Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:55:48 (421526): wrapper (7.7.26015): starting
14:55:48 (421526): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 14:55:48] Arguments: --nthreads 12
[2025-07-27 14:55:48] Threads: 12
[2025-07-27 14:55:48] Checking for CVMFS
[2025-07-27 14:55:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:55:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:55:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:55:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:55:48] 2.13.0.0 3229734 18751 351564 148821 1 436 27514159 40960001 11079 16776704 0 59855966 99.842 46706589 27902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 14:55:48] CVMFS is ok
[2025-07-27 14:55:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:55:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:55:48] Further information can be found at the LHC@home message board.
[2025-07-27 14:55:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:55:48] Checking for apptainer binary...
[2025-07-27 14:55:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:55:48] Running /usr/bin/apptainer --version
[2025-07-27 14:55:48] apptainer version 1.4.1-1.el9
[2025-07-27 14:55:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:55:48] c6-5-7-4.aglt2.org
[2025-07-27 14:55:48] apptainer works
[2025-07-27 14:55:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 14:55:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 14:55:49] Starting ATLAS job with PandaID=6747177641
[2025-07-27 14:55:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:07:52]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:07:52]  mtime=0
[2025-07-27 16:07:52]  protocol_id=None
[2025-07-27 16:07:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:07:52]  replicas=None
[2025-07-27 16:07:52]  scope=mc23_13p6TeV
[2025-07-27 16:07:52]  status=None
[2025-07-27 16:07:52]  status_code=0
[2025-07-27 16:07:52]  storage_token=
[2025-07-27 16:07:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747177641/log.45758341._000057.job.log.tgz.1
[2025-07-27 16:07:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/29/log.45758341._000057.job.log.tgz.1
[2025-07-27 16:07:52]  workdir=None
[2025-07-27 16:07:52] ]
[2025-07-27 16:07:52] 2025-07-27 20:07:12,946 | INFO     | transferring file log.45758341._000057.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747177641/log.45758341._000057.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:07:52] 2025-07-27 20:07:12,946 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747177641/log.45758341._000057.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758341._000057.job
[2025-07-27 16:07:52] 2025-07-27 20:07:12,968 | INFO     | adding to output.list: log.45758341._000057.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/29/log.45758341._000057.job.log.tg
[2025-07-27 16:07:52] 2025-07-27 20:07:12,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:07:52] 2025-07-27 20:07:12,969 | INFO     | summary of transferred files:
[2025-07-27 16:07:52] 2025-07-27 20:07:12,969 | INFO     |  -- lfn=log.45758341._000057.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:07:52] 2025-07-27 20:07:12,970 | INFO     | stage-out finished correctly
[2025-07-27 16:07:52] 2025-07-27 20:07:13,069 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:07:52] 2025-07-27 20:07:14,964 | INFO     | job 6747177641 has state=finished
[2025-07-27 16:07:52] 2025-07-27 20:07:14,964 | INFO     | preparing for final server update for job 6747177641 in state='finished'
[2025-07-27 16:07:52] 2025-07-27 20:07:14,965 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:07:52] 2025-07-27 20:07:14,965 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:07:52] 2025-07-27 20:07:14,965 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:07:52] 2025-07-27 20:07:14,965 | INFO     | job 6747177641 has finished - writing final server update
[2025-07-27 16:07:52] 2025-07-27 20:07:14,966 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:07:52] 2025-07-27 20:07:14,967 | INFO     | executing command: lscpu
[2025-07-27 16:07:52] 2025-07-27 20:07:15,016 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:07:52] 2025-07-27 20:07:16,361 | WARNING  | process 433479 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 16:07:52] 2025-07-27 20:07:16,361 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747177641/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:07:52] 2025-07-27 20:07:16,625 | INFO     | number of running child processes to parent process 433479: 1
[2025-07-27 16:07:52] 2025-07-27 20:07:16,626 | INFO     | maximum number of monitored processes: 6
[2025-07-27 16:07:52] 2025-07-27 20:07:19,128 | INFO     | monitor loop #317: job 0:6747177641 is in state 'finished'
[2025-07-27 16:07:52] 2025-07-27 20:07:19,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,021 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:07:52] 2025-07-27 20:07:20,029 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2809.426089285715
[2025-07-27 16:07:52] 2025-07-27 20:07:20,038 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747177641/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,039 | INFO     | extracted standard info from prmon json
[2025-07-27 16:07:52] 2025-07-27 20:07:20,039 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:07:52] 2025-07-27 20:07:20,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:07:52] 2025-07-27 20:07:20,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:07:52] 2025-07-27 20:07:20,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:07:52] 2025-07-27 20:07:20,041 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:07:52] 2025-07-27 20:07:20,041 | INFO     | sum of square deviations: 77515872.0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,041 | INFO     | sum of deviations: -6562015281.0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,041 | INFO     | mean x: 1753644788.0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | mean y: 2833122.634920635
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | -- intersect: 148455577049.7368
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | intersect: 148455577049.7368
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | chi2: 0.10424482921989515
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | -- intersect: 148455577049.7368
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | current memory leak: -84.65 B/s (using 63 data points, chi2=0.10)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | could have reported an average CPU frequency of 2807 MHz (6 samples)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | ..............................
[2025-07-27 16:07:52] 2025-07-27 20:07:20,042 | INFO     | . Timing measurements:
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . get job = 0 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . initial setup = 2 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . payload setup = 8 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . stage-in = 0 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . payload execution = 4242 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . stage-out = 0 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | . log creation = 0 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,043 | INFO     | ..............................
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | 
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | job summary report
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | --------------------------------------------------
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | PanDA job id: 6747177641
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | task id: 45758341
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | errors: (none)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | pilot state: finished 
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | transexitcode: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | exeerrorcode: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,127 | INFO     | exeerrordiag: 
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | exitcode: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | exitmsg: OK
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | cpuconsumptiontime: 46344 s
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | nevents: 400
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | neventsw: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | pid: 433479
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | pgrp: 433479
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | corecount: 12
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | event service: False
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | sizes: {0: 2397462, 5: 2397724, 11: 2397780, 4254: 2423642, 4255: 2432696, 4262: 2432834}
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | --------------------------------------------------
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | 
[2025-07-27 16:07:52] 2025-07-27 20:07:20,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:07:52] 2025-07-27 20:07:20,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:07:52] 2025-07-27 20:07:20,160 | INFO     | job 6747177641 has completed (purged errors)
[2025-07-27 16:07:52] 2025-07-27 20:07:20,160 | INFO     | overall cleanup function is called
[2025-07-27 16:07:52] 2025-07-27 20:07:21,169 | INFO     | --- collectZombieJob: --- 10, [433479]
[2025-07-27 16:07:52] 2025-07-27 20:07:21,170 | INFO     | zombie collector waiting for pid 433479
[2025-07-27 16:07:52] 2025-07-27 20:07:21,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:07:52] 2025-07-27 20:07:21,170 | INFO     | collected zombie processes
[2025-07-27 16:07:52] 2025-07-27 20:07:21,170 | INFO     | will attempt to kill all subprocesses of pid=433479
[2025-07-27 16:07:52] 2025-07-27 20:07:21,416 | INFO     | process IDs to be killed: [433479] (in reverse order)
[2025-07-27 16:07:52] 2025-07-27 20:07:21,534 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:07:52] 2025-07-27 20:07:21,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:07:52] 2025-07-27 20:07:21,546 | INFO     | did not find any defunct processes belonging to 433479
[2025-07-27 16:07:52] 2025-07-27 20:07:21,556 | INFO     | did not find any defunct processes belonging to 433479
[2025-07-27 16:07:52] 2025-07-27 20:07:21,556 | INFO     | ready for new job
[2025-07-27 16:07:52] 2025-07-27 20:07:21,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:07:52] 2025-07-27 20:07:21,558 | INFO     | ***************************************
[2025-07-27 16:07:52] 2025-07-27 20:07:21,559 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:07:52] 2025-07-27 20:07:21,559 | INFO     | ***************************************
[2025-07-27 16:07:52] 2025-07-27 20:07:21,559 | INFO     | 
[2025-07-27 16:07:52] 2025-07-27 20:07:21,561 | INFO     | architecture information:
[2025-07-27 16:07:52] 2025-07-27 20:07:21,561 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:07:52] 2025-07-27 20:07:21,577 | INFO     | cat /etc/os-release:
[2025-07-27 16:07:52] NAME="CentOS Linux"
[2025-07-27 16:07:52] VERSION="7 (Core)"
[2025-07-27 16:07:52] ID="centos"
[2025-07-27 16:07:52] ID_LIKE="rhel fedora"
[2025-07-27 16:07:52] VERSION_ID="7"
[2025-07-27 16:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:07:52] ANSI_COLOR="0;31"
[2025-07-27 16:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:07:52] HOME_URL="https://www.centos.org/"
[2025-07-27 16:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:07:52] 
[2025-07-27 16:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:07:52] 
[2025-07-27 16:07:52] 2025-07-27 20:07:21,577 | INFO     | ***************************************
[2025-07-27 16:07:52] 2025-07-27 20:07:22,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:07:52] 2025-07-27 20:07:22,101 | INFO     | sufficient remaining disk space (75274125312 B)
[2025-07-27 16:07:52] 2025-07-27 20:07:22,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:07:52] 2025-07-27 20:07:22,101 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:07:52] 2025-07-27 20:07:22,101 | INFO     | update_server=False
[2025-07-27 16:07:52] 2025-07-27 20:07:22,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:07:52] 2025-07-27 20:07:22,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:07:52] 2025-07-27 20:07:22,293 | INFO     | all data control threads have been joined
[2025-07-27 16:07:52] 2025-07-27 20:07:22,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:07:52] 2025-07-27 20:07:22,636 | INFO     | aborting loop
[2025-07-27 16:07:52] 2025-07-27 20:07:23,104 | INFO     | all payload control threads have been joined
[2025-07-27 16:07:52] 2025-07-27 20:07:23,106 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,107 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,166 | INFO     | [job] validate thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,298 | INFO     | [data] control thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,441 | INFO     | all job control threads have been joined
[2025-07-27 16:07:52] 2025-07-27 20:07:23,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:07:52] 2025-07-27 20:07:23,642 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:07:52] 2025-07-27 20:07:23,666 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,679 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,741 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:23,948 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:24,110 | INFO     | [payload] control thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:24,201 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:24,446 | INFO     | [job] control thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:24,453 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:25,594 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:27,667 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:32,904 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:07:52] 2025-07-27 20:07:33,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:07:52] 2025-07-27 20:07:34,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139927152748352)>', '<ExcThread(monitor, started 139926494484224)>']
[2025-07-27 16:07:52] 2025-07-27 20:07:39,067 | INFO     | all workflow threads have been joined
[2025-07-27 16:07:52] 2025-07-27 20:07:39,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:07:52] 2025-07-27 20:07:39,067 | INFO     | traces error code: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:39,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:07:52] 2025-07-27 20:07:51,812 | INFO     | PID=425110 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 16:07:52] 2025-07-27 20:07:51,813 | INFO     | .. there are 14 such processes running
[2025-07-27 16:07:52] 2025-07-27 20:07:51,813 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:07:52] 2025-07-27 20:07:51,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:07:52] 2025-07-27 20:07:51,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:07:52] 2025-07-27 20:07:51,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:07:52] 2025-07-27 20:07:51,814 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 16:07:52] 2025-07-27 20:07:51,814 | INFO     | [monitor] control thread has ended
[2025-07-27 16:07:52] 2025-07-27 20:07:52,001 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:07:52] 2025-07-27 20:07:52,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:07:52] 2025-07-27 20:07:52,007 [wrapper] pilotpid: 425110
[2025-07-27 16:07:52] 2025-07-27 20:07:52,009 [wrapper] Pilot exit status: 0
[2025-07-27 16:07:52] 2025-07-27 20:07:52,025 [wrapper] pandaids: 6747177641
[2025-07-27 16:07:52] 2025-07-27 20:07:52,095 [wrapper] cleanup supervisor_pilot  564908 425111
[2025-07-27 16:07:52] 2025-07-27 20:07:52,099 [wrapper] Test setup, not cleaning
[2025-07-27 16:07:52] 2025-07-27 20:07:52,104 [wrapper] apfmon messages muted
[2025-07-27 16:07:52] 2025-07-27 20:07:52,107 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:07:52] 2025-07-27 20:07:52,109 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:07:52]  *** Error codes and diagnostics ***
[2025-07-27 16:07:52]     "exeErrorCode": 0,
[2025-07-27 16:07:52]     "exeErrorDiag": "",
[2025-07-27 16:07:52]     "pilotErrorCode": 0,
[2025-07-27 16:07:52]     "pilotErrorDiag": "",
[2025-07-27 16:07:52]  *** Listing of results directory ***
[2025-07-27 16:07:52] total 414660
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 05:59 queuedata.json
[2025-07-27 16:07:52] -rwx------. 1 boincer umatlas     36292 Jul 27 06:00 runpilot2-wrapper.sh
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:07:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:55 run_atlas
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:55 job.xml
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas 245517773 Jul 27 14:55 EVNT.45758338._000003.pool.root.1
[2025-07-27 16:07:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:55 shared
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 14:55 input.tar.gz
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:55 start_atlas.sh
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:55 boinc_lockfile
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas      2555 Jul 27 14:55 pandaJob.out
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas    980125 Jul 27 14:55 agis_schedconf.cvmfs.json
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:56 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:07:52] drwx------. 4 boincer umatlas      4096 Jul 27 14:56 pilot3
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 16:02 init_data.xml
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas 173658271 Jul 27 16:06 HITS.45758341._000057.pool.root.1
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas       529 Jul 27 16:06 boinc_task_state.xml
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas      1035 Jul 27 16:07 memory_monitor_summary.json
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas    353712 Jul 27 16:07 log.45758341._000057.job.log.tgz.1
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas      7808 Jul 27 16:07 heartbeat.json
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:07 wrapper_checkpoint.txt
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas       892 Jul 27 16:07 pilotlog.txt
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas        95 Jul 27 16:07 pilot_heartbeat.json
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:07 boinc_mmap_file
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas    429135 Jul 27 16:07 log.45758341._000057.job.log.1
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas       357 Jul 27 16:07 output.list
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:07 runtime_log
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas    798720 Jul 27 16:07 result.tar.gz
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas       653 Jul 27 16:07 xN2LDmLMD07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8xULDmaS5sNn.diag
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 16:07 runtime_log.err
[2025-07-27 16:07:52] -rw-r--r--. 1 boincer umatlas     21665 Jul 27 16:07 stderr.txt
[2025-07-27 16:07:52] HITS file was successfully produced:
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas 173658271 Jul 27 16:06 shared/HITS.pool.root.1
[2025-07-27 16:07:52]  *** Contents of shared directory: ***
[2025-07-27 16:07:52] total 410688
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas 245517773 Jul 27 14:55 ATLAS.root_0
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 14:55 input.tar.gz
[2025-07-27 16:07:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:55 start_atlas.sh
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas 173658271 Jul 27 16:06 HITS.pool.root.1
[2025-07-27 16:07:52] -rw-------. 1 boincer umatlas    798720 Jul 27 16:07 result.tar.gz
16:08:13 (421526): run_atlas exited; CPU time 46388.000583
16:08:13 (421526): called boinc_finish(0)

</stderr_txt>
]]>

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