Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 10:46:40 (70900): Detected: vboxwrapper 26206
2025-07-27 10:46:40 (70900): Detected: BOINC client v8.2.4
2025-07-27 10:46:40 (70900): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-07-27 10:46:40 (70900): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 10:46:41 (70900): Create VM. (boinc_3691c63b20faa96f, slot#2)
2025-07-27 10:46:41 (70900): Setting Memory Size for VM. (4200MB)
2025-07-27 10:46:42 (70900): Setting CPU Count for VM. (2)
2025-07-27 10:46:42 (70900): Setting Chipset Options for VM.
2025-07-27 10:46:42 (70900): Setting Graphics Controller Options for VM.
2025-07-27 10:46:42 (70900): Setting Boot Options for VM.
2025-07-27 10:46:43 (70900): Setting Network Configuration for NAT.
2025-07-27 10:46:43 (70900): Enabling VM Network Access.
2025-07-27 10:46:43 (70900): Disabling USB Support for VM.
2025-07-27 10:46:43 (70900): Disabling COM Port Support for VM.
2025-07-27 10:46:44 (70900): Disabling LPT Port Support for VM.
2025-07-27 10:46:44 (70900): Disabling Audio Support for VM.
2025-07-27 10:46:44 (70900): Disabling Clipboard Support for VM.
2025-07-27 10:46:44 (70900): Disabling Drag and Drop Support for VM.
2025-07-27 10:46:45 (70900): Adding storage controller(s) to VM.
2025-07-27 10:46:45 (70900): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 10:46:45 (70900): Adding VirtualBox Guest Additions to VM.
2025-07-27 10:46:46 (70900): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 10:46:46 (70900): forwarding host port 62500 to guest port 80
2025-07-27 10:46:46 (70900): Enabling remote desktop for VM.
2025-07-27 10:46:47 (70900): Enabling shared directory for VM.
2025-07-27 10:46:47 (70900): Starting VM using VBoxManage interface. (boinc_3691c63b20faa96f, slot#2)
2025-07-27 10:46:53 (70900): Successfully started VM. (PID = '67608')
2025-07-27 10:46:53 (70900): Reporting VM Process ID to BOINC.
2025-07-27 10:46:53 (70900): Guest Log: BIOS: VirtualBox 7.0.14
2025-07-27 10:46:53 (70900): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 10:46:53 (70900): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 10:46:53 (70900): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 10:46:53 (70900): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 10:46:53 (70900): Detected: Web Application Enabled (http://localhost:62500)
2025-07-27 10:46:53 (70900): Detected: Remote Desktop Enabled (localhost:62504)
2025-07-27 10:46:53 (70900): Preference change detected
2025-07-27 10:46:53 (70900): Setting CPU throttle for VM. (100%)
2025-07-27 10:46:54 (70900): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 10:46:55 (70900): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 10:46:55 (70900): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 10:46:58 (70900): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 10:46:58 (70900): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 10:46:58 (70900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 10:47:03 (70900): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 10:47:03 (70900): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 10:47:07 (70900): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000105 main     Log opened 2025-07-27T17:47:06.211601000Z
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000179 main     OS Product: Linux
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000221 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000239 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000239 main     Process ID: 1258
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.000239 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 10:47:07 (70900): Guest Log: 00:00:00.001321 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 10:47:07 (70900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 10:47:07 (70900): Guest Log: [INFO] Mounting shared directory
2025-07-27 10:47:07 (70900): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 10:47:10 (70900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 10:47:10 (70900): Guest Log: [INFO] Detected branch: prod
2025-07-27 10:47:10 (70900): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 10:47:10 (70900): Guest Log: Copying input files
2025-07-27 10:47:11 (70900): Guest Log: Copied input files into RunAtlas.
2025-07-27 10:47:11 (70900): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 10:47:11 (70900): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 10:47:11 (70900): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 10:47:11 (70900): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 10:47:19 (70900): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 10:47:20 (70900): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 10:47:20 (70900): Guest Log: 2.6.3.0 1531 0 32192 148819 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 10:47:20 (70900): Guest Log: copied the webapp to /var/www
2025-07-27 10:47:20 (70900): Guest Log: ATHENA_PROC_NUMBER=2
2025-07-27 10:47:20 (70900): Guest Log: ATHENA_CORE_NUMBER=2
2025-07-27 10:47:20 (70900): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 10:47:20 (70900): Guest Log:  *** Starting ATLAS job. (PandaID=6747411007 taskID=45743349) ***
2025-07-27 12:21:05 (70900): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 12:57:42 (70900): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 12:57:44 (70900): Guest Log: 01:34:01.282095 timesync vgsvcTimeSyncWorker: Radical host time change: 2 207 041 000 000ns (HostNow=1 753 646 263 578 000 000 ns HostLast=1 753 644 056 537 000 000 ns)
2025-07-27 12:57:54 (70900): Guest Log: 01:34:11.285533 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 206 094 521 000ns (GuestNow=1 753 646 273 584 756 000 ns GuestLast=1 753 644 067 490 235 000 ns fSetTimeLastLoop=true )
2025-07-27 13:03:33 (70900): Status Report: Elapsed Time: '6000.000000'
2025-07-27 13:03:33 (70900): Status Report: CPU Time: '11678.296875'
2025-07-27 14:28:15 (70900): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 14:28:18 (70900): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 14:43:40 (70900): Status Report: Elapsed Time: '12000.000000'
2025-07-27 14:43:40 (70900): Status Report: CPU Time: '23684.437500'
2025-07-27 14:49:40 (70900): Guest Log:  *** Job finished ***
2025-07-27 14:49:40 (70900): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:23,470 | INFO     | [job] queue monitor thread has finished
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:30,409 | INFO     | job.realtimelogging is not enabled
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:31,557 | INFO     | [payload] run_realtimelog thread has finished
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:31,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472511506240)>', '<ExcThread(monitor, started 140471795967744)>']
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:32,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:32,935 | INFO     | [monitor] control thread has ended
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,938 | INFO     | all workflow threads have been joined
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,939 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,939 | INFO     | traces error code: 0
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,993 [wrapper] ==== pilot stdout END ====
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,995 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:36,998 [wrapper] pilotpid: 5809
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,001 [wrapper] Pilot exit status: 0
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,046 [wrapper] pandaids: 6747411007
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,061 [wrapper] cleanup supervisor_pilot 13207 5810
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,064 [wrapper] Test setup, not cleaning
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,067 [wrapper] apfmon messages muted
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,070 [wrapper] ==== wrapper stdout END ====
2025-07-27 14:49:40 (70900): Guest Log: 2025-07-27 21:49:37,073 [wrapper] ==== wrapper stderr END ====
2025-07-27 14:49:40 (70900): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 14:49:40 (70900): Guest Log:     "exeErrorCode": 0,
2025-07-27 14:49:40 (70900): Guest Log:     "exeErrorDiag": "",
2025-07-27 14:49:40 (70900): Guest Log:     "pilotErrorCode": 0,
2025-07-27 14:49:40 (70900): Guest Log:     "pilotErrorDiag": "",
2025-07-27 14:49:40 (70900): Guest Log:  *** Listing of results directory ***
2025-07-27 14:49:40 (70900): Guest Log: total 213320
2025-07-27 14:49:40 (70900): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 11:59 pilot3.tar.gz
2025-07-27 14:49:40 (70900): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 12:24 queuedata.json
2025-07-27 14:49:40 (70900): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 12:24 runpilot2-wrapper.sh
2025-07-27 14:49:40 (70900): Guest Log: -rwxr-xr-x. 1 atlas atlas      9400 Jul 27 17:47 init_data.xml
2025-07-27 14:49:40 (70900): Guest Log: -rwxr-xr-x. 1 atlas atlas    542896 Jul 27 17:47 input.tar.gz
2025-07-27 14:49:40 (70900): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 27 17:47 start_atlas.sh
2025-07-27 14:49:40 (70900): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 17:47 EVNT.45743347._002675.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 14:49:40 (70900): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 27 17:47 pandaJob.out
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas    980117 Jul 27 17:47 agis_schedconf.cvmfs.json
2025-07-27 14:49:40 (70900): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 17:47 pilot3
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas        97 Jul 27 21:48 pilot_heartbeat.json
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas 211860366 Jul 27 21:48 HITS.45743349._048286.pool.root.1
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas      1036 Jul 27 21:49 memory_monitor_summary.json
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 21:49 agis_ddmendpoints.agis.ALL.json
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas    275512 Jul 27 21:49 log.45743349._048286.job.log.tgz.1
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas      7839 Jul 27 21:49 heartbeat.json
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 27 21:49 pilotlog.txt
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas   1107874 Jul 27 21:49 log.45743349._048286.job.log.1
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 21:49 output.list
2025-07-27 14:49:40 (70900): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 21:49 runtime_log
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas   1402880 Jul 27 21:49 result.tar.gz
2025-07-27 14:49:40 (70900): Guest Log: -rw-r--r--. 1 atlas atlas      8585 Jul 27 21:49 runtime_log.err
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas       653 Jul 27 21:49 4gLLDmQbF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmjX2KDmMy85Tm.diag
2025-07-27 14:49:40 (70900): Guest Log: Looking for outputfile HITS.45743349._048286.pool.root.1
2025-07-27 14:49:40 (70900): Guest Log: HITS file was successfully produced
2025-07-27 14:49:40 (70900): Guest Log: -rw-------. 1 atlas atlas 211860366 Jul 27 21:48 /home/atlas/RunAtlas/HITS.45743349._048286.pool.root.1
2025-07-27 14:49:41 (70900): Guest Log: Successfully finished the ATLAS job!
2025-07-27 14:49:41 (70900): Guest Log: Copying the results back to the shared directory!
2025-07-27 14:49:41 (70900): Guest Log:  *** Contents of shared directory: ***
2025-07-27 14:49:41 (70900): Guest Log: total 355544
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root 150235050 Jul 27 17:46 ATLAS.root_0
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root 211860366 Jul 27  2025 HITS.pool.root.1
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root      9400 Jul 27 17:46 init_data.xml
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root    542896 Jul 27 17:46 input.tar.gz
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root   1402880 Jul 27  2025 result.tar.gz
2025-07-27 14:49:41 (70900): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 17:46 start_atlas.sh
2025-07-27 14:49:41 (70900): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 14:49:41 (70900): VM Completion File Detected.
2025-07-27 14:49:41 (70900): Powering off VM.
2025-07-27 14:49:41 (70900): Successfully stopped VM.
2025-07-27 14:49:41 (70900): Deregistering VM. (boinc_3691c63b20faa96f, slot#2)
2025-07-27 14:49:41 (70900): Removing network bandwidth throttle group from VM.
2025-07-27 14:49:42 (70900): Removing VM from VirtualBox.
14:49:47 (70900): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN