Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 20:40:10 (193482): Detected: vboxwrapper 26206
2025-07-27 20:40:10 (193482): Detected: BOINC client v8.0.4
2025-07-27 20:40:10 (193482): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-07-27 20:40:10 (193482): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 20:40:10 (193482): Create VM. (boinc_234b516a42bc0f15, slot#0)
2025-07-27 20:40:10 (193482): Setting Memory Size for VM. (4800MB)
2025-07-27 20:40:11 (193482): Setting CPU Count for VM. (8)
2025-07-27 20:40:11 (193482): Setting Chipset Options for VM.
2025-07-27 20:40:11 (193482): Setting Graphics Controller Options for VM.
2025-07-27 20:40:11 (193482): Setting Boot Options for VM.
2025-07-27 20:40:11 (193482): Setting Network Configuration for NAT.
2025-07-27 20:40:11 (193482): Enabling VM Network Access.
2025-07-27 20:40:11 (193482): Disabling USB Support for VM.
2025-07-27 20:40:11 (193482): Disabling COM Port Support for VM.
2025-07-27 20:40:11 (193482): Disabling LPT Port Support for VM.
2025-07-27 20:40:11 (193482): Disabling Audio Support for VM.
2025-07-27 20:40:11 (193482): Disabling Clipboard Support for VM.
2025-07-27 20:40:12 (193482): Disabling Drag and Drop Support for VM.
2025-07-27 20:40:12 (193482): Adding storage controller(s) to VM.
2025-07-27 20:40:12 (193482): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 20:40:12 (193482): Adding VirtualBox Guest Additions to VM.
2025-07-27 20:40:12 (193482): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 20:40:12 (193482): forwarding host port 43027 to guest port 80
2025-07-27 20:40:12 (193482): Enabling remote desktop for VM.
2025-07-27 20:40:12 (193482): Required extension pack not installed, remote desktop not enabled.
2025-07-27 20:40:12 (193482): Enabling shared directory for VM.
2025-07-27 20:40:12 (193482): Starting VM using VBoxManage interface. (boinc_234b516a42bc0f15, slot#0)
2025-07-27 20:40:14 (193482): Successfully started VM. (PID = '193984')
2025-07-27 20:40:14 (193482): Reporting VM Process ID to BOINC.
2025-07-27 20:40:14 (193482): Guest Log: BIOS: VirtualBox 7.1.6
2025-07-27 20:40:14 (193482): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 20:40:14 (193482): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 20:40:14 (193482): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 20:40:14 (193482): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 20:40:14 (193482): Detected: Web Application Enabled (http://localhost:43027)
2025-07-27 20:40:14 (193482): Preference change detected
2025-07-27 20:40:14 (193482): Setting CPU throttle for VM. (100%)
2025-07-27 20:40:14 (193482): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 20:40:16 (193482): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 20:40:16 (193482): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 20:40:19 (193482): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 20:40:19 (193482): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 20:40:19 (193482): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 20:40:25 (193482): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 20:40:25 (193482): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 20:40:30 (193482): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000183 main     Log opened 2025-07-27T18:40:29.536431000Z
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000292 main     OS Product: Linux
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000320 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000344 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000363 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000363 main     Process ID: 1372
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.000364 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 20:40:30 (193482): Guest Log: 00:00:00.001163 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 20:40:30 (193482): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 20:40:30 (193482): Guest Log: [INFO] Mounting shared directory
2025-07-27 20:40:30 (193482): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 20:40:32 (193482): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 20:40:32 (193482): Guest Log: [INFO] Detected branch: prod
2025-07-27 20:40:32 (193482): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 20:40:32 (193482): Guest Log: Copying input files
2025-07-27 20:40:33 (193482): Guest Log: Copied input files into RunAtlas.
2025-07-27 20:40:33 (193482): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 20:40:33 (193482): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 20:40:33 (193482): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 20:40:33 (193482): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 20:40:41 (193482): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 20:40:42 (193482): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 20:40:42 (193482): Guest Log: 2.6.3.0 1648 0 32212 148821 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 20:40:42 (193482): Guest Log: copied the webapp to /var/www
2025-07-27 20:40:42 (193482): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-27 20:40:42 (193482): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-27 20:40:43 (193482): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 20:40:43 (193482): Guest Log:  *** Starting ATLAS job. (PandaID=6747411195 taskID=45743349) ***
2025-07-27 22:10:56 (193482): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 22:11:17 (193482): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 22:19:36 (193482): Status Report: Elapsed Time: '6000.000000'
2025-07-27 22:19:36 (193482): Status Report: CPU Time: '45119.090000'
2025-07-27 22:24:35 (193482): Guest Log:  *** Job finished ***
2025-07-27 22:24:35 (193482): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:23:58,709 | INFO     | [data] queue_monitor thread has finished
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:03,522 | INFO     | job.realtimelogging is not enabled
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:04,524 | INFO     | [payload] run_realtimelog thread has finished
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:05,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434528229184)>', '<ExcThread(monitor, started 140433812350720)>']
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:05,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:05,553 | INFO     | [monitor] control thread has ended
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,348 | INFO     | all workflow threads have been joined
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,349 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,349 | INFO     | traces error code: 0
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,454 [wrapper] ==== pilot stdout END ====
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,461 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,467 [wrapper] pilotpid: 6003
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,474 [wrapper] Pilot exit status: 0
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,531 [wrapper] pandaids: 6747411195
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,577 [wrapper] cleanup supervisor_pilot  2254 6004
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,591 [wrapper] Test setup, not cleaning
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,598 [wrapper] apfmon messages muted
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,604 [wrapper] ==== wrapper stdout END ====
2025-07-27 22:24:35 (193482): Guest Log: 2025-07-27 20:24:10,610 [wrapper] ==== wrapper stderr END ====
2025-07-27 22:24:35 (193482): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 22:24:35 (193482): Guest Log:     "exeErrorCode": 0,
2025-07-27 22:24:35 (193482): Guest Log:     "exeErrorDiag": "",
2025-07-27 22:24:35 (193482): Guest Log:     "pilotErrorCode": 0,
2025-07-27 22:24:35 (193482): Guest Log:     "pilotErrorDiag": "",
2025-07-27 22:24:35 (193482): Guest Log:  *** Listing of results directory ***
2025-07-27 22:24:35 (193482): Guest Log: total 210120
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 11:59 pilot3.tar.gz
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 12:31 queuedata.json
2025-07-27 22:24:35 (193482): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 12:32 runpilot2-wrapper.sh
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 27 18:40 start_atlas.sh
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas      6756 Jul 27 18:40 init_data.xml
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas    542898 Jul 27 18:40 input.tar.gz
2025-07-27 22:24:35 (193482): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 18:40 EVNT.45743347._002685.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 18:40 pandaJob.out
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 18:41 agis_schedconf.cvmfs.json
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 18:41 agis_ddmendpoints.agis.ALL.json
2025-07-27 22:24:35 (193482): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 18:41 pilot3
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas 209670307 Jul 27 20:23 HITS.45743349._048436.pool.root.1
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 20:23 pilot_heartbeat.json
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas      1027 Jul 27 20:23 memory_monitor_summary.json
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas    303940 Jul 27 20:23 log.45743349._048436.job.log.tgz.1
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas      7778 Jul 27 20:23 heartbeat.json
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 27 20:24 pilotlog.txt
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas    540147 Jul 27 20:24 log.45743349._048436.job.log.1
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 20:24 output.list
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 20:24 runtime_log
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas    860160 Jul 27 20:24 result.tar.gz
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 atlas atlas      8619 Jul 27 20:24 runtime_log.err
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas       664 Jul 27 20:24 fHSNDm4iF07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOGVLDmsicTDo.diag
2025-07-27 22:24:35 (193482): Guest Log: Looking for outputfile HITS.45743349._048436.pool.root.1
2025-07-27 22:24:35 (193482): Guest Log: HITS file was successfully produced
2025-07-27 22:24:35 (193482): Guest Log: -rw-------. 1 atlas atlas 209670307 Jul 27 20:23 /home/atlas/RunAtlas/HITS.45743349._048436.pool.root.1
2025-07-27 22:24:35 (193482): Guest Log: Successfully finished the ATLAS job!
2025-07-27 22:24:35 (193482): Guest Log: Copying the results back to the shared directory!
2025-07-27 22:24:35 (193482): Guest Log:  *** Contents of shared directory: ***
2025-07-27 22:24:35 (193482): Guest Log: total 144156
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 root root 146185543 Jul 27 18:40 ATLAS.root_0
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 root root      6756 Jul 27 18:40 init_data.xml
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 root root    542898 Jul 27 18:40 input.tar.gz
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 root root    860160 Jul 27  2025 result.tar.gz
2025-07-27 22:24:35 (193482): Guest Log: -rw-r--r--. 1 root root     15095 Jul 27 18:40 start_atlas.sh
2025-07-27 22:24:35 (193482): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 22:24:35 (193482): VM Completion File Detected.
2025-07-27 22:24:35 (193482): Powering off VM.
2025-07-27 22:24:35 (193482): Successfully stopped VM.
2025-07-27 22:24:35 (193482): Deregistering VM. (boinc_234b516a42bc0f15, slot#0)
2025-07-27 22:24:35 (193482): Removing network bandwidth throttle group from VM.
2025-07-27 22:24:36 (193482): Removing VM from VirtualBox.
22:24:41 (193482): called boinc_finish(0)

</stderr_txt>
]]>

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