Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:50:14 (21216): wrapper (7.7.26015): starting
13:50:14 (21216): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 13:50:14] Arguments: --nthreads 12
[2025-07-27 13:50:14] Threads: 12
[2025-07-27 13:50:14] Checking for CVMFS
[2025-07-27 13:50:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:50:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:50:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:50:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:50:15] 2.11.2.0 2949 112324 92368 148819 1 57 10718765 20275200 1 130560 0 38106061 99.971 8853523 10059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 13:50:15] CVMFS is ok
[2025-07-27 13:50:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:50:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:50:15] Further information can be found at the LHC@home message board.
[2025-07-27 13:50:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:50:15] Checking for apptainer binary...
[2025-07-27 13:50:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:50:15] Running /usr/bin/apptainer --version
[2025-07-27 13:50:15] apptainer version 1.3.2-1.el7
[2025-07-27 13:50:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:50:16] c-205-13.aglt2.org
[2025-07-27 13:50:16] apptainer works
[2025-07-27 13:50:16] Set ATHENA_PROC_NUMBER=12
[2025-07-27 13:50:16] Set ATHENA_CORE_NUMBER=12
[2025-07-27 13:50:16] Starting ATLAS job with PandaID=6746845108
[2025-07-27 13:50:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:13:15]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:13:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 15:13:15]  is_altstaged=None
[2025-07-27 15:13:15]  is_tar=False
[2025-07-27 15:13:15]  lfn=log.45743349._046435.job.log.tgz.1
[2025-07-27 15:13:15]  mtime=0
[2025-07-27 15:13:15]  protocol_id=None
[2025-07-27 15:13:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:13:15]  replicas=None
[2025-07-27 15:13:15]  scope=mc23_13p6TeV
[2025-07-27 15:13:15]  status=None
[2025-07-27 15:13:15]  status_code=0
[2025-07-27 15:13:15]  storage_token=
[2025-07-27 15:13:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746845108/log.45743349._046435.job.log.tgz.1
[2025-07-27 15:13:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/5d/log.45743349._046435.job.log.tgz.1
[2025-07-27 15:13:15]  workdir=None
[2025-07-27 15:13:15] ]
[2025-07-27 15:13:15] 2025-07-27 19:12:37,553 | INFO     | transferring file log.45743349._046435.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746845108/log.45743349._046435.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:13:15] 2025-07-27 19:12:37,553 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746845108/log.45743349._046435.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._046435.job
[2025-07-27 15:13:15] 2025-07-27 19:12:37,580 | INFO     | adding to output.list: log.45743349._046435.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/5d/log.45743349._046435.job.log.tg
[2025-07-27 15:13:15] 2025-07-27 19:12:37,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:13:15] 2025-07-27 19:12:37,581 | INFO     | summary of transferred files:
[2025-07-27 15:13:15] 2025-07-27 19:12:37,582 | INFO     |  -- lfn=log.45743349._046435.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:13:15] 2025-07-27 19:12:37,582 | INFO     | stage-out finished correctly
[2025-07-27 15:13:15] 2025-07-27 19:12:37,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:13:15] 2025-07-27 19:12:37,753 | INFO     | job 6746845108 has state=finished
[2025-07-27 15:13:15] 2025-07-27 19:12:37,754 | INFO     | preparing for final server update for job 6746845108 in state='finished'
[2025-07-27 15:13:15] 2025-07-27 19:12:37,754 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:13:15] 2025-07-27 19:12:37,755 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:13:15] 2025-07-27 19:12:37,755 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:13:15] 2025-07-27 19:12:37,755 | INFO     | job 6746845108 has finished - writing final server update
[2025-07-27 15:13:15] 2025-07-27 19:12:37,755 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:13:15] 2025-07-27 19:12:37,756 | INFO     | executing command: lscpu
[2025-07-27 15:13:15] 2025-07-27 19:12:37,782 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:13:15] 2025-07-27 19:12:39,092 | INFO     | monitor loop #368: job 0:6746845108 is in state 'finished'
[2025-07-27 15:13:15] 2025-07-27 19:12:39,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:13:15] 2025-07-27 19:12:41,595 | INFO     | monitor loop #369: job 0:6746845108 is in state 'finished'
[2025-07-27 15:13:15] 2025-07-27 19:12:41,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,624 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 15:13:15] 2025-07-27 19:12:42,628 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 15:13:15] 2025-07-27 19:12:42,631 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746845108/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,631 | INFO     | extracted standard info from prmon json
[2025-07-27 15:13:15] 2025-07-27 19:12:42,631 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:13:15] 2025-07-27 19:12:42,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:13:15] 2025-07-27 19:12:42,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:13:15] 2025-07-27 19:12:42,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:13:15] 2025-07-27 19:12:42,634 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:13:15] 2025-07-27 19:12:42,634 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 15:13:15] 2025-07-27 19:12:42,634 | INFO     | sum of deviations: -2957699802.0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | mean x: 1753641191.5
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | mean y: 2704105.5405405406
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | -- intersect: 41288490680.0818
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | intersect: 41288490680.0818
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | chi2: 0.044233484368889096
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | -- intersect: 41288490680.0818
[2025-07-27 15:13:15] 2025-07-27 19:12:42,635 | INFO     | current memory leak: -23.54 B/s (using 74 data points, chi2=0.04)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | ..............................
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | . Timing measurements:
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | . get job = 0 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | . initial setup = 2 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | . payload setup = 9 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,636 | INFO     | . stage-in = 0 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,637 | INFO     | . payload execution = 4898 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,637 | INFO     | . stage-out = 0 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,637 | INFO     | . log creation = 0 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,637 | INFO     | ..............................
[2025-07-27 15:13:15] 2025-07-27 19:12:42,722 | INFO     | 
[2025-07-27 15:13:15] 2025-07-27 19:12:42,722 | INFO     | job summary report
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | --------------------------------------------------
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | PanDA job id: 6746845108
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | task id: 45743349
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | errors: (none)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:13:15] 2025-07-27 19:12:42,723 | INFO     | pilot state: finished 
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | transexitcode: 0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | exeerrorcode: 0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | exeerrordiag: 
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | exitcode: 0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | exitmsg: OK
[2025-07-27 15:13:15] 2025-07-27 19:12:42,724 | INFO     | cpuconsumptiontime: 54319 s
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | nevents: 400
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | neventsw: 0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | pid: 31252
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | pgrp: 31252
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | corecount: 12
[2025-07-27 15:13:15] 2025-07-27 19:12:42,725 | INFO     | event service: False
[2025-07-27 15:13:15] 2025-07-27 19:12:42,726 | INFO     | sizes: {0: 2397425, 5: 2397687, 11: 2397743, 4911: 2423993, 4912: 2433047, 4917: 2433185}
[2025-07-27 15:13:15] 2025-07-27 19:12:42,726 | INFO     | --------------------------------------------------
[2025-07-27 15:13:15] 2025-07-27 19:12:42,726 | INFO     | 
[2025-07-27 15:13:15] 2025-07-27 19:12:42,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:13:15] 2025-07-27 19:12:42,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:13:15] 2025-07-27 19:12:42,756 | INFO     | job 6746845108 has completed (purged errors)
[2025-07-27 15:13:15] 2025-07-27 19:12:42,756 | INFO     | overall cleanup function is called
[2025-07-27 15:13:15] 2025-07-27 19:12:43,764 | INFO     | --- collectZombieJob: --- 10, [31252]
[2025-07-27 15:13:15] 2025-07-27 19:12:43,764 | INFO     | zombie collector waiting for pid 31252
[2025-07-27 15:13:15] 2025-07-27 19:12:43,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:13:15] 2025-07-27 19:12:43,764 | INFO     | collected zombie processes
[2025-07-27 15:13:15] 2025-07-27 19:12:43,764 | INFO     | will attempt to kill all subprocesses of pid=31252
[2025-07-27 15:13:15] 2025-07-27 19:12:43,856 | INFO     | process IDs to be killed: [31252] (in reverse order)
[2025-07-27 15:13:15] 2025-07-27 19:12:43,910 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:13:15] 2025-07-27 19:12:43,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:13:15] 2025-07-27 19:12:43,914 | INFO     | did not find any defunct processes belonging to 31252
[2025-07-27 15:13:15] 2025-07-27 19:12:43,917 | INFO     | did not find any defunct processes belonging to 31252
[2025-07-27 15:13:15] 2025-07-27 19:12:43,917 | INFO     | ready for new job
[2025-07-27 15:13:15] 2025-07-27 19:12:43,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:13:15] 2025-07-27 19:12:43,919 | INFO     | ***************************************
[2025-07-27 15:13:15] 2025-07-27 19:12:43,919 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:13:15] 2025-07-27 19:12:43,920 | INFO     | ***************************************
[2025-07-27 15:13:15] 2025-07-27 19:12:43,920 | INFO     | 
[2025-07-27 15:13:15] 2025-07-27 19:12:43,920 | INFO     | architecture information:
[2025-07-27 15:13:15] 2025-07-27 19:12:43,921 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:13:15] 2025-07-27 19:12:43,937 | INFO     | cat /etc/os-release:
[2025-07-27 15:13:15] NAME="CentOS Linux"
[2025-07-27 15:13:15] VERSION="7 (Core)"
[2025-07-27 15:13:15] ID="centos"
[2025-07-27 15:13:15] ID_LIKE="rhel fedora"
[2025-07-27 15:13:15] VERSION_ID="7"
[2025-07-27 15:13:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:13:15] ANSI_COLOR="0;31"
[2025-07-27 15:13:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:13:15] HOME_URL="https://www.centos.org/"
[2025-07-27 15:13:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:13:15] 
[2025-07-27 15:13:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:13:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:13:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:13:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:13:15] 
[2025-07-27 15:13:15] 2025-07-27 19:12:43,937 | INFO     | ***************************************
[2025-07-27 15:13:15] 2025-07-27 19:12:44,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:13:15] 2025-07-27 19:12:44,456 | INFO     | sufficient remaining disk space (29341253632 B)
[2025-07-27 15:13:15] 2025-07-27 19:12:44,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:13:15] 2025-07-27 19:12:44,457 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:13:15] 2025-07-27 19:12:44,457 | INFO     | update_server=False
[2025-07-27 15:13:15] 2025-07-27 19:12:44,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:13:15] 2025-07-27 19:12:44,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:13:15] 2025-07-27 19:12:44,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:13:15] 2025-07-27 19:12:44,842 | INFO     | all data control threads have been joined
[2025-07-27 15:13:15] 2025-07-27 19:12:45,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:13:15] 2025-07-27 19:12:45,103 | INFO     | aborting loop
[2025-07-27 15:13:15] 2025-07-27 19:12:45,381 | INFO     | all job control threads have been joined
[2025-07-27 15:13:15] 2025-07-27 19:12:45,463 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:45,464 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:45,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:13:15] 2025-07-27 19:12:45,693 | INFO     | all payload control threads have been joined
[2025-07-27 15:13:15] 2025-07-27 19:12:45,706 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:45,847 | INFO     | [data] control thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,109 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,365 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,386 | INFO     | [job] control thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,417 | INFO     | [job] validate thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,541 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,551 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,623 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,695 | INFO     | [payload] control thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:46,821 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:47,697 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:48,464 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:55,288 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:13:15] 2025-07-27 19:12:56,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:13:15] 2025-07-27 19:12:58,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006085551936)>', '<ExcThread(monitor, started 140005129320192)>']
[2025-07-27 15:13:15] 2025-07-27 19:13:03,203 | INFO     | all workflow threads have been joined
[2025-07-27 15:13:15] 2025-07-27 19:13:03,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:13:15] 2025-07-27 19:13:03,203 | INFO     | traces error code: 0
[2025-07-27 15:13:15] 2025-07-27 19:13:03,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | INFO     | PID=24824 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:13:15] 2025-07-27 19:13:15,564 | INFO     | [monitor] control thread has ended
[2025-07-27 15:13:15] 2025-07-27 19:13:15,666 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:13:15] 2025-07-27 19:13:15,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:13:15] 2025-07-27 19:13:15,673 [wrapper] pilotpid: 24824
[2025-07-27 15:13:15] 2025-07-27 19:13:15,677 [wrapper] Pilot exit status: 0
[2025-07-27 15:13:15] 2025-07-27 19:13:15,693 [wrapper] pandaids: 6746845108
[2025-07-27 15:13:15] 2025-07-27 19:13:15,731 [wrapper] cleanup supervisor_pilot 20611 24825
[2025-07-27 15:13:15] 2025-07-27 19:13:15,735 [wrapper] Test setup, not cleaning
[2025-07-27 15:13:15] 2025-07-27 19:13:15,738 [wrapper] apfmon messages muted
[2025-07-27 15:13:15] 2025-07-27 19:13:15,742 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:13:15] 2025-07-27 19:13:15,746 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:13:15]  *** Error codes and diagnostics ***
[2025-07-27 15:13:15]     "exeErrorCode": 0,
[2025-07-27 15:13:15]     "exeErrorDiag": "",
[2025-07-27 15:13:15]     "pilotErrorCode": 0,
[2025-07-27 15:13:15]     "pilotErrorDiag": "",
[2025-07-27 15:13:15]  *** Listing of results directory ***
[2025-07-27 15:13:15] total 437812
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 05:35 queuedata.json
[2025-07-27 15:13:15] -rwx------ 1 boincer umatlas     36292 Jul 27 05:35 runpilot2-wrapper.sh
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas       100 Jul 27 13:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:13:15] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 13:50 run_atlas
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas       105 Jul 27 13:50 job.xml
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas 230093321 Jul 27 13:50 EVNT.45743347._001479.pool.root.1
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 13:50 start_atlas.sh
[2025-07-27 15:13:15] drwxrwx--x 2 boincer umatlas      4096 Jul 27 13:50 shared
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas    542910 Jul 27 13:50 input.tar.gz
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas         0 Jul 27 13:50 boinc_lockfile
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 13:50 pandaJob.out
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas    980117 Jul 27 13:50 agis_schedconf.cvmfs.json
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas   1593052 Jul 27 13:50 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:13:15] drwx------ 4 boincer umatlas      4096 Jul 27 13:50 pilot3
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 15:10 init_data.xml
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas 212670888 Jul 27 15:12 HITS.45743349._046435.pool.root.1
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas       529 Jul 27 15:12 boinc_task_state.xml
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas      1050 Jul 27 15:12 memory_monitor_summary.json
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas        95 Jul 27 15:12 pilot_heartbeat.json
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas    369124 Jul 27 15:12 log.45743349._046435.job.log.tgz.1
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas      7850 Jul 27 15:12 heartbeat.json
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 15:12 boinc_mmap_file
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas        27 Jul 27 15:12 wrapper_checkpoint.txt
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas       745 Jul 27 15:13 pilotlog.txt
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas    469438 Jul 27 15:13 log.45743349._046435.job.log.1
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas       357 Jul 27 15:13 output.list
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas       620 Jul 27 15:13 runtime_log
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas    860160 Jul 27 15:13 result.tar.gz
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 15:13 runtime_log.err
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas       659 Jul 27 15:13 9LcLDmLyC07n9Rq4apOajLDm4fhM0noT9bVof3QYDmlK2KDmijz05m.diag
[2025-07-27 15:13:15] -rw-r--r-- 1 boincer umatlas     21402 Jul 27 15:13 stderr.txt
[2025-07-27 15:13:15] HITS file was successfully produced:
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas 212670888 Jul 27 15:12 shared/HITS.pool.root.1
[2025-07-27 15:13:15]  *** Contents of shared directory: ***
[2025-07-27 15:13:15] total 433784
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas 230093321 Jul 27 13:50 ATLAS.root_0
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 13:50 start_atlas.sh
[2025-07-27 15:13:15] -rw-r--r-- 2 boincer umatlas    542910 Jul 27 13:50 input.tar.gz
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas 212670888 Jul 27 15:12 HITS.pool.root.1
[2025-07-27 15:13:15] -rw------- 1 boincer umatlas    860160 Jul 27 15:13 result.tar.gz
15:13:17 (21216): run_atlas exited; CPU time 54288.973531
15:13:17 (21216): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN