Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:35 (3848533): wrapper (7.7.26015): starting
14:00:35 (3848533): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 14:00:35] Arguments: --nthreads 8
[2025-07-27 14:00:35] Threads: 8
[2025-07-27 14:00:35] Checking for CVMFS
[2025-07-27 14:00:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:00:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:00:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:00:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:00:36] 2.13.1.0 681289 14478 167420 148819 1 562 21648350 40960000 13693 16776704 0 37831395 99.894 20246610 46889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:00:36] CVMFS is ok
[2025-07-27 14:00:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:00:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:00:36] Further information can be found at the LHC@home message board.
[2025-07-27 14:00:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:00:36] Checking for apptainer binary...
[2025-07-27 14:00:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:00:36] Running /usr/bin/apptainer --version
[2025-07-27 14:00:36] apptainer version 1.4.1-1.el9
[2025-07-27 14:00:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:00:36] c-212-14.aglt2.org
[2025-07-27 14:00:36] apptainer works
[2025-07-27 14:00:36] Set ATHENA_PROC_NUMBER=8
[2025-07-27 14:00:36] Set ATHENA_CORE_NUMBER=8
[2025-07-27 14:00:36] Starting ATLAS job with PandaID=6747411229
[2025-07-27 14:00:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:21:29]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:21:29]  is_tar=False
[2025-07-27 15:21:29]  lfn=log.45743349._048466.job.log.tgz.1
[2025-07-27 15:21:29]  mtime=0
[2025-07-27 15:21:29]  protocol_id=None
[2025-07-27 15:21:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:21:29]  replicas=None
[2025-07-27 15:21:29]  scope=mc23_13p6TeV
[2025-07-27 15:21:29]  status=None
[2025-07-27 15:21:29]  status_code=0
[2025-07-27 15:21:29]  storage_token=
[2025-07-27 15:21:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747411229/log.45743349._048466.job.log.tgz.1
[2025-07-27 15:21:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/d5/log.45743349._048466.job.log.tgz.1
[2025-07-27 15:21:29]  workdir=None
[2025-07-27 15:21:29] ]
[2025-07-27 15:21:29] 2025-07-27 19:20:47,594 | INFO     | transferring file log.45743349._048466.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747411229/log.45743349._048466.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:21:29] 2025-07-27 19:20:47,595 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747411229/log.45743349._048466.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._048466.job
[2025-07-27 15:21:29] 2025-07-27 19:20:47,617 | INFO     | adding to output.list: log.45743349._048466.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/d5/log.45743349._048466.job.log.tg
[2025-07-27 15:21:29] 2025-07-27 19:20:47,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:21:29] 2025-07-27 19:20:47,618 | INFO     | summary of transferred files:
[2025-07-27 15:21:29] 2025-07-27 19:20:47,618 | INFO     |  -- lfn=log.45743349._048466.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:21:29] 2025-07-27 19:20:47,619 | INFO     | stage-out finished correctly
[2025-07-27 15:21:29] 2025-07-27 19:20:48,336 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:21:29] 2025-07-27 19:20:48,418 | INFO     | job 6747411229 has state=finished
[2025-07-27 15:21:29] 2025-07-27 19:20:48,418 | INFO     | preparing for final server update for job 6747411229 in state='finished'
[2025-07-27 15:21:29] 2025-07-27 19:20:48,419 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:21:29] 2025-07-27 19:20:48,419 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:21:29] 2025-07-27 19:20:48,420 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:21:29] 2025-07-27 19:20:48,420 | INFO     | job 6747411229 has finished - writing final server update
[2025-07-27 15:21:29] 2025-07-27 19:20:48,420 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:21:29] 2025-07-27 19:20:48,421 | INFO     | executing command: lscpu
[2025-07-27 15:21:29] 2025-07-27 19:20:48,497 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:21:29] 2025-07-27 19:20:49,439 | INFO     | monitor loop #351: job 0:6747411229 is in state 'finished'
[2025-07-27 15:21:29] 2025-07-27 19:20:49,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:21:29] 2025-07-27 19:20:51,944 | INFO     | monitor loop #352: job 0:6747411229 is in state 'finished'
[2025-07-27 15:21:29] 2025-07-27 19:20:51,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:21:29] 2025-07-27 19:20:54,448 | INFO     | monitor loop #353: job 0:6747411229 is in state 'finished'
[2025-07-27 15:21:29] 2025-07-27 19:20:54,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:21:29] 2025-07-27 19:20:55,642 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:21:29] 2025-07-27 19:20:55,647 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3009.5310208333335
[2025-07-27 15:21:29] 2025-07-27 19:20:55,658 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747411229/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:21:29] 2025-07-27 19:20:55,659 | INFO     | extracted standard info from prmon json
[2025-07-27 15:21:29] 2025-07-27 19:20:55,659 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:21:29] 2025-07-27 19:20:55,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:21:29] 2025-07-27 19:20:55,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:21:29] 2025-07-27 19:20:55,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | sum of deviations: 75775084.49999997
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | mean x: 1753641744.5
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | mean y: 2537101.402777778
[2025-07-27 15:21:29] 2025-07-27 19:20:55,661 | INFO     | -- intersect: -1145815279.501584
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | intersect: -1145815279.501584
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | chi2: 0.0026373878051015897
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | -- intersect: -1145815279.501584
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | current memory leak: 0.65 B/s (using 72 data points, chi2=0.00)
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | could have reported an average CPU frequency of 3034 MHz (6 samples)
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | ..............................
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . Timing measurements:
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . get job = 0 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . initial setup = 2 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . payload setup = 6 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . stage-in = 0 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . payload execution = 4772 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . stage-out = 0 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | . log creation = 0 s
[2025-07-27 15:21:29] 2025-07-27 19:20:55,662 | INFO     | ..............................
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | 
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | job summary report
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | --------------------------------------------------
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | PanDA job id: 6747411229
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | task id: 45743349
[2025-07-27 15:21:29] 2025-07-27 19:20:56,083 | INFO     | errors: (none)
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | pilot state: finished 
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | transexitcode: 0
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | exeerrorcode: 0
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | exeerrordiag: 
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | exitcode: 0
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | exitmsg: OK
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | cpuconsumptiontime: 35600 s
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | nevents: 400
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | neventsw: 0
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | pid: 3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | pgrp: 3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:56,084 | INFO     | corecount: 8
[2025-07-27 15:21:29] 2025-07-27 19:20:56,085 | INFO     | event service: False
[2025-07-27 15:21:29] 2025-07-27 19:20:56,085 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 4782: 2423907, 4783: 2423906, 4785: 2433144, 4793: 2433282}
[2025-07-27 15:21:29] 2025-07-27 19:20:56,085 | INFO     | --------------------------------------------------
[2025-07-27 15:21:29] 2025-07-27 19:20:56,085 | INFO     | 
[2025-07-27 15:21:29] 2025-07-27 19:20:56,085 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:21:29] 2025-07-27 19:20:56,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:21:29] 2025-07-27 19:20:56,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:21:29] 2025-07-27 19:20:56,114 | INFO     | job 6747411229 has completed (purged errors)
[2025-07-27 15:21:29] 2025-07-27 19:20:56,114 | INFO     | overall cleanup function is called
[2025-07-27 15:21:29] 2025-07-27 19:20:57,123 | INFO     | --- collectZombieJob: --- 10, [3858588]
[2025-07-27 15:21:29] 2025-07-27 19:20:57,123 | INFO     | zombie collector waiting for pid 3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:57,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:21:29] 2025-07-27 19:20:57,123 | INFO     | collected zombie processes
[2025-07-27 15:21:29] 2025-07-27 19:20:57,123 | INFO     | will attempt to kill all subprocesses of pid=3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:57,531 | INFO     | process IDs to be killed: [3858588] (in reverse order)
[2025-07-27 15:21:29] 2025-07-27 19:20:57,652 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:21:29] 2025-07-27 19:20:57,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:21:29] 2025-07-27 19:20:57,666 | INFO     | did not find any defunct processes belonging to 3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:57,679 | INFO     | did not find any defunct processes belonging to 3858588
[2025-07-27 15:21:29] 2025-07-27 19:20:57,679 | INFO     | ready for new job
[2025-07-27 15:21:29] 2025-07-27 19:20:57,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:21:29] 2025-07-27 19:20:57,681 | INFO     | ***************************************
[2025-07-27 15:21:29] 2025-07-27 19:20:57,682 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:21:29] 2025-07-27 19:20:57,682 | INFO     | ***************************************
[2025-07-27 15:21:29] 2025-07-27 19:20:57,682 | INFO     | 
[2025-07-27 15:21:29] 2025-07-27 19:20:57,687 | INFO     | architecture information:
[2025-07-27 15:21:29] 2025-07-27 19:20:57,688 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:21:29] 2025-07-27 19:20:57,709 | INFO     | cat /etc/os-release:
[2025-07-27 15:21:29] NAME="CentOS Linux"
[2025-07-27 15:21:29] VERSION="7 (Core)"
[2025-07-27 15:21:29] ID="centos"
[2025-07-27 15:21:29] ID_LIKE="rhel fedora"
[2025-07-27 15:21:29] VERSION_ID="7"
[2025-07-27 15:21:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:21:29] ANSI_COLOR="0;31"
[2025-07-27 15:21:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:21:29] HOME_URL="https://www.centos.org/"
[2025-07-27 15:21:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:21:29] 
[2025-07-27 15:21:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:21:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:21:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:21:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:21:29] 
[2025-07-27 15:21:29] 2025-07-27 19:20:57,709 | INFO     | ***************************************
[2025-07-27 15:21:29] 2025-07-27 19:20:58,211 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:21:29] 2025-07-27 19:20:58,229 | INFO     | sufficient remaining disk space (128977993728 B)
[2025-07-27 15:21:29] 2025-07-27 19:20:58,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:21:29] 2025-07-27 19:20:58,229 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:21:29] 2025-07-27 19:20:58,229 | INFO     | update_server=False
[2025-07-27 15:21:29] 2025-07-27 19:20:58,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:21:29] 2025-07-27 19:20:58,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:21:29] 2025-07-27 19:20:58,230 | INFO     | aborting loop
[2025-07-27 15:21:29] 2025-07-27 19:20:58,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:21:29] 2025-07-27 19:20:58,564 | INFO     | all job control threads have been joined
[2025-07-27 15:21:29] 2025-07-27 19:20:58,802 | INFO     | all payload control threads have been joined
[2025-07-27 15:21:29] 2025-07-27 19:20:58,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:21:29] 2025-07-27 19:20:59,235 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,236 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,236 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,317 | INFO     | all data control threads have been joined
[2025-07-27 15:21:29] 2025-07-27 19:20:59,317 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,438 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,569 | INFO     | [job] control thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,809 | INFO     | [payload] control thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:20:59,947 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,109 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,237 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,323 | INFO     | [data] control thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,423 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,508 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,598 | INFO     | [job] validate thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:00,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:21:29] 2025-07-27 19:21:01,743 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:02,943 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:21:29] 2025-07-27 19:21:03,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863364982592)>', '<ExcThread(monitor, started 139862648809216)>']
[2025-07-27 15:21:29] 2025-07-27 19:21:08,353 | INFO     | all workflow threads have been joined
[2025-07-27 15:21:29] 2025-07-27 19:21:08,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:21:29] 2025-07-27 19:21:08,354 | INFO     | traces error code: 0
[2025-07-27 15:21:29] 2025-07-27 19:21:08,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:21:29] 2025-07-27 19:21:29,576 | INFO     | PID=3852163 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:21:29] 2025-07-27 19:21:29,578 | INFO     | .. there are 15 such processes running
[2025-07-27 15:21:29] 2025-07-27 19:21:29,579 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:21:29] 2025-07-27 19:21:29,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:21:29] 2025-07-27 19:21:29,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:21:29] 2025-07-27 19:21:29,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:21:29] 2025-07-27 19:21:29,580 | INFO     | [monitor] control thread has ended
[2025-07-27 15:21:29] 2025-07-27 19:21:29,676 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:21:29] 2025-07-27 19:21:29,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:21:29] 2025-07-27 19:21:29,686 [wrapper] pilotpid: 3852163
[2025-07-27 15:21:29] 2025-07-27 19:21:29,692 [wrapper] Pilot exit status: 0
[2025-07-27 15:21:29] 2025-07-27 19:21:29,714 [wrapper] pandaids: 6747411229
[2025-07-27 15:21:29] 2025-07-27 19:21:29,806 [wrapper] cleanup supervisor_pilot 4030531 3852164
[2025-07-27 15:21:29] 2025-07-27 19:21:29,812 [wrapper] Test setup, not cleaning
[2025-07-27 15:21:29] 2025-07-27 19:21:29,818 [wrapper] apfmon messages muted
[2025-07-27 15:21:29] 2025-07-27 19:21:29,823 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:21:29] 2025-07-27 19:21:29,827 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:21:29]  *** Error codes and diagnostics ***
[2025-07-27 15:21:29]     "exeErrorCode": 0,
[2025-07-27 15:21:29]     "exeErrorDiag": "",
[2025-07-27 15:21:29]     "pilotErrorCode": 0,
[2025-07-27 15:21:29]     "pilotErrorDiag": "",
[2025-07-27 15:21:29]  *** Listing of results directory ***
[2025-07-27 15:21:29] total 351808
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 15:21:29] -rwx------. 1 boincer umatlas     36292 Jul 27 08:32 runpilot2-wrapper.sh
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 08:32 queuedata.json
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:21:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:00 run_atlas
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:00 job.xml
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas 146052687 Jul 27 14:00 EVNT.45743347._002687.pool.root.1
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:00 start_atlas.sh
[2025-07-27 15:21:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:00 shared
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 14:00 input.tar.gz
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:00 boinc_lockfile
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 14:00 pandaJob.out
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas    980117 Jul 27 14:00 agis_schedconf.cvmfs.json
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:21:29] drwx------. 4 boincer umatlas      4096 Jul 27 14:00 pilot3
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas 208786029 Jul 27 15:20 HITS.45743349._048466.pool.root.1
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:20 boinc_task_state.xml
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas      1033 Jul 27 15:20 memory_monitor_summary.json
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas    298498 Jul 27 15:20 log.45743349._048466.job.log.tgz.1
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas      7766 Jul 27 15:20 heartbeat.json
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 15:21 init_data.xml
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:21 wrapper_checkpoint.txt
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:21 boinc_mmap_file
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas        95 Jul 27 15:21 pilot_heartbeat.json
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas       823 Jul 27 15:21 pilotlog.txt
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas    468818 Jul 27 15:21 log.45743349._048466.job.log.1
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas       357 Jul 27 15:21 output.list
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:21 runtime_log
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas    788480 Jul 27 15:21 result.tar.gz
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 15:21 runtime_log.err
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas       652 Jul 27 15:21 IQjNDmOjF07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqGVLDmJC7Nnn.diag
[2025-07-27 15:21:29] -rw-r--r--. 1 boincer umatlas     21615 Jul 27 15:21 stderr.txt
[2025-07-27 15:21:29] HITS file was successfully produced:
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas 208786029 Jul 27 15:20 shared/HITS.pool.root.1
[2025-07-27 15:21:29]  *** Contents of shared directory: ***
[2025-07-27 15:21:29] total 347852
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas 146052687 Jul 27 14:00 ATLAS.root_0
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:00 start_atlas.sh
[2025-07-27 15:21:29] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 14:00 input.tar.gz
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas 208786029 Jul 27 15:20 HITS.pool.root.1
[2025-07-27 15:21:29] -rw-------. 1 boincer umatlas    788480 Jul 27 15:21 result.tar.gz
15:21:31 (3848533): run_atlas exited; CPU time 35709.197769
15:21:31 (3848533): called boinc_finish(0)

</stderr_txt>
]]>

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