Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 19:21:46 (10628): Detected: vboxwrapper 26206
2025-07-27 19:21:46 (10628): Detected: BOINC client v8.0.4
2025-07-27 19:21:47 (10628): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-27 19:21:47 (10628): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 19:21:48 (10628): Create VM. (boinc_0847a1884309bc3a, slot#1)
2025-07-27 19:21:49 (10628): Setting Memory Size for VM. (4200MB)
2025-07-27 19:21:49 (10628): Setting CPU Count for VM. (2)
2025-07-27 19:21:50 (10628): Setting Chipset Options for VM.
2025-07-27 19:21:50 (10628): Setting Graphics Controller Options for VM.
2025-07-27 19:21:50 (10628): Setting Boot Options for VM.
2025-07-27 19:21:51 (10628): Setting Network Configuration for NAT.
2025-07-27 19:21:51 (10628): Enabling VM Network Access.
2025-07-27 19:21:51 (10628): Disabling USB Support for VM.
2025-07-27 19:21:52 (10628): Disabling COM Port Support for VM.
2025-07-27 19:21:52 (10628): Disabling LPT Port Support for VM.
2025-07-27 19:21:52 (10628): Disabling Audio Support for VM.
2025-07-27 19:21:52 (10628): Disabling Clipboard Support for VM.
2025-07-27 19:21:53 (10628): Disabling Drag and Drop Support for VM.
2025-07-27 19:21:53 (10628): Adding storage controller(s) to VM.
2025-07-27 19:21:53 (10628): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 19:21:56 (10628): Adding VirtualBox Guest Additions to VM.
2025-07-27 19:21:56 (10628): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 19:21:57 (10628): forwarding host port 51287 to guest port 80
2025-07-27 19:21:57 (10628): Enabling remote desktop for VM.
2025-07-27 19:21:57 (10628): Required extension pack not installed, remote desktop not enabled.
2025-07-27 19:21:57 (10628): Enabling shared directory for VM.
2025-07-27 19:21:58 (10628): Starting VM using VBoxManage interface. (boinc_0847a1884309bc3a, slot#1)
2025-07-27 19:22:03 (10628): Successfully started VM. (PID = '19516')
2025-07-27 19:22:03 (10628): Reporting VM Process ID to BOINC.
2025-07-27 19:22:03 (10628): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-27 19:22:03 (10628): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 19:22:03 (10628): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 19:22:03 (10628): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 19:22:03 (10628): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 19:22:03 (10628): Detected: Web Application Enabled (http://localhost:51287)
2025-07-27 19:22:03 (10628): Preference change detected
2025-07-27 19:22:03 (10628): Setting CPU throttle for VM. (90%)
2025-07-27 19:22:03 (10628): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 19:22:05 (10628): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 19:22:05 (10628): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 19:22:08 (10628): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 19:22:08 (10628): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 19:22:08 (10628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 19:22:16 (10628): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 19:22:16 (10628): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 19:22:29 (10628): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000121 main     Log opened 2025-07-27T19:22:27.521036000Z
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000211 main     OS Product: Linux
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000244 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000271 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000289 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000290 main     Process ID: 1273
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.000290 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 19:22:29 (10628): Guest Log: 00:00:00.001068 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 19:22:29 (10628): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 19:22:29 (10628): Guest Log: [INFO] Mounting shared directory
2025-07-27 19:22:29 (10628): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 19:22:32 (10628): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 19:22:32 (10628): Guest Log: [INFO] Detected branch: prod
2025-07-27 19:22:32 (10628): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 19:22:32 (10628): Guest Log: Copying input files
2025-07-27 19:22:33 (10628): Guest Log: Copied input files into RunAtlas.
2025-07-27 19:22:33 (10628): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 19:22:33 (10628): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 19:22:33 (10628): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 19:22:33 (10628): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 19:22:39 (10628): Guest Log: 00:00:10.004485 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 905 887 000ns (GuestNow=1 753 640 558 619 235 000 ns GuestLast=1 753 644 147 525 122 000 ns fSetTimeLastLoop=true )
2025-07-27 19:22:41 (10628): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 19:22:41 (10628): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 19:22:41 (10628): Guest Log: 2.6.3.0 1546 0 30020 148821 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 19:22:44 (10628): Guest Log: copied the webapp to /var/www
2025-07-27 19:22:44 (10628): Guest Log: ATHENA_PROC_NUMBER=2
2025-07-27 19:22:44 (10628): Guest Log: ATHENA_CORE_NUMBER=2
2025-07-27 19:22:44 (10628): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 19:22:44 (10628): Guest Log:  *** Starting ATLAS job. (PandaID=6746830591 taskID=45758747) ***
2025-07-27 21:02:06 (10628): Status Report: Elapsed Time: '6000.000000'
2025-07-27 21:02:06 (10628): Status Report: CPU Time: '10252.953125'
2025-07-27 22:42:08 (10628): Status Report: Elapsed Time: '12000.000000'
2025-07-27 22:42:08 (10628): Status Report: CPU Time: '21112.140625'
2025-07-27 23:15:17 (10628): Guest Log:  *** Job finished ***
2025-07-27 23:15:17 (10628): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:03,097 | INFO     | [payload] validate_pre thread has finished
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:03,098 | INFO     | [job] validate thread has finished
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:04,969 | INFO     | [data] queue_monitor thread has finished
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:05,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785123866432)>', '<ExcThread(monitor, started 139784450197248)>']
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:05,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:05,682 | INFO     | [monitor] control thread has ended
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,650 | INFO     | all workflow threads have been joined
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,650 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,650 | INFO     | traces error code: 0
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,749 [wrapper] ==== pilot stdout END ====
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,752 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,756 [wrapper] pilotpid: 5841
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,759 [wrapper] Pilot exit status: 0
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,863 [wrapper] pandaids: 6746830591
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,888 [wrapper] cleanup supervisor_pilot 13203 5842
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,892 [wrapper] Test setup, not cleaning
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,895 [wrapper] apfmon messages muted
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,899 [wrapper] ==== wrapper stdout END ====
2025-07-27 23:15:17 (10628): Guest Log: 2025-07-27 22:15:10,902 [wrapper] ==== wrapper stderr END ====
2025-07-27 23:15:17 (10628): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 23:15:17 (10628): Guest Log:     "exeErrorCode": 0,
2025-07-27 23:15:17 (10628): Guest Log:     "exeErrorDiag": "",
2025-07-27 23:15:17 (10628): Guest Log:     "pilotErrorCode": 0,
2025-07-27 23:15:17 (10628): Guest Log:     "pilotErrorDiag": "",
2025-07-27 23:15:17 (10628): Guest Log:  *** Listing of results directory ***
2025-07-27 23:15:17 (10628): Guest Log: total 181080
2025-07-27 23:15:17 (10628): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 09:06 pilot3.tar.gz
2025-07-27 23:15:17 (10628): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 09:31 runpilot2-wrapper.sh
2025-07-27 23:15:17 (10628): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 09:31 queuedata.json
2025-07-27 23:15:17 (10628): Guest Log: -rwxr-xr-x. 1 atlas atlas      8894 Jul 27 18:22 init_data.xml
2025-07-27 23:15:17 (10628): Guest Log: -rwxr-xr-x. 1 atlas atlas    542893 Jul 27 18:22 input.tar.gz
2025-07-27 23:15:17 (10628): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 27 18:22 start_atlas.sh
2025-07-27 23:15:17 (10628): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 18:22 EVNT.45758745._000003.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 23:15:17 (10628): Guest Log: -rw-r--r--. 1 atlas atlas      2566 Jul 27 18:22 pandaJob.out
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 18:23 agis_schedconf.cvmfs.json
2025-07-27 23:15:17 (10628): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 18:23 pilot3
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas 178682511 Jul 27 22:14 HITS.45758747._000059.pool.root.1
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 22:14 pilot_heartbeat.json
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas      1025 Jul 27 22:14 memory_monitor_summary.json
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 22:14 agis_ddmendpoints.agis.ALL.json
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas    285028 Jul 27 22:14 log.45758747._000059.job.log.tgz.1
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas      7747 Jul 27 22:14 heartbeat.json
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 27 22:15 pilotlog.txt
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas   1183098 Jul 27 22:15 log.45758747._000059.job.log.1
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 22:15 output.list
2025-07-27 23:15:17 (10628): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 22:15 runtime_log
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas   1484800 Jul 27 22:15 result.tar.gz
2025-07-27 23:15:17 (10628): Guest Log: -rw-r--r--. 1 atlas atlas      8572 Jul 27 22:15 runtime_log.err
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas       652 Jul 27 22:15 QDLODmFuC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRvULDm3Ivz6m.diag
2025-07-27 23:15:17 (10628): Guest Log: Looking for outputfile HITS.45758747._000059.pool.root.1
2025-07-27 23:15:17 (10628): Guest Log: HITS file was successfully produced
2025-07-27 23:15:17 (10628): Guest Log: -rw-------. 1 atlas atlas 178682511 Jul 27 22:14 /home/atlas/RunAtlas/HITS.45758747._000059.pool.root.1
2025-07-27 23:15:18 (10628): Guest Log: Successfully finished the ATLAS job!
2025-07-27 23:15:18 (10628): Guest Log: Copying the results back to the shared directory!
2025-07-27 23:15:18 (10628): Guest Log:  *** Contents of shared directory: ***
2025-07-27 23:15:18 (10628): Guest Log: total 417310
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root 246589460 Jul 27 18:21 ATLAS.root_0
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root 178682511 Jul 27  2025 HITS.pool.root.1
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root      8894 Jul 27 18:21 init_data.xml
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root    542893 Jul 27 18:01 input.tar.gz
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root   1484800 Jul 27  2025 result.tar.gz
2025-07-27 23:15:18 (10628): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 18:01 start_atlas.sh
2025-07-27 23:15:18 (10628): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 23:15:18 (10628): VM Completion File Detected.
2025-07-27 23:15:18 (10628): Powering off VM.
2025-07-27 23:15:19 (10628): Successfully stopped VM.
2025-07-27 23:15:19 (10628): Deregistering VM. (boinc_0847a1884309bc3a, slot#1)
2025-07-27 23:15:19 (10628): Removing network bandwidth throttle group from VM.
2025-07-27 23:15:20 (10628): Removing VM from VirtualBox.
23:15:25 (10628): called boinc_finish(0)

</stderr_txt>
]]>

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