Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:45 (2558879): wrapper (7.7.26015): starting
11:29:45 (2558879): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:29:45] Arguments: --nthreads 8
[2025-07-27 11:29:45] Threads: 8
[2025-07-27 11:29:45] Checking for CVMFS
[2025-07-27 11:29:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:29:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:29:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:29:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:29:46] 2.11.3.0 1807141 109988 259772 148821 0 235 37518107 45568001 8302 130560 0 875670114 99.809 533034271 19010 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 11:29:46] CVMFS is ok
[2025-07-27 11:29:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:29:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:29:46] Further information can be found at the LHC@home message board.
[2025-07-27 11:29:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:29:46] Checking for apptainer binary...
[2025-07-27 11:29:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:29:46] Running /usr/bin/apptainer --version
[2025-07-27 11:29:46] apptainer version 1.3.3-1.el9
[2025-07-27 11:29:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:29:46] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0010.triumf.lcg
[2025-07-27 11:29:46] apptainer works
[2025-07-27 11:29:46] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:29:46] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:29:46] Starting ATLAS job with PandaID=6747412006
[2025-07-27 11:29:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:34:59]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | wrong length of table data, x=[1753641088.0], y=[1485.0] (must be same and length>=4)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . Timing measurements:
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . get job = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . initial setup = 6 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload setup = 13 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . stage-in = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload execution = 61 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . stage-out = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . log creation = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747412006/pilotlog.txt
[2025-07-27 11:34:59] 2025-07-27 18:34:26,250 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 11:34:59] - Log from pilotlog.txt -
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6747412006/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | extracted standard info from prmon json
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | wrong length of table data, x=[1753641088.0], y=[1485.0] (must be same and length>=4)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . Timing measurements:
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . get job = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . initial setup = 6 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload setup = 13 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . stage-in = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload execution = 61 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . stage-out = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . log creation = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747412006/pilotlog.txt
[2025-07-27 11:34:59] 2025-07-27 18:34:26,250 | WARNING  | 
[2025-07-27 11:34:59] [begin log extracts]
[2025-07-27 11:34:59] - Log from pilotlog.txt -
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6747412006/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | extracted standard info from prmon json
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:34:59] 2025-07-27 18:34:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:34:59] 2025-07-27 18:34:26,238 | WARNING  | wrong length of table data, x=[1753641088.0], y=[1485.0] (must be same and length>=4)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . Timing measurements:
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . get job = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . initial setup = 6 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload setup = 13 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . stage-in = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,239 | INFO     | . payload execution = 61 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . stage-out = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | . log creation = 0 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | ..............................
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 11:34:59] 2025-07-27 18:34:26,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747412006/pilotlog.txt
[2025-07-27 11:34:59] [end log extracts]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,251 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,251 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | 
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | job summary report
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | --------------------------------------------------
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | PanDA job id: 6747412006
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | task id: 45743349
[2025-07-27 11:34:59] 2025-07-27 18:34:26,579 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 11:32:07,843 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | pilot state: failed 
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | transexitcode: 65
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | exeerrorcode: 65
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | exitcode: 65
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | nevents: 0
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | neventsw: 0
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | pid: 2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | pgrp: 2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:26,580 | INFO     | corecount: 8
[2025-07-27 11:34:59] 2025-07-27 18:34:26,581 | INFO     | event service: False
[2025-07-27 11:34:59] 2025-07-27 18:34:26,581 | INFO     | sizes: {0: 2397300, 1: 2397499, 10: 2397761, 12: 2397789, 79: 2421044, 80: 2425336, 81: 2425492, 210: 2425658}
[2025-07-27 11:34:59] 2025-07-27 18:34:26,581 | INFO     | --------------------------------------------------
[2025-07-27 11:34:59] 2025-07-27 18:34:26,581 | INFO     | 
[2025-07-27 11:34:59] 2025-07-27 18:34:26,581 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 11:34:59] 2025-07-27 18:34:26,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,711 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,711 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,711 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,713 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:34:59] 2025-07-27 18:34:26,713 | INFO     | job 6747412006 has completed (purged errors)
[2025-07-27 11:34:59] 2025-07-27 18:34:26,713 | INFO     | overall cleanup function is called
[2025-07-27 11:34:59] 2025-07-27 18:34:27,736 | INFO     | --- collectZombieJob: --- 10, [2569006]
[2025-07-27 11:34:59] 2025-07-27 18:34:27,736 | INFO     | zombie collector waiting for pid 2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:27,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:34:59] 2025-07-27 18:34:27,736 | INFO     | collected zombie processes
[2025-07-27 11:34:59] 2025-07-27 18:34:27,736 | INFO     | will attempt to kill all subprocesses of pid=2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:27,935 | INFO     | process IDs to be killed: [2569006] (in reverse order)
[2025-07-27 11:34:59] 2025-07-27 18:34:27,988 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:34:59] 2025-07-27 18:34:27,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:34:59] 2025-07-27 18:34:27,993 | INFO     | did not find any defunct processes belonging to 2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:27,998 | INFO     | did not find any defunct processes belonging to 2569006
[2025-07-27 11:34:59] 2025-07-27 18:34:27,998 | INFO     | ready for new job
[2025-07-27 11:34:59] 2025-07-27 18:34:27,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:34:59] 2025-07-27 18:34:28,000 | INFO     | ***************************************
[2025-07-27 11:34:59] 2025-07-27 18:34:28,000 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:34:59] 2025-07-27 18:34:28,000 | INFO     | ***************************************
[2025-07-27 11:34:59] 2025-07-27 18:34:28,000 | INFO     | 
[2025-07-27 11:34:59] 2025-07-27 18:34:28,013 | INFO     | architecture information:
[2025-07-27 11:34:59] 2025-07-27 18:34:28,014 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:34:59] 2025-07-27 18:34:28,025 | INFO     | cat /etc/os-release:
[2025-07-27 11:34:59] NAME="CentOS Linux"
[2025-07-27 11:34:59] VERSION="7 (Core)"
[2025-07-27 11:34:59] ID="centos"
[2025-07-27 11:34:59] ID_LIKE="rhel fedora"
[2025-07-27 11:34:59] VERSION_ID="7"
[2025-07-27 11:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:34:59] ANSI_COLOR="0;31"
[2025-07-27 11:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:34:59] HOME_URL="https://www.centos.org/"
[2025-07-27 11:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:34:59] 
[2025-07-27 11:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:34:59] 
[2025-07-27 11:34:59] 2025-07-27 18:34:28,025 | INFO     | ***************************************
[2025-07-27 11:34:59] 2025-07-27 18:34:28,529 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 11:34:59] 2025-07-27 18:34:28,627 | INFO     | sufficient remaining disk space (1389077987328 B)
[2025-07-27 11:34:59] 2025-07-27 18:34:28,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:34:59] 2025-07-27 18:34:28,628 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:34:59] 2025-07-27 18:34:28,628 | INFO     | update_server=False
[2025-07-27 11:34:59] 2025-07-27 18:34:28,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:34:59] 2025-07-27 18:34:28,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 11:34:59] 2025-07-27 18:34:28,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 11:34:59] 2025-07-27 18:34:28,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:34:59] 2025-07-27 18:34:28,830 | INFO     | will abort loop
[2025-07-27 11:34:59] 2025-07-27 18:34:28,920 | INFO     | all data control threads have been joined
[2025-07-27 11:34:59] 2025-07-27 18:34:29,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:34:59] 2025-07-27 18:34:29,634 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:29,750 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:29,824 | INFO     | all job control threads have been joined
[2025-07-27 11:34:59] 2025-07-27 18:34:29,836 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:29,926 | INFO     | [data] control thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:29,983 | INFO     | all payload control threads have been joined
[2025-07-27 11:34:59] 2025-07-27 18:34:30,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:34:59] 2025-07-27 18:34:30,059 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,127 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,180 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,421 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,700 | INFO     | [job] validate thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,830 | INFO     | [job] control thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:30,989 | INFO     | [payload] control thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:31,108 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:31,320 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:31,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:34:59] 2025-07-27 18:34:32,343 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:34,025 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:34:59] 2025-07-27 18:34:34,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571367667520)>', '<ExcThread(monitor, started 140570362103552)>']
[2025-07-27 11:34:59] 2025-07-27 18:34:39,409 | INFO     | all workflow threads have been joined
[2025-07-27 11:34:59] 2025-07-27 18:34:39,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:34:59] 2025-07-27 18:34:39,409 | INFO     | traces error code: 0
[2025-07-27 11:34:59] 2025-07-27 18:34:39,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:34:59] 2025-07-27 18:34:58,102 | INFO     | PID=2562683 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:34:59] 2025-07-27 18:34:58,103 | INFO     | .. there are 12 such processes running
[2025-07-27 11:34:59] 2025-07-27 18:34:58,104 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:34:59] 2025-07-27 18:34:58,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:34:59] 2025-07-27 18:34:58,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:34:59] 2025-07-27 18:34:58,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:34:59] 2025-07-27 18:34:58,104 | INFO     | [monitor] control thread has ended
[2025-07-27 11:34:59] 2025-07-27 18:34:58,210 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:34:59] 2025-07-27 18:34:58,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:34:59] 2025-07-27 18:34:58,251 [wrapper] pilotpid: 2562683
[2025-07-27 11:34:59] 2025-07-27 18:34:58,279 [wrapper] Pilot exit status: 0
[2025-07-27 11:34:59] 2025-07-27 18:34:58,437 [wrapper] pandaids: 6747412006
[2025-07-27 11:34:59] 2025-07-27 18:34:58,484 [wrapper] cleanup supervisor_pilot 2562689 2562684
[2025-07-27 11:34:59] 2025-07-27 18:34:58,498 [wrapper] Test setup, not cleaning
[2025-07-27 11:34:59] 2025-07-27 18:34:58,500 [wrapper] apfmon messages muted
[2025-07-27 11:34:59] 2025-07-27 18:34:58,502 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:34:59] 2025-07-27 18:34:58,503 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:34:59]  *** Error codes and diagnostics ***
[2025-07-27 11:34:59]     "exeErrorCode": 65,
[2025-07-27 11:34:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 11:34:59]     "pilotErrorCode": 1305,
[2025-07-27 11:34:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 11:34:59]  *** Listing of results directory ***
[2025-07-27 11:34:59] total 226300
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc    530466 Jul 27 06:04 pilot3.tar.gz
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc      5112 Jul 27 06:25 queuedata.json
[2025-07-27 11:34:59] -rwx------. 1 boinc boinc     36292 Jul 27 06:25 runpilot2-wrapper.sh
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc       100 Jul 27 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:34:59] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 11:29 run_atlas
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc       105 Jul 27 11:29 job.xml
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc 227650072 Jul 27 11:29 EVNT.45743347._002716.pool.root.1
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc     15095 Jul 27 11:29 start_atlas.sh
[2025-07-27 11:34:59] drwxrwx--x. 2 boinc boinc      4096 Jul 27 11:29 shared
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc    542902 Jul 27 11:29 input.tar.gz
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc      6447 Jul 27 11:29 init_data.xml
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc         0 Jul 27 11:29 boinc_lockfile
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc      2562 Jul 27 11:29 pandaJob.out
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc    980125 Jul 27 11:30 agis_schedconf.cvmfs.json
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc   1593052 Jul 27 11:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:34:59] drwx------. 4 boinc boinc      4096 Jul 27 11:30 pilot3
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc       523 Jul 27 11:32 boinc_task_state.xml
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc       957 Jul 27 11:32 memory_monitor_summary.json
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc     20539 Jul 27 11:32 log.45743349._049139.job.log.tgz.1
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc      8386 Jul 27 11:34 heartbeat.json
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc      8192 Jul 27 11:34 boinc_mmap_file
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc        22 Jul 27 11:34 wrapper_checkpoint.txt
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc        95 Jul 27 11:34 pilot_heartbeat.json
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc       823 Jul 27 11:34 pilotlog.txt
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc     79984 Jul 27 11:34 log.45743349._049139.job.log.1
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc       188 Jul 27 11:34 output.list
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc       620 Jul 27 11:34 runtime_log
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc    122880 Jul 27 11:34 result.tar.gz
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc      8648 Jul 27 11:34 runtime_log.err
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc       645 Jul 27 11:34 iWTNDmPYG07n9Rq4apOajLDm4fhM0noT9bVof3QYDmFb2KDmUvxyPo.diag
[2025-07-27 11:34:59] -rw-r--r--. 1 boinc boinc     21989 Jul 27 11:34 stderr.txt
[2025-07-27 11:34:59] No HITS result produced
[2025-07-27 11:34:59]  *** Contents of shared directory: ***
[2025-07-27 11:34:59] total 222988
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc 227650072 Jul 27 11:29 ATLAS.root_0
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc     15095 Jul 27 11:29 start_atlas.sh
[2025-07-27 11:34:59] -rw-r--r--. 2 boinc boinc    542902 Jul 27 11:29 input.tar.gz
[2025-07-27 11:34:59] -rw-------. 1 boinc boinc    122880 Jul 27 11:34 result.tar.gz
11:35:00 (2558879): run_atlas exited; CPU time 26.006202
11:35:00 (2558879): called boinc_finish(0)

</stderr_txt>
]]>

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