper] pandaids: 6747412029
[2025-07-27 16:30:20] 2025-07-27 20:30:20,638 [wrapper] cleanup supervisor_pilot 3567109 3054282
[2025-07-27 16:30:20] 2025-07-27 20:30:20,641 [wrapper] Test setup, not cleaning
[2025-07-27 16:30:20] 2025-07-27 20:30:20,646 [wrapper] apfmon messages muted
[2025-07-27 16:30:20] 2025-07-27 20:30:20,650 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:30:20] 2025-07-27 20:30:20,654 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:30:20]  *** Error codes and diagnostics ***
[2025-07-27 16:30:20]     "exeErrorCode": 0,
[2025-07-27 16:30:20]     "exeErrorDiag": "",
[2025-07-27 16:30:20]     "pilotErrorCode": 0,
[2025-07-27 16:30:20]     "pilotErrorDiag": "",
[2025-07-27 16:30:20]  *** Listing of results directory ***
[2025-07-27 16:30:20] total 439140
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:04 pilot3.tar.gz
[2025-07-27 16:30:20] -rwx------. 1 boincer umatlas     36292 Jul 27 09:27 runpilot2-wrapper.sh
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 09:27 queuedata.json
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas       100 Jul 27 15:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:30:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 15:06 run_atlas
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas       105 Jul 27 15:06 job.xml
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas 229871598 Jul 27 15:06 EVNT.45743347._002717.pool.root.1
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 15:06 input.tar.gz
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:06 start_atlas.sh
[2025-07-27 16:30:20] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 15:06 shared
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas         0 Jul 27 15:06 boinc_lockfile
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 15:06 pandaJob.out
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas    980125 Jul 27 15:06 agis_schedconf.cvmfs.json
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas   1593052 Jul 27 15:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:30:20] drwx------. 4 boincer umatlas      4096 Jul 27 15:06 pilot3
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas      6935 Jul 27 16:27 init_data.xml
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:29 boinc_task_state.xml
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas 214333580 Jul 27 16:29 HITS.45743349._049162.pool.root.1
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas      1031 Jul 27 16:29 memory_monitor_summary.json
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas    314107 Jul 27 16:29 log.45743349._049162.job.log.tgz.1
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas      7765 Jul 27 16:29 heartbeat.json
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:30 wrapper_checkpoint.txt
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:30 boinc_mmap_file
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas        95 Jul 27 16:30 pilot_heartbeat.json
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas       823 Jul 27 16:30 pilotlog.txt
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas    484933 Jul 27 16:30 log.45743349._049162.job.log.1
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas       357 Jul 27 16:30 output.list
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:30 runtime_log
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas    819200 Jul 27 16:30 result.tar.gz
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas       650 Jul 27 16:30 YpLMDmNaG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4OVLDmkmzYrm.diag
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 16:30 runtime_log.err
[2025-07-27 16:30:20] -rw-r--r--. 1 boincer umatlas     22108 Jul 27 16:30 stderr.txt
[2025-07-27 16:30:20] HITS file was successfully produced:
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas 214333580 Jul 27 16:29 shared/HITS.pool.root.1
[2025-07-27 16:30:20]  *** Contents of shared directory: ***
[2025-07-27 16:30:20] total 435152
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas 229871598 Jul 27 15:06 ATLAS.root_0
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 15:06 input.tar.gz
[2025-07-27 16:30:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 15:06 start_atlas.sh
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas 214333580 Jul 27 16:29 HITS.pool.root.1
[2025-07-27 16:30:20] -rw-------. 1 boincer umatlas    819200 Jul 27 16:30 result.tar.gz
16:30:22 (3050673): run_atlas exited; CPU time 36862.949454
16:30:22 (3050673): called boinc_finish(0)

</stderr_txt>
]]>

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