Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:27 (1467630): wrapper (7.7.26015): starting
12:27:27 (1467630): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 12:27:27] Arguments: --nthreads 12
[2025-07-28 12:27:27] Threads: 12
[2025-07-28 12:27:27] Checking for CVMFS
[2025-07-28 12:27:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:27:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:27:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:27:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:27:27] 2.13.1.0 1072336 9281 83764 148845 0 57 2289699 4097024 0 130560 0 11436905 99.988 340714 7522 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 12:27:27] CVMFS is ok
[2025-07-28 12:27:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 12:27:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 12:27:28] Further information can be found at the LHC@home message board.
[2025-07-28 12:27:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:27:28] Checking for apptainer binary...
[2025-07-28 12:27:28] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 12:27:28] apptainer is not installed, using version from CVMFS
[2025-07-28 12:27:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:27:28] pckelar2.cern.ch
[2025-07-28 12:27:28] apptainer works
[2025-07-28 12:27:28] Set ATHENA_PROC_NUMBER=12
[2025-07-28 12:27:28] Set ATHENA_CORE_NUMBER=12
[2025-07-28 12:27:28] Starting ATLAS job with PandaID=6747411588
[2025-07-28 12:27:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:16:21]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:16:21]  mtime=0
[2025-07-28 13:16:21]  protocol_id=None
[2025-07-28 13:16:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 13:16:21]  replicas=None
[2025-07-28 13:16:21]  scope=mc23_13p6TeV
[2025-07-28 13:16:21]  status=None
[2025-07-28 13:16:21]  status_code=0
[2025-07-28 13:16:21]  storage_token=
[2025-07-28 13:16:21]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747411588/log.45743349._048802.job.log.tgz.1
[2025-07-28 13:16:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/48/log.45743349._048802.job.log.tgz.1
[2025-07-28 13:16:21]  workdir=None
[2025-07-28 13:16:21] ]
[2025-07-28 13:16:21] 2025-07-28 11:15:41,964 | INFO     | transferring file log.45743349._048802.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747411588/log.45743349._048802.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 13:16:21] 2025-07-28 11:15:41,965 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747411588/log.45743349._048802.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._048802.job
[2025-07-28 13:16:21] 2025-07-28 11:15:41,977 | INFO     | adding to output.list: log.45743349._048802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/48/log.45743349._048802.job.log.tg
[2025-07-28 13:16:21] 2025-07-28 11:15:41,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 13:16:21] 2025-07-28 11:15:41,977 | INFO     | summary of transferred files:
[2025-07-28 13:16:21] 2025-07-28 11:15:41,977 | INFO     |  -- lfn=log.45743349._048802.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 13:16:21] 2025-07-28 11:15:41,978 | INFO     | stage-out finished correctly
[2025-07-28 13:16:21] 2025-07-28 11:15:43,351 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 13:16:21] 2025-07-28 11:15:43,748 | INFO     | monitor loop #225: job 0:6747411588 is in state 'finished'
[2025-07-28 13:16:21] 2025-07-28 11:15:43,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:16:21] 2025-07-28 11:15:45,023 | INFO     | job 6747411588 has state=finished
[2025-07-28 13:16:21] 2025-07-28 11:15:45,023 | INFO     | preparing for final server update for job 6747411588 in state='finished'
[2025-07-28 13:16:21] 2025-07-28 11:15:45,023 | INFO     | this job has now completed (state=finished)
[2025-07-28 13:16:21] 2025-07-28 11:15:45,024 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 13:16:21] 2025-07-28 11:15:45,024 | INFO     | log transfer has been attempted: DONE
[2025-07-28 13:16:21] 2025-07-28 11:15:45,024 | INFO     | job 6747411588 has finished - writing final server update
[2025-07-28 13:16:21] 2025-07-28 11:15:45,024 | INFO     | total number of processed events: 400 (read)
[2025-07-28 13:16:21] 2025-07-28 11:15:45,025 | INFO     | executing command: lscpu
[2025-07-28 13:16:21] 2025-07-28 11:15:45,046 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 13:16:21] 2025-07-28 11:15:46,251 | INFO     | monitor loop #226: job 0:6747411588 is in state 'finished'
[2025-07-28 13:16:21] 2025-07-28 11:15:46,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:16:21] 2025-07-28 11:15:48,754 | INFO     | monitor loop #227: job 0:6747411588 is in state 'finished'
[2025-07-28 13:16:21] 2025-07-28 11:15:48,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,060 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 13:16:21] 2025-07-28 11:15:49,062 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2609.9256
[2025-07-28 13:16:21] 2025-07-28 11:15:49,064 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747411588/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,065 | INFO     | extracted standard info from prmon json
[2025-07-28 13:16:21] 2025-07-28 11:15:49,065 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 13:16:21] 2025-07-28 11:15:49,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 13:16:21] 2025-07-28 11:15:49,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 13:16:21] 2025-07-28 11:15:49,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | fitting pss+swap vs Time
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | sum of square deviations: 19832930.0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | sum of deviations: 647697664.5
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | mean x: 1753699971.5
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | mean y: 3174000.625
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | -- intersect: -57268614674.78839
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | intersect: -57268614674.78839
[2025-07-28 13:16:21] 2025-07-28 11:15:49,066 | INFO     | chi2: 0.0013646243649750424
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | -- intersect: -57268614674.78839
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | current memory leak: 32.66 B/s (using 40 data points, chi2=0.00)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | could have reported an average CPU frequency of 2476 MHz (5 samples)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | ..............................
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . Timing measurements:
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . get job = 0 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . initial setup = 1 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . payload setup = 5 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . stage-in = 0 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . payload execution = 2862 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . stage-out = 0 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | . log creation = 0 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,067 | INFO     | ..............................
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | 
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | job summary report
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | --------------------------------------------------
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | PanDA job id: 6747411588
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | task id: 45743349
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | errors: (none)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | pilot state: finished 
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | transexitcode: 0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | exeerrorcode: 0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | exeerrordiag: 
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | exitcode: 0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | exitmsg: OK
[2025-07-28 13:16:21] 2025-07-28 11:15:49,154 | INFO     | cpuconsumptiontime: 30224 s
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | nevents: 400
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | neventsw: 0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | pid: 1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | pgrp: 1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | corecount: 12
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | event service: False
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 2872: 2423167, 2874: 2432165, 2875: 2432221, 2881: 2432575}
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | --------------------------------------------------
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | 
[2025-07-28 13:16:21] 2025-07-28 11:15:49,155 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 13:16:21] 2025-07-28 11:15:49,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | job 6747411588 has completed (purged errors)
[2025-07-28 13:16:21] 2025-07-28 11:15:49,171 | INFO     | overall cleanup function is called
[2025-07-28 13:16:21] 2025-07-28 11:15:50,177 | INFO     | --- collectZombieJob: --- 10, [1478649]
[2025-07-28 13:16:21] 2025-07-28 11:15:50,178 | INFO     | zombie collector waiting for pid 1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:50,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:16:21] 2025-07-28 11:15:50,178 | INFO     | collected zombie processes
[2025-07-28 13:16:21] 2025-07-28 11:15:50,178 | INFO     | will attempt to kill all subprocesses of pid=1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:50,259 | INFO     | process IDs to be killed: [1478649] (in reverse order)
[2025-07-28 13:16:21] 2025-07-28 11:15:50,289 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:16:21] 2025-07-28 11:15:50,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:16:21] 2025-07-28 11:15:50,291 | INFO     | did not find any defunct processes belonging to 1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:50,293 | INFO     | did not find any defunct processes belonging to 1478649
[2025-07-28 13:16:21] 2025-07-28 11:15:50,293 | INFO     | ready for new job
[2025-07-28 13:16:21] 2025-07-28 11:15:50,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:16:21] 2025-07-28 11:15:50,294 | INFO     | ***************************************
[2025-07-28 13:16:21] 2025-07-28 11:15:50,294 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:16:21] 2025-07-28 11:15:50,294 | INFO     | ***************************************
[2025-07-28 13:16:21] 2025-07-28 11:15:50,294 | INFO     | 
[2025-07-28 13:16:21] 2025-07-28 11:15:50,295 | INFO     | architecture information:
[2025-07-28 13:16:21] 2025-07-28 11:15:50,295 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:16:21] 2025-07-28 11:15:50,303 | INFO     | cat /etc/os-release:
[2025-07-28 13:16:21] NAME="CentOS Linux"
[2025-07-28 13:16:21] VERSION="7 (Core)"
[2025-07-28 13:16:21] ID="centos"
[2025-07-28 13:16:21] ID_LIKE="rhel fedora"
[2025-07-28 13:16:21] VERSION_ID="7"
[2025-07-28 13:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:16:21] ANSI_COLOR="0;31"
[2025-07-28 13:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:16:21] HOME_URL="https://www.centos.org/"
[2025-07-28 13:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:16:21] 
[2025-07-28 13:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:16:21] 
[2025-07-28 13:16:21] 2025-07-28 11:15:50,304 | INFO     | ***************************************
[2025-07-28 13:16:21] 2025-07-28 11:15:50,807 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | INFO     | sufficient remaining disk space (234690183168 B)
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | INFO     | update_server=False
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:16:21] 2025-07-28 11:15:50,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:16:21] 2025-07-28 11:15:50,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:16:21] 2025-07-28 11:15:51,257 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 13:16:21] 2025-07-28 11:15:51,258 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 13:16:21] 2025-07-28 11:15:51,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:16:21] 2025-07-28 11:15:51,258 | INFO     | will abort loop
[2025-07-28 13:16:21] 2025-07-28 11:15:51,413 | INFO     | all job control threads have been joined
[2025-07-28 13:16:21] 2025-07-28 11:15:51,669 | INFO     | all data control threads have been joined
[2025-07-28 13:16:21] 2025-07-28 11:15:51,825 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:51,825 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:51,826 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:51,870 | INFO     | all payload control threads have been joined
[2025-07-28 13:16:21] 2025-07-28 11:15:52,044 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,211 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,263 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,419 | INFO     | [job] control thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,674 | INFO     | [data] control thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,815 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,825 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:52,875 | INFO     | [payload] control thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:53,180 | INFO     | [job] validate thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:53,293 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:53,309 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:15:53,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:16:21] 2025-07-28 11:15:57,910 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:16:01,137 | INFO     | job.realtimelogging is not enabled
[2025-07-28 13:16:21] 2025-07-28 11:16:02,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:16:21] 2025-07-28 11:16:02,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980900316992)>', '<ExcThread(monitor, started 139980198360832)>']
[2025-07-28 13:16:21] 2025-07-28 11:16:07,942 | INFO     | all workflow threads have been joined
[2025-07-28 13:16:21] 2025-07-28 11:16:07,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:16:21] 2025-07-28 11:16:07,942 | INFO     | traces error code: 0
[2025-07-28 13:16:21] 2025-07-28 11:16:07,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:16:21] 2025-07-28 11:16:21,128 | INFO     | PID=1471396 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 13:16:21] 2025-07-28 11:16:21,129 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:16:21] 2025-07-28 11:16:21,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:16:21] 2025-07-28 11:16:21,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:16:21] 2025-07-28 11:16:21,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:16:21] 2025-07-28 11:16:21,129 | INFO     | [monitor] control thread has ended
[2025-07-28 13:16:21] 2025-07-28 11:16:21,193 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:16:21] 2025-07-28 11:16:21,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:16:21] 2025-07-28 11:16:21,197 [wrapper] pilotpid: 1471396
[2025-07-28 13:16:21] 2025-07-28 11:16:21,199 [wrapper] Pilot exit status: 0
[2025-07-28 13:16:21] 2025-07-28 11:16:21,207 [wrapper] pandaids: 6747411588
[2025-07-28 13:16:21] 2025-07-28 11:16:21,227 [wrapper] cleanup supervisor_pilot 1490750 1471397
[2025-07-28 13:16:21] 2025-07-28 11:16:21,229 [wrapper] Test setup, not cleaning
[2025-07-28 13:16:21] 2025-07-28 11:16:21,231 [wrapper] apfmon messages muted
[2025-07-28 13:16:21] 2025-07-28 11:16:21,233 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:16:21] 2025-07-28 11:16:21,235 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:16:21]  *** Error codes and diagnostics ***
[2025-07-28 13:16:21]     "exeErrorCode": 0,
[2025-07-28 13:16:21]     "exeErrorDiag": "",
[2025-07-28 13:16:21]     "pilotErrorCode": 0,
[2025-07-28 13:16:21]     "pilotErrorDiag": "",
[2025-07-28 13:16:21]  *** Listing of results directory ***
[2025-07-28 13:16:21] total 430440
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc    530466 Jul 27 15:04 pilot3.tar.gz
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc      5112 Jul 27 15:09 queuedata.json
[2025-07-28 13:16:21] -rwx------ 1 boinc boinc     36292 Jul 27 15:11 runpilot2-wrapper.sh
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc       100 Jul 28 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:16:21] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 12:27 run_atlas
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc       105 Jul 28 12:27 job.xml
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:27 start_atlas.sh
[2025-07-28 13:16:21] drwxrwx--x 2 boinc boinc        68 Jul 28 12:27 shared
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc    542895 Jul 28 12:27 input.tar.gz
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc      6471 Jul 28 12:27 init_data.xml
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc 228435923 Jul 28 12:27 EVNT.45743347._002703.pool.root.1
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:27 boinc_lockfile
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc      2563 Jul 28 12:27 pandaJob.out
[2025-07-28 13:16:21] -rw------- 1 boinc boinc    978460 Jul 28 12:27 agis_schedconf.cvmfs.json
[2025-07-28 13:16:21] -rw------- 1 boinc boinc   1593052 Jul 28 12:27 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:16:21] drwx------ 4 boinc boinc      4096 Jul 28 12:27 pilot3
[2025-07-28 13:16:21] -rw------- 1 boinc boinc 207187588 Jul 28 13:15 HITS.45743349._048802.pool.root.1
[2025-07-28 13:16:21] -rw------- 1 boinc boinc      1015 Jul 28 13:15 memory_monitor_summary.json
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc       530 Jul 28 13:15 boinc_task_state.xml
[2025-07-28 13:16:21] -rw------- 1 boinc boinc    341090 Jul 28 13:15 log.45743349._048802.job.log.tgz.1
[2025-07-28 13:16:21] -rw------- 1 boinc boinc      7793 Jul 28 13:15 heartbeat.json
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc      8192 Jul 28 13:16 boinc_mmap_file
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc        27 Jul 28 13:16 wrapper_checkpoint.txt
[2025-07-28 13:16:21] -rw------- 1 boinc boinc        95 Jul 28 13:16 pilot_heartbeat.json
[2025-07-28 13:16:21] -rw------- 1 boinc boinc       747 Jul 28 13:16 pilotlog.txt
[2025-07-28 13:16:21] -rw------- 1 boinc boinc    302089 Jul 28 13:16 log.45743349._048802.job.log.1
[2025-07-28 13:16:21] -rw------- 1 boinc boinc       357 Jul 28 13:16 output.list
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc       620 Jul 28 13:16 runtime_log
[2025-07-28 13:16:21] -rw------- 1 boinc boinc    665600 Jul 28 13:16 result.tar.gz
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc      8684 Jul 28 13:16 runtime_log.err
[2025-07-28 13:16:21] -rw------- 1 boinc boinc       653 Jul 28 13:16 rlcNDmNLG07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4KVLDmdavCFo.diag
[2025-07-28 13:16:21] -rw-r--r-- 1 boinc boinc     21802 Jul 28 13:16 stderr.txt
[2025-07-28 13:16:21] HITS file was successfully produced:
[2025-07-28 13:16:21] -rw------- 1 boinc boinc 207187588 Jul 28 13:15 shared/HITS.pool.root.1
[2025-07-28 13:16:21]  *** Contents of shared directory: ***
[2025-07-28 13:16:21] total 426616
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:27 start_atlas.sh
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc    542895 Jul 28 12:27 input.tar.gz
[2025-07-28 13:16:21] -rw-r--r-- 2 boinc boinc 228435923 Jul 28 12:27 ATLAS.root_0
[2025-07-28 13:16:21] -rw------- 1 boinc boinc 207187588 Jul 28 13:15 HITS.pool.root.1
[2025-07-28 13:16:21] -rw------- 1 boinc boinc    665600 Jul 28 13:16 result.tar.gz
13:16:22 (1467630): run_atlas exited; CPU time 30238.816224
13:16:22 (1467630): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN