Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:28 (7993): wrapper (7.7.26015): starting
13:28:28 (7993): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 13:28:28] Arguments: --nthreads 8
[2025-07-28 13:28:28] Threads: 8
[2025-07-28 13:28:28] Checking for CVMFS
[2025-07-28 13:28:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:28:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:28:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:28:30] 2.11.2.0 16655 110908 138460 148845 0 161 21523925 25165825 4360 130560 0 78035212 99.854 47602652 3130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 13:28:30] CVMFS is ok
[2025-07-28 13:28:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:28:30] Checking for apptainer binary...
[2025-07-28 13:28:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:28:30] Running /usr/bin/apptainer --version
[2025-07-28 13:28:30] apptainer version 1.3.2-1.el7
[2025-07-28 13:28:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:28:31] cg-vwn423.simple-grid.lan
[2025-07-28 13:28:31] apptainer works
[2025-07-28 13:28:31] Set ATHENA_PROC_NUMBER=8
[2025-07-28 13:28:31] Set ATHENA_CORE_NUMBER=8
[2025-07-28 13:28:31] Starting ATLAS job with PandaID=6747411015
[2025-07-28 13:28:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 18:26:01]  *** The last 200 lines of the pilot log: ***
[2025-07-28 18:26:01] 2025-07-28 15:47:40,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 18:26:01] 2025-07-28 15:47:40,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 18:26:01] 2025-07-28 15:47:40,018 | INFO     | fitting pss+swap vs Time
[2025-07-28 18:26:01] 2025-07-28 15:47:40,018 | INFO     | sum of square deviations: 4962187923.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,025 | INFO     | sum of deviations: 38318718249.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,025 | INFO     | mean x: 1753709845.5
[2025-07-28 18:26:01] 2025-07-28 15:47:40,025 | INFO     | mean y: 2470308.6587301586
[2025-07-28 18:26:01] 2025-07-28 15:47:40,025 | INFO     | -- intersect: -13539925606.807655
[2025-07-28 18:26:01] 2025-07-28 15:47:40,026 | INFO     | intersect: -13539925606.807655
[2025-07-28 18:26:01] 2025-07-28 15:47:40,026 | INFO     | chi2: 2.7416541103714644
[2025-07-28 18:26:01] 2025-07-28 15:47:40,027 | INFO     | sum of square deviations: 4672638308.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,029 | INFO     | sum of deviations: 54673804802.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,029 | INFO     | mean x: 1753709693.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,029 | INFO     | mean y: 2478775.696356275
[2025-07-28 18:26:01] 2025-07-28 15:47:40,029 | INFO     | -- intersect: -20517402095.523293
[2025-07-28 18:26:01] 2025-07-28 15:47:40,030 | INFO     | intersect: -20517402095.523293
[2025-07-28 18:26:01] 2025-07-28 15:47:40,030 | INFO     | chi2: 1.9135760431572078
[2025-07-28 18:26:01] 2025-07-28 15:47:40,030 | INFO     | current chi2=1.9135760431572078 (change=30.20359366565249 %)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,031 | INFO     | sum of square deviations: 4394577280.5
[2025-07-28 18:26:01] 2025-07-28 15:47:40,033 | INFO     | sum of deviations: 53380167188.00001
[2025-07-28 18:26:01] 2025-07-28 15:47:40,033 | INFO     | mean x: 1753709540.5
[2025-07-28 18:26:01] 2025-07-28 15:47:40,033 | INFO     | mean y: 2478066.123966942
[2025-07-28 18:26:01] 2025-07-28 15:47:40,033 | INFO     | -- intersect: -21299527222.6372
[2025-07-28 18:26:01] 2025-07-28 15:47:40,033 | INFO     | intersect: -21299527222.6372
[2025-07-28 18:26:01] 2025-07-28 15:47:40,034 | INFO     | chi2: 1.9143169327703886
[2025-07-28 18:26:01] 2025-07-28 15:47:40,034 | INFO     | current chi2=1.9143169327703886 (change=-0.03871754225969868 %)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,034 | INFO     | right removable region: 241
[2025-07-28 18:26:01] 2025-07-28 15:47:40,034 | INFO     | sum of square deviations: 4672638308.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,036 | INFO     | sum of deviations: -12760120788.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,036 | INFO     | mean x: 1753709998.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,037 | INFO     | mean y: 2497069.4331983807
[2025-07-28 18:26:01] 2025-07-28 15:47:40,037 | INFO     | -- intersect: 4791558393.373198
[2025-07-28 18:26:01] 2025-07-28 15:47:40,037 | INFO     | intersect: 4791558393.373198
[2025-07-28 18:26:01] 2025-07-28 15:47:40,037 | INFO     | chi2: 0.9112464938914748
[2025-07-28 18:26:01] 2025-07-28 15:47:40,037 | INFO     | current chi2=0.9112464938914748 (change=66.76289359608492 %)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,038 | INFO     | sum of square deviations: 4394577280.5
[2025-07-28 18:26:01] 2025-07-28 15:47:40,040 | INFO     | sum of deviations: -20094246314.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,040 | INFO     | mean x: 1753710150.5
[2025-07-28 18:26:01] 2025-07-28 15:47:40,040 | INFO     | mean y: 2501062.876033058
[2025-07-28 18:26:01] 2025-07-28 15:47:40,040 | INFO     | -- intersect: 8021357366.502028
[2025-07-28 18:26:01] 2025-07-28 15:47:40,040 | INFO     | intersect: 8021357366.502028
[2025-07-28 18:26:01] 2025-07-28 15:47:40,041 | INFO     | chi2: 0.8623639123264467
[2025-07-28 18:26:01] 2025-07-28 15:47:40,041 | INFO     | current chi2=0.8623639123264467 (change=5.364364295798301 %)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,041 | INFO     | left removable region: 20
[2025-07-28 18:26:01] 2025-07-28 15:47:40,042 | INFO     | sum of square deviations: 3346927870.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,048 | INFO     | sum of deviations: -2207033009.0000005
[2025-07-28 18:26:01] 2025-07-28 15:47:40,048 | INFO     | mean x: 1753710120.0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,048 | INFO     | mean y: 2509716.8416289594
[2025-07-28 18:26:01] 2025-07-28 15:47:40,048 | INFO     | -- intersect: 1158942204.6016212
[2025-07-28 18:26:01] 2025-07-28 15:47:40,048 | INFO     | intersect: 1158942204.6016212
[2025-07-28 18:26:01] 2025-07-28 15:47:40,049 | INFO     | chi2: 0.011288739078307693
[2025-07-28 18:26:01] 2025-07-28 15:47:40,049 | INFO     | -- intersect: 1158942204.6016212
[2025-07-28 18:26:01] 2025-07-28 15:47:40,049 | INFO     | current memory leak: -0.66 B/s (using 221 data points, chi2=0.01)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,054 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,054 | INFO     | ..............................
[2025-07-28 18:26:01] 2025-07-28 15:47:40,054 | INFO     | . Timing measurements:
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . get job = 0 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . initial setup = 2 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . payload setup = 12 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . stage-in = 0 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . payload execution = 15393 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . stage-out = 3 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | . log creation = 1 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,055 | INFO     | ..............................
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | 
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | job summary report
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | --------------------------------------------------
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | PanDA job id: 6747411015
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | task id: 45743349
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | errors: (none)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | pilot state: finished 
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | transexitcode: 0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | exeerrorcode: 0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | exeerrordiag: 
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | exitcode: 0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | exitmsg: OK
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | cpuconsumptiontime: 59655 s
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | nevents: 400
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | neventsw: 0
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | pid: 18583
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | pgrp: 18583
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | corecount: 8
[2025-07-28 18:26:01] 2025-07-28 15:47:40,322 | INFO     | event service: False
[2025-07-28 18:26:01] 2025-07-28 15:47:40,323 | INFO     | sizes: {0: 2396647, 1: 2397503, 2: 2397503, 10: 2397793, 12: 2397821, 15409: 2428890, 15413: 2432322, 15416: 2432378, 15504: 2432572}
[2025-07-28 18:26:01] 2025-07-28 15:47:40,323 | INFO     | --------------------------------------------------
[2025-07-28 18:26:01] 2025-07-28 15:47:40,323 | INFO     | 
[2025-07-28 18:26:01] 2025-07-28 15:47:40,323 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-28 18:26:01] 2025-07-28 15:47:40,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 18:26:01] 2025-07-28 15:47:40,819 | INFO     | job 6747411015 has completed (purged errors)
[2025-07-28 18:26:01] 2025-07-28 15:47:40,819 | INFO     | overall cleanup function is called
[2025-07-28 18:26:01] 2025-07-28 15:47:41,828 | INFO     | --- collectZombieJob: --- 10, [18583]
[2025-07-28 18:26:01] 2025-07-28 15:47:41,828 | INFO     | zombie collector waiting for pid 18583
[2025-07-28 18:26:01] 2025-07-28 15:47:41,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 18:26:01] 2025-07-28 15:47:41,828 | INFO     | collected zombie processes
[2025-07-28 18:26:01] 2025-07-28 15:47:41,828 | INFO     | will attempt to kill all subprocesses of pid=18583
[2025-07-28 18:26:01] 2025-07-28 15:47:41,947 | INFO     | process IDs to be killed: [18583] (in reverse order)
[2025-07-28 18:26:01] 2025-07-28 15:47:42,517 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 18:26:01] 2025-07-28 15:47:42,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 18:26:01] 2025-07-28 15:47:42,520 | INFO     | did not find any defunct processes belonging to 18583
[2025-07-28 18:26:01] 2025-07-28 15:47:42,523 | INFO     | did not find any defunct processes belonging to 18583
[2025-07-28 18:26:01] 2025-07-28 15:47:42,523 | INFO     | ready for new job
[2025-07-28 18:26:01] 2025-07-28 15:47:42,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 18:26:01] 2025-07-28 15:47:42,525 | INFO     | ***************************************
[2025-07-28 18:26:01] 2025-07-28 15:47:42,526 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 18:26:01] 2025-07-28 15:47:42,526 | INFO     | ***************************************
[2025-07-28 18:26:01] 2025-07-28 15:47:42,526 | INFO     | 
[2025-07-28 18:26:01] 2025-07-28 15:47:42,526 | INFO     | pilot is running in a VM
[2025-07-28 18:26:01] 2025-07-28 15:47:42,527 | INFO     | architecture information:
[2025-07-28 18:26:01] 2025-07-28 15:47:42,537 | INFO     | executing command: cat /etc/os-release
[2025-07-28 18:26:01] 2025-07-28 15:47:42,803 | INFO     | cat /etc/os-release:
[2025-07-28 18:26:01] NAME="CentOS Linux"
[2025-07-28 18:26:01] VERSION="7 (Core)"
[2025-07-28 18:26:01] ID="centos"
[2025-07-28 18:26:01] ID_LIKE="rhel fedora"
[2025-07-28 18:26:01] VERSION_ID="7"
[2025-07-28 18:26:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 18:26:01] ANSI_COLOR="0;31"
[2025-07-28 18:26:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 18:26:01] HOME_URL="https://www.centos.org/"
[2025-07-28 18:26:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 18:26:01] 
[2025-07-28 18:26:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 18:26:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 18:26:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 18:26:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 18:26:01] 
[2025-07-28 18:26:01] 2025-07-28 15:47:42,804 | INFO     | ***************************************
[2025-07-28 18:26:01] 2025-07-28 15:47:43,307 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-28 18:26:01] 2025-07-28 15:47:43,654 | INFO     | sufficient remaining disk space (496889757696 B)
[2025-07-28 18:26:01] 2025-07-28 15:47:43,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 18:26:01] 2025-07-28 15:47:43,655 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 18:26:01] 2025-07-28 15:47:43,655 | INFO     | update_server=False
[2025-07-28 18:26:01] 2025-07-28 15:47:43,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 18:26:01] 2025-07-28 15:47:43,677 | INFO     | all job control threads have been joined
[2025-07-28 18:26:01] 2025-07-28 15:47:43,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 18:26:01] 2025-07-28 15:47:44,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 18:26:01] 2025-07-28 15:47:44,273 | INFO     | aborting loop
[2025-07-28 18:26:01] 2025-07-28 15:47:44,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 18:26:01] 2025-07-28 15:47:44,605 | INFO     | all data control threads have been joined
[2025-07-28 18:26:01] 2025-07-28 15:47:44,661 | INFO     | [job] retrieve thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:44,683 | INFO     | [job] control thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:44,697 | INFO     | all payload control threads have been joined
[2025-07-28 18:26:01] 2025-07-28 15:47:44,904 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,064 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 18:26:01] 2025-07-28 15:47:45,279 | INFO     | [job] job monitor thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,534 | INFO     | [payload] validate_post thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,611 | INFO     | [data] control thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,703 | INFO     | [payload] control thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,724 | INFO     | [job] validate thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,740 | INFO     | [data] copytool_in thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:45,864 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:46,122 | INFO     | [payload] failed_post thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:46,207 | INFO     | [job] queue monitor thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:46,357 | INFO     | [data] copytool_out thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:47,840 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 18:26:01] 2025-07-28 15:47:48,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079563466560)>', '<ExcThread(monitor, started 140078613526272)>']
[2025-07-28 18:26:01] 2025-07-28 15:47:53,398 | INFO     | all workflow threads have been joined
[2025-07-28 18:26:01] 2025-07-28 15:47:53,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 18:26:01] 2025-07-28 15:47:53,398 | INFO     | traces error code: 0
[2025-07-28 18:26:01] 2025-07-28 15:47:53,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 18:26:01] 2025-07-28 15:48:13,710 | INFO     | PID=12011 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 18:26:01] 2025-07-28 15:48:13,710 | INFO     | .. there are 9 such processes running
[2025-07-28 18:26:01] 2025-07-28 15:48:13,711 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 18:26:01] 2025-07-28 15:48:13,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 18:26:01] 2025-07-28 15:48:13,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 18:26:01] 2025-07-28 15:48:13,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 18:26:01] 2025-07-28 15:48:13,712 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 18:26:01] 2025-07-28 15:48:13,712 | INFO     | [monitor] control thread has ended
[2025-07-28 18:26:01] 2025-07-28 15:48:13,989 [wrapper] ==== pilot stdout END ====
[2025-07-28 18:26:01] 2025-07-28 15:48:14,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 18:26:01] 2025-07-28 15:48:14,054 [wrapper] pilotpid: 12011
[2025-07-28 18:26:01] 2025-07-28 15:48:14,127 [wrapper] Pilot exit status: 0
[2025-07-28 18:26:01] 2025-07-28 15:48:14,475 [wrapper] pandaids: 6747411015
[2025-07-28 18:26:01] 2025-07-28 15:48:15,441 [wrapper] cleanup supervisor_pilot 27967 12012
[2025-07-28 18:26:01] 2025-07-28 15:48:15,550 [wrapper] Test setup, not cleaning
[2025-07-28 18:26:01] 2025-07-28 15:48:15,612 [wrapper] apfmon messages muted
[2025-07-28 18:26:01] 2025-07-28 15:48:15,675 [wrapper] ==== wrapper stdout END ====
[2025-07-28 18:26:01] 2025-07-28 15:48:15,746 [wrapper] ==== wrapper stderr END ====
[2025-07-28 18:26:01]  *** Error codes and diagnostics ***
[2025-07-28 18:26:01]     "exeErrorCode": 0,
[2025-07-28 18:26:01]     "exeErrorDiag": "",
[2025-07-28 18:26:01]     "pilotErrorCode": 0,
[2025-07-28 18:26:01]     "pilotErrorDiag": "",
[2025-07-28 18:26:01]  *** Listing of results directory ***
[2025-07-28 18:26:01] total 351472
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc    530466 Jul 27 13:59 pilot3.tar.gz
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc      5112 Jul 27 14:24 queuedata.json
[2025-07-28 18:26:01] -rwx------. 1 boinc boinc     36292 Jul 27 14:24 runpilot2-wrapper.sh
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc       100 Jul 28 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 18:26:01] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 13:28 run_atlas
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc       105 Jul 28 13:28 job.xml
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc 150235050 Jul 28 13:28 EVNT.45743347._002675.pool.root.1
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc      6392 Jul 28 13:28 init_data.xml
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:28 start_atlas.sh
[2025-07-28 18:26:01] drwxrwx--x. 2 boinc boinc        68 Jul 28 13:28 shared
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc    542897 Jul 28 13:28 input.tar.gz
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc         0 Jul 28 13:28 boinc_lockfile
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc      2563 Jul 28 13:28 pandaJob.out
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc    978460 Jul 28 13:28 agis_schedconf.cvmfs.json
[2025-07-28 18:26:01] drwx------. 4 boinc boinc      4096 Jul 28 13:28 pilot3
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc 202332129 Jul 28 17:44 HITS.45743349._048294.pool.root.1
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc       531 Jul 28 17:44 boinc_task_state.xml
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc      1016 Jul 28 17:46 memory_monitor_summary.json
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc   1589827 Jul 28 17:46 agis_ddmendpoints.agis.ALL.json
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc    403619 Jul 28 17:46 log.45743349._048294.job.log.tgz.1
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc      7769 Jul 28 17:47 heartbeat.json
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc        95 Jul 28 17:48 pilot_heartbeat.json
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc       890 Jul 28 17:48 pilotlog.txt
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc   1339089 Jul 28 17:48 log.45743349._048294.job.log.1
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc       357 Jul 28 17:48 output.list
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc       620 Jul 28 17:48 runtime_log
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc   1761280 Jul 28 17:48 result.tar.gz
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc       657 Jul 28 17:48 zTZLDmQbF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmrX2KDmt6Xf6n.diag
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc      8660 Jul 28 17:48 runtime_log.err
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc      8192 Jul 28 18:26 boinc_mmap_file
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc        28 Jul 28 18:26 wrapper_checkpoint.txt
[2025-07-28 18:26:01] -rw-r--r--. 1 boinc boinc     20574 Jul 28 18:26 stderr.txt
[2025-07-28 18:26:01] HITS file was successfully produced:
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc 202332129 Jul 28 17:44 shared/HITS.pool.root.1
[2025-07-28 18:26:01]  *** Contents of shared directory: ***
[2025-07-28 18:26:01] total 346576
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc 150235050 Jul 28 13:28 ATLAS.root_0
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:28 start_atlas.sh
[2025-07-28 18:26:01] -rw-r--r--. 2 boinc boinc    542897 Jul 28 13:28 input.tar.gz
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc 202332129 Jul 28 17:44 HITS.pool.root.1
[2025-07-28 18:26:01] -rw-------. 1 boinc boinc   1761280 Jul 28 17:48 result.tar.gz
18:26:03 (7993): run_atlas exited; CPU time 59846.208439
18:26:03 (7993): called boinc_finish(0)

</stderr_txt>
]]>

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