Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:10:22 (2091582): wrapper (7.7.26015): starting
14:10:22 (2091582): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 14:10:22] Arguments: --nthreads 8
[2025-07-27 14:10:22] Threads: 8
[2025-07-27 14:10:22] Checking for CVMFS
[2025-07-27 14:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:10:22] 2.13.1.0 2445429 4675 130424 148820 1 188 34984469 40960000 7435 16776704 0 75272622 99.999 167227 53240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:10:22] CVMFS is ok
[2025-07-27 14:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:10:22] Further information can be found at the LHC@home message board.
[2025-07-27 14:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:10:22] Checking for apptainer binary...
[2025-07-27 14:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:10:22] Running /usr/bin/apptainer --version
[2025-07-27 14:10:22] apptainer version 1.4.1-1.el9
[2025-07-27 14:10:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:10:22] c-208-40.aglt2.org
[2025-07-27 14:10:22] apptainer works
[2025-07-27 14:10:22] Set ATHENA_PROC_NUMBER=8
[2025-07-27 14:10:22] Set ATHENA_CORE_NUMBER=8
[2025-07-27 14:10:22] Starting ATLAS job with PandaID=6747322428
[2025-07-27 14:10:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:08:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:08:00]  is_tar=False
[2025-07-27 15:08:00]  lfn=log.45743349._046809.job.log.tgz.1
[2025-07-27 15:08:00]  mtime=0
[2025-07-27 15:08:00]  protocol_id=None
[2025-07-27 15:08:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:08:00]  replicas=None
[2025-07-27 15:08:00]  scope=mc23_13p6TeV
[2025-07-27 15:08:00]  status=None
[2025-07-27 15:08:00]  status_code=0
[2025-07-27 15:08:00]  storage_token=
[2025-07-27 15:08:00]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6747322428/log.45743349._046809.job.log.tgz.1
[2025-07-27 15:08:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/e7/log.45743349._046809.job.log.tgz.1
[2025-07-27 15:08:00]  workdir=None
[2025-07-27 15:08:00] ]
[2025-07-27 15:08:00] 2025-07-27 19:07:11,024 | INFO     | transferring file log.45743349._046809.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6747322428/log.45743349._046809.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 15:08:00] 2025-07-27 19:07:11,024 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6747322428/log.45743349._046809.job.log.tgz.1 /tmp/boinchome/slots/12/log.45743349._046809.j
[2025-07-27 15:08:00] 2025-07-27 19:07:11,038 | INFO     | adding to output.list: log.45743349._046809.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/e7/log.45743349._046809.job.log.tg
[2025-07-27 15:08:00] 2025-07-27 19:07:11,038 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:08:00] 2025-07-27 19:07:11,039 | INFO     | summary of transferred files:
[2025-07-27 15:08:00] 2025-07-27 19:07:11,039 | INFO     |  -- lfn=log.45743349._046809.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:08:00] 2025-07-27 19:07:11,039 | INFO     | stage-out finished correctly
[2025-07-27 15:08:00] 2025-07-27 19:07:11,068 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:08:00] 2025-07-27 19:07:11,589 | INFO     | job 6747322428 has state=finished
[2025-07-27 15:08:00] 2025-07-27 19:07:11,589 | INFO     | preparing for final server update for job 6747322428 in state='finished'
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | job 6747322428 has finished - writing final server update
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:08:00] 2025-07-27 19:07:11,590 | INFO     | executing command: lscpu
[2025-07-27 15:08:00] 2025-07-27 19:07:11,642 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:08:00] 2025-07-27 19:07:14,110 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 15:08:00] 2025-07-27 19:07:14,113 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3580.0725703125036
[2025-07-27 15:08:00] 2025-07-27 19:07:14,121 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6747322428/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,121 | INFO     | extracted standard info from prmon json
[2025-07-27 15:08:00] 2025-07-27 19:07:14,121 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:08:00] 2025-07-27 19:07:14,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | INFO     | sum of square deviations: 36465800.0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | INFO     | sum of deviations: 270593499.00000006
[2025-07-27 15:08:00] 2025-07-27 19:07:14,122 | INFO     | mean x: 1753641618.0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | mean y: 2518564.4693877553
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | -- intersect: -13010332419.374146
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | intersect: -13010332419.374146
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | chi2: 9.438275661360516e-05
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | -- intersect: -13010332419.374146
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | current memory leak: 7.42 B/s (using 49 data points, chi2=0.00)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | could have reported an average CPU frequency of 3616 MHz (5 samples)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | ..............................
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . Timing measurements:
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . get job = 0 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . initial setup = 2 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . payload setup = 3 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . stage-in = 0 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . payload execution = 3381 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . stage-out = 0 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | . log creation = 0 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,123 | INFO     | ..............................
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | 
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | job summary report
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | --------------------------------------------------
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | PanDA job id: 6747322428
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | task id: 45743349
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | errors: (none)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | pilot state: finished 
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | transexitcode: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | exeerrorcode: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | exeerrordiag: 
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | exitcode: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | exitmsg: OK
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | cpuconsumptiontime: 25342 s
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | nevents: 400
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | neventsw: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | pid: 2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | pgrp: 2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | corecount: 8
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | event service: False
[2025-07-27 15:08:00] 2025-07-27 19:07:14,155 | INFO     | sizes: {0: 2397423, 3: 2397685, 11: 2397713, 3389: 2432427, 3392: 2432597}
[2025-07-27 15:08:00] 2025-07-27 19:07:14,156 | INFO     | --------------------------------------------------
[2025-07-27 15:08:00] 2025-07-27 19:07:14,156 | INFO     | 
[2025-07-27 15:08:00] 2025-07-27 19:07:14,156 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-07-27 15:08:00] 2025-07-27 19:07:14,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | job 6747322428 has completed (purged errors)
[2025-07-27 15:08:00] 2025-07-27 19:07:14,170 | INFO     | overall cleanup function is called
[2025-07-27 15:08:00] 2025-07-27 19:07:15,177 | INFO     | --- collectZombieJob: --- 10, [2133901]
[2025-07-27 15:08:00] 2025-07-27 19:07:15,177 | INFO     | zombie collector waiting for pid 2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:15,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:08:00] 2025-07-27 19:07:15,177 | INFO     | collected zombie processes
[2025-07-27 15:08:00] 2025-07-27 19:07:15,178 | INFO     | will attempt to kill all subprocesses of pid=2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:15,398 | INFO     | process IDs to be killed: [2133901] (in reverse order)
[2025-07-27 15:08:00] 2025-07-27 19:07:15,480 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:08:00] 2025-07-27 19:07:15,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:08:00] 2025-07-27 19:07:15,508 | INFO     | did not find any defunct processes belonging to 2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:15,533 | INFO     | did not find any defunct processes belonging to 2133901
[2025-07-27 15:08:00] 2025-07-27 19:07:15,533 | INFO     | ready for new job
[2025-07-27 15:08:00] 2025-07-27 19:07:15,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:08:00] 2025-07-27 19:07:15,534 | INFO     | ***************************************
[2025-07-27 15:08:00] 2025-07-27 19:07:15,534 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:08:00] 2025-07-27 19:07:15,534 | INFO     | ***************************************
[2025-07-27 15:08:00] 2025-07-27 19:07:15,534 | INFO     | 
[2025-07-27 15:08:00] 2025-07-27 19:07:15,538 | INFO     | architecture information:
[2025-07-27 15:08:00] 2025-07-27 19:07:15,538 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:08:00] 2025-07-27 19:07:15,549 | INFO     | cat /etc/os-release:
[2025-07-27 15:08:00] NAME="CentOS Linux"
[2025-07-27 15:08:00] VERSION="7 (Core)"
[2025-07-27 15:08:00] ID="centos"
[2025-07-27 15:08:00] ID_LIKE="rhel fedora"
[2025-07-27 15:08:00] VERSION_ID="7"
[2025-07-27 15:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:08:00] ANSI_COLOR="0;31"
[2025-07-27 15:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:08:00] HOME_URL="https://www.centos.org/"
[2025-07-27 15:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:08:00] 
[2025-07-27 15:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:08:00] 
[2025-07-27 15:08:00] 2025-07-27 19:07:15,549 | INFO     | ***************************************
[2025-07-27 15:08:00] 2025-07-27 19:07:15,687 | WARNING  | process 2133901 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 15:08:00] 2025-07-27 19:07:15,842 | INFO     | using path: /tmp/boinchome/slots/12/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:08:00] 2025-07-27 19:07:16,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-27 15:08:00] 2025-07-27 19:07:16,060 | INFO     | number of running child processes to parent process 2133901: 1
[2025-07-27 15:08:00] 2025-07-27 19:07:16,060 | INFO     | maximum number of monitored processes: 6
[2025-07-27 15:08:00] 2025-07-27 19:07:16,060 | INFO     | aborting job monitoring since job object (job id=6747322428) has expired
[2025-07-27 15:08:00] 2025-07-27 19:07:16,066 | INFO     | sufficient remaining disk space (162787229696 B)
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | INFO     | update_server=False
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:08:00] 2025-07-27 19:07:16,067 | INFO     | will abort loop
[2025-07-27 15:08:00] 2025-07-27 19:07:16,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:08:00] 2025-07-27 19:07:16,632 | INFO     | all data control threads have been joined
[2025-07-27 15:08:00] 2025-07-27 19:07:16,811 | INFO     | all job control threads have been joined
[2025-07-27 15:08:00] 2025-07-27 19:07:16,850 | INFO     | all payload control threads have been joined
[2025-07-27 15:08:00] 2025-07-27 19:07:17,072 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,072 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,073 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:08:00] 2025-07-27 19:07:17,562 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,591 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,637 | INFO     | [data] control thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,739 | INFO     | [job] validate thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,745 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,804 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,816 | INFO     | [job] control thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:17,855 | INFO     | [payload] control thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:18,010 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:18,581 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:18,605 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:21,134 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:26,123 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:08:00] 2025-07-27 19:07:27,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:08:00] 2025-07-27 19:07:28,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004460615488)>', '<ExcThread(monitor, started 140003803895552)>']
[2025-07-27 15:08:00] 2025-07-27 19:07:33,697 | INFO     | all workflow threads have been joined
[2025-07-27 15:08:00] 2025-07-27 19:07:33,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:08:00] 2025-07-27 19:07:33,697 | INFO     | traces error code: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:33,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:08:00] 2025-07-27 19:07:47,368 | INFO     | PID=2103232 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:08:00] 2025-07-27 19:07:47,368 | INFO     | .. there are 15 such processes running
[2025-07-27 15:08:00] 2025-07-27 19:07:47,369 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:08:00] 2025-07-27 19:07:47,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:08:00] 2025-07-27 19:07:47,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:08:00] 2025-07-27 19:07:47,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:08:00] 2025-07-27 19:07:47,369 | INFO     | [monitor] control thread has ended
[2025-07-27 15:08:00] 2025-07-27 19:07:47,430 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:08:00] 2025-07-27 19:07:47,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:08:00] 2025-07-27 19:07:47,434 [wrapper] pilotpid: 2103232
[2025-07-27 15:08:00] 2025-07-27 19:07:47,435 [wrapper] Pilot exit status: 0
[2025-07-27 15:08:00] 2025-07-27 19:07:47,441 [wrapper] pandaids: 6747322428
[2025-07-27 15:08:00] 2025-07-27 19:07:47,498 [wrapper] cleanup supervisor_pilot 2291267 2103234
[2025-07-27 15:08:00] 2025-07-27 19:07:47,500 [wrapper] Test setup, not cleaning
[2025-07-27 15:08:00] 2025-07-27 19:07:47,502 [wrapper] apfmon messages muted
[2025-07-27 15:08:00] 2025-07-27 19:07:47,503 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:08:00] 2025-07-27 19:07:47,505 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:08:00]  *** Error codes and diagnostics ***
[2025-07-27 15:08:00]     "exeErrorCode": 0,
[2025-07-27 15:08:00]     "exeErrorDiag": "",
[2025-07-27 15:08:00]     "pilotErrorCode": 0,
[2025-07-27 15:08:00]     "pilotErrorDiag": "",
[2025-07-27 15:08:00]  *** Listing of results directory ***
[2025-07-27 15:08:00] total 433784
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 06:10 pilot3.tar.gz
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 06:22 queuedata.json
[2025-07-27 15:08:00] -rwx------. 1 boincer umatlas     36292 Jul 27 06:23 runpilot2-wrapper.sh
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:08:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:10 run_atlas
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:10 job.xml
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas 229967565 Jul 27 14:10 EVNT.45743347._001248.pool.root.1
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:10 start_atlas.sh
[2025-07-27 15:08:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:10 shared
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:10 input.tar.gz
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:10 boinc_lockfile
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 14:10 pandaJob.out
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas    980117 Jul 27 14:10 agis_schedconf.cvmfs.json
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:08:00] drwx------. 4 boincer umatlas      4096 Jul 27 14:10 pilot3
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas      7175 Jul 27 15:05 init_data.xml
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas 209075503 Jul 27 15:06 HITS.45743349._046809.pool.root.1
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:06 boinc_task_state.xml
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas      1027 Jul 27 15:07 memory_monitor_summary.json
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas    292964 Jul 27 15:07 log.45743349._046809.job.log.tgz.1
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas      7763 Jul 27 15:07 heartbeat.json
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas        95 Jul 27 15:07 pilot_heartbeat.json
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas       823 Jul 27 15:07 pilotlog.txt
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas    346204 Jul 27 15:07 log.45743349._046809.job.log.1
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas       357 Jul 27 15:07 output.list
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:07 runtime_log
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas    655360 Jul 27 15:07 result.tar.gz
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas      8674 Jul 27 15:07 runtime_log.err
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas       651 Jul 27 15:07 CIOLDmMiD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8zULDm3NFJsm.diag
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:07 wrapper_checkpoint.txt
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:08 boinc_mmap_file
[2025-07-27 15:08:00] -rw-r--r--. 1 boincer umatlas     21534 Jul 27 15:08 stderr.txt
[2025-07-27 15:08:00] HITS file was successfully produced:
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas 209075503 Jul 27 15:06 shared/HITS.pool.root.1
[2025-07-27 15:08:00]  *** Contents of shared directory: ***
[2025-07-27 15:08:00] total 429952
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas 229967565 Jul 27 14:10 ATLAS.root_0
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:10 start_atlas.sh
[2025-07-27 15:08:00] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 14:10 input.tar.gz
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas 209075503 Jul 27 15:06 HITS.pool.root.1
[2025-07-27 15:08:00] -rw-------. 1 boincer umatlas    655360 Jul 27 15:07 result.tar.gz
15:08:01 (2091582): run_atlas exited; CPU time 25431.620172
15:08:01 (2091582): called boinc_finish(0)

</stderr_txt>
]]>

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