Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:15:42 (676633): wrapper (7.7.26015): starting
09:15:42 (676633): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 09:15:42] Arguments: --nthreads 6
[2025-07-28 09:15:42] Threads: 6
[2025-07-28 09:15:42] Checking for CVMFS
[2025-07-28 09:15:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 09:15:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 09:15:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 09:15:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 09:15:47] 2.11.5.0 2646 1061 69872 148829 0 57 29525529 52428801 0 130560 0 1851809 99.996 35773 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.122:3128 0
[2025-07-28 09:15:47] CVMFS is ok
[2025-07-28 09:15:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:15:47] Checking for apptainer binary...
[2025-07-28 09:15:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 09:15:47] Running /usr/bin/apptainer --version
[2025-07-28 09:15:48] apptainer version 1.3.6-1.el9
[2025-07-28 09:15:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:15:48] testio002
[2025-07-28 09:15:48] apptainer works
[2025-07-28 09:15:48] Set ATHENA_PROC_NUMBER=6
[2025-07-28 09:15:48] Set ATHENA_CORE_NUMBER=6
[2025-07-28 09:15:48] Starting ATLAS job with PandaID=6747500225
[2025-07-28 09:15:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 10:39:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 10:39:22] 2025-07-28 01:38:15,331 | INFO     | monitor loop #369: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:15,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:17,833 | INFO     | monitor loop #370: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:17,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:20,335 | INFO     | monitor loop #371: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:20,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:20,579 | INFO     | PID=681246 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 10:39:22] 2025-07-28 01:38:20,579 | INFO     | .. there are 2 such processes running
[2025-07-28 10:39:22] 2025-07-28 01:38:22,837 | INFO     | monitor loop #372: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:22,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:25,339 | INFO     | monitor loop #373: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:25,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:27,841 | INFO     | monitor loop #374: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:27,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:30,343 | INFO     | monitor loop #375: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:30,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:32,845 | INFO     | monitor loop #376: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:32,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:35,347 | INFO     | monitor loop #377: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:35,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:35,614 | INFO     | 4965s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 10:39:22] 2025-07-28 01:38:37,849 | INFO     | monitor loop #378: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:37,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:40,351 | INFO     | monitor loop #379: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:40,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:42,672 | INFO     | PID=681246 has CPU usage=0.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 10:39:22] 2025-07-28 01:38:42,672 | INFO     | .. there are 2 such processes running
[2025-07-28 10:39:22] 2025-07-28 01:38:42,852 | INFO     | monitor loop #380: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:42,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:45,355 | INFO     | monitor loop #381: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:45,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:47,857 | INFO     | monitor loop #382: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:47,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:50,359 | INFO     | monitor loop #383: job 0:6747500225 is in state 'finished'
[2025-07-28 10:39:22] 2025-07-28 01:38:50,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,031 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 10:39:22] 2025-07-28 01:38:51,032 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4402.79425
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6747500225/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | INFO     | extracted standard info from prmon json
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 10:39:22] 2025-07-28 01:38:51,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 10:39:22] 2025-07-28 01:38:51,035 | INFO     | fitting pss+swap vs Time
[2025-07-28 10:39:22] 2025-07-28 01:38:51,035 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | sum of deviations: 9041447785.5
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | mean x: 1753664305.5
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | mean y: 2486043.608108108
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | -- intersect: -126206469791.96034
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | intersect: -126206469791.96034
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | chi2: 1.5719367626344205
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | -- intersect: -126206469791.96034
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | current memory leak: 71.97 B/s (using 74 data points, chi2=1.57)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | could have reported an average CPU frequency of 4351 MHz (6 samples)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | ..............................
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . Timing measurements:
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . get job = 0 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . initial setup = 8 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . payload setup = 1 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . stage-in = 0 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,036 | INFO     | . payload execution = 4909 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,037 | INFO     | . stage-out = 0 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,037 | INFO     | . log creation = 0 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,037 | INFO     | ..............................
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | 
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | job summary report
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | --------------------------------------------------
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | PanDA job id: 6747500225
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | task id: 45743349
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | errors: (none)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | pilot state: finished 
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | transexitcode: 0
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | exeerrorcode: 0
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | exeerrordiag: 
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | exitcode: 0
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | exitmsg: OK
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | cpuconsumptiontime: 25263 s
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | nevents: 400
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | neventsw: 0
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | pid: 703864
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | pgrp: 703864
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | corecount: 6
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | event service: False
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | sizes: {0: 2397475, 1: 2397737, 10: 2397765, 4915: 2424089, 4916: 2433143, 4961: 2433281}
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | --------------------------------------------------
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | 
[2025-07-28 10:39:22] 2025-07-28 01:38:51,084 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | job 6747500225 has completed (purged errors)
[2025-07-28 10:39:22] 2025-07-28 01:38:51,091 | INFO     | overall cleanup function is called
[2025-07-28 10:39:22] 2025-07-28 01:38:52,096 | INFO     | --- collectZombieJob: --- 10, [703864]
[2025-07-28 10:39:22] 2025-07-28 01:38:52,096 | INFO     | zombie collector waiting for pid 703864
[2025-07-28 10:39:22] 2025-07-28 01:38:52,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 10:39:22] 2025-07-28 01:38:52,096 | INFO     | collected zombie processes
[2025-07-28 10:39:22] 2025-07-28 01:38:52,096 | INFO     | will attempt to kill all subprocesses of pid=703864
[2025-07-28 10:39:22] 2025-07-28 01:38:52,127 | INFO     | process IDs to be killed: [703864] (in reverse order)
[2025-07-28 10:39:22] 2025-07-28 01:38:52,139 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 10:39:22] 2025-07-28 01:38:52,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 10:39:22] 2025-07-28 01:38:52,141 | INFO     | did not find any defunct processes belonging to 703864
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | did not find any defunct processes belonging to 703864
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | ready for new job
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | ***************************************
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | ***************************************
[2025-07-28 10:39:22] 2025-07-28 01:38:52,142 | INFO     | 
[2025-07-28 10:39:22] 2025-07-28 01:38:52,143 | INFO     | architecture information:
[2025-07-28 10:39:22] 2025-07-28 01:38:52,143 | INFO     | executing command: cat /etc/os-release
[2025-07-28 10:39:22] 2025-07-28 01:38:52,146 | INFO     | cat /etc/os-release:
[2025-07-28 10:39:22] NAME="CentOS Linux"
[2025-07-28 10:39:22] VERSION="7 (Core)"
[2025-07-28 10:39:22] ID="centos"
[2025-07-28 10:39:22] ID_LIKE="rhel fedora"
[2025-07-28 10:39:22] VERSION_ID="7"
[2025-07-28 10:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 10:39:22] ANSI_COLOR="0;31"
[2025-07-28 10:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 10:39:22] HOME_URL="https://www.centos.org/"
[2025-07-28 10:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 10:39:22] 
[2025-07-28 10:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 10:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 10:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 10:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 10:39:22] 
[2025-07-28 10:39:22] 2025-07-28 01:38:52,147 | INFO     | ***************************************
[2025-07-28 10:39:22] 2025-07-28 01:38:52,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | INFO     | sufficient remaining disk space (315214528512 B)
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | INFO     | update_server=False
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 10:39:22] 2025-07-28 01:38:52,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:39:22] 2025-07-28 01:38:52,862 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 10:39:22] 2025-07-28 01:38:52,862 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 10:39:22] 2025-07-28 01:38:52,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:39:22] 2025-07-28 01:38:52,862 | INFO     | will abort loop
[2025-07-28 10:39:22] 2025-07-28 01:38:52,986 | INFO     | all payload control threads have been joined
[2025-07-28 10:39:22] 2025-07-28 01:38:53,251 | INFO     | all data control threads have been joined
[2025-07-28 10:39:22] 2025-07-28 01:38:53,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 10:39:22] 2025-07-28 01:38:53,420 | INFO     | all job control threads have been joined
[2025-07-28 10:39:22] 2025-07-28 01:38:53,659 | INFO     | [job] retrieve thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:53,659 | INFO     | [job] queue monitor thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:53,867 | INFO     | [job] job monitor thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:53,991 | INFO     | [payload] control thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,099 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,139 | INFO     | [payload] validate_post thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,253 | INFO     | [data] control thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,425 | INFO     | [job] control thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,659 | INFO     | [data] copytool_out thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,743 | INFO     | [data] copytool_in thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,912 | INFO     | [job] validate thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,937 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:54,943 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:55,151 | INFO     | [payload] failed_post thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:38:57,341 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:39:02,759 | INFO     | job.realtimelogging is not enabled
[2025-07-28 10:39:22] 2025-07-28 01:39:03,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 10:39:22] 2025-07-28 01:39:04,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812282787648)>', '<ExcThread(monitor, started 139811654465280)>']
[2025-07-28 10:39:22] 2025-07-28 01:39:09,691 | INFO     | all workflow threads have been joined
[2025-07-28 10:39:22] 2025-07-28 01:39:09,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 10:39:22] 2025-07-28 01:39:09,691 | INFO     | traces error code: 0
[2025-07-28 10:39:22] 2025-07-28 01:39:09,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | INFO     | PID=681246 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 10:39:22] 2025-07-28 01:39:22,785 | INFO     | [monitor] control thread has ended
[2025-07-28 10:39:22] 2025-07-28 01:39:22,818 [wrapper] ==== pilot stdout END ====
[2025-07-28 10:39:22] 2025-07-28 01:39:22,819 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 10:39:22] 2025-07-28 01:39:22,820 [wrapper] pilotpid: 681246
[2025-07-28 10:39:22] 2025-07-28 01:39:22,821 [wrapper] Pilot exit status: 0
[2025-07-28 10:39:22] 2025-07-28 01:39:22,823 [wrapper] pandaids: 6747500225
[2025-07-28 10:39:22] 2025-07-28 01:39:22,830 [wrapper] cleanup supervisor_pilot  719766 681248
[2025-07-28 10:39:22] 2025-07-28 01:39:22,830 [wrapper] Test setup, not cleaning
[2025-07-28 10:39:22] 2025-07-28 01:39:22,834 [wrapper] apfmon messages muted
[2025-07-28 10:39:22] 2025-07-28 01:39:22,834 [wrapper] ==== wrapper stdout END ====
[2025-07-28 10:39:22] 2025-07-28 01:39:22,835 [wrapper] ==== wrapper stderr END ====
[2025-07-28 10:39:22]  *** Error codes and diagnostics ***
[2025-07-28 10:39:22]     "exeErrorCode": 0,
[2025-07-28 10:39:22]     "exeErrorDiag": "",
[2025-07-28 10:39:22]     "pilotErrorCode": 0,
[2025-07-28 10:39:22]     "pilotErrorDiag": "",
[2025-07-28 10:39:22]  *** Listing of results directory ***
[2025-07-28 10:39:22] total 435832
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc    530466 Jul 27 23:53 pilot3.tar.gz
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc      5112 Jul 28 00:29 queuedata.json
[2025-07-28 10:39:22] -rwx------. 1 boinc boinc     36292 Jul 28 00:32 runpilot2-wrapper.sh
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc       100 Jul 28 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 10:39:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 09:15 run_atlas
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc       105 Jul 28 09:15 job.xml
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc     15095 Jul 28 09:15 start_atlas.sh
[2025-07-28 10:39:22] drwxrwx--x. 2 boinc boinc        68 Jul 28 09:15 shared
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc    542895 Jul 28 09:15 input.tar.gz
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc      9627 Jul 28 09:15 init_data.xml
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc 231498345 Jul 28 09:15 EVNT.45743347._002760.pool.root.1
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc         0 Jul 28 09:15 boinc_lockfile
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc      2563 Jul 28 09:15 pandaJob.out
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc    980125 Jul 28 09:15 agis_schedconf.cvmfs.json
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc   1593052 Jul 28 09:15 agis_ddmendpoints.agis.ALL.json
[2025-07-28 10:39:22] drwx------. 4 boinc boinc      4096 Jul 28 09:15 pilot3
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc 209366135 Jul 28 10:37 HITS.45743349._051597.pool.root.1
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc       529 Jul 28 10:37 boinc_task_state.xml
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc      1023 Jul 28 10:38 memory_monitor_summary.json
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc    290928 Jul 28 10:38 log.45743349._051597.job.log.tgz.1
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc      7797 Jul 28 10:38 heartbeat.json
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc      8192 Jul 28 10:38 boinc_mmap_file
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc        27 Jul 28 10:38 wrapper_checkpoint.txt
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc       746 Jul 28 10:39 pilotlog.txt
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc        95 Jul 28 10:39 pilot_heartbeat.json
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc    490393 Jul 28 10:39 log.45743349._051597.job.log.1
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc       357 Jul 28 10:39 output.list
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc       620 Jul 28 10:39 runtime_log
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc    798720 Jul 28 10:39 result.tar.gz
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc       642 Jul 28 10:39 tmgLDmWXI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcgVLDm4jcWsn.diag
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc      8618 Jul 28 10:39 runtime_log.err
[2025-07-28 10:39:22] -rw-r--r--. 1 boinc boinc     22117 Jul 28 10:39 stderr.txt
[2025-07-28 10:39:22] HITS file was successfully produced:
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc 209366135 Jul 28 10:37 shared/HITS.pool.root.1
[2025-07-28 10:39:22]  *** Contents of shared directory: ***
[2025-07-28 10:39:22] total 431864
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc     15095 Jul 28 09:15 start_atlas.sh
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc    542895 Jul 28 09:15 input.tar.gz
[2025-07-28 10:39:22] -rw-r--r--. 2 boinc boinc 231498345 Jul 28 09:15 ATLAS.root_0
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc 209366135 Jul 28 10:37 HITS.pool.root.1
[2025-07-28 10:39:22] -rw-------. 1 boinc boinc    798720 Jul 28 10:39 result.tar.gz
10:39:24 (676633): run_atlas exited; CPU time 25286.185824
10:39:24 (676633): called boinc_finish(0)

</stderr_txt>
]]>

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