Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:42:13 (29213): wrapper (7.7.26015): starting
13:42:13 (29213): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 13:42:13] Arguments: --nthreads 12
[2025-07-27 13:42:13] Threads: 12
[2025-07-27 13:42:13] Checking for CVMFS
[2025-07-27 13:42:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:42:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:42:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:42:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:42:14] 2.11.2.0 2925 112316 93952 148819 1 57 12418881 20275200 1 130560 0 38521729 99.973 9388351 10354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 13:42:14] CVMFS is ok
[2025-07-27 13:42:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:42:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:42:14] Further information can be found at the LHC@home message board.
[2025-07-27 13:42:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:42:14] Checking for apptainer binary...
[2025-07-27 13:42:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:42:14] Running /usr/bin/apptainer --version
[2025-07-27 13:42:14] apptainer version 1.3.2-1.el7
[2025-07-27 13:42:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:42:15] c-205-10.aglt2.org
[2025-07-27 13:42:15] apptainer works
[2025-07-27 13:42:15] Set ATHENA_PROC_NUMBER=12
[2025-07-27 13:42:15] Set ATHENA_CORE_NUMBER=12
[2025-07-27 13:42:15] Starting ATLAS job with PandaID=6747410907
[2025-07-27 13:42:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:06:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:06:53]  is_altstaged=None
[2025-07-27 15:06:53]  is_tar=False
[2025-07-27 15:06:53]  lfn=log.45743349._048186.job.log.tgz.1
[2025-07-27 15:06:53]  mtime=0
[2025-07-27 15:06:53]  protocol_id=None
[2025-07-27 15:06:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:06:53]  replicas=None
[2025-07-27 15:06:53]  scope=mc23_13p6TeV
[2025-07-27 15:06:53]  status=None
[2025-07-27 15:06:53]  status_code=0
[2025-07-27 15:06:53]  storage_token=
[2025-07-27 15:06:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747410907/log.45743349._048186.job.log.tgz.1
[2025-07-27 15:06:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/d0/log.45743349._048186.job.log.tgz.1
[2025-07-27 15:06:53]  workdir=None
[2025-07-27 15:06:53] ]
[2025-07-27 15:06:53] 2025-07-27 19:06:14,388 | INFO     | transferring file log.45743349._048186.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747410907/log.45743349._048186.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:06:53] 2025-07-27 19:06:14,388 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747410907/log.45743349._048186.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._048186.job
[2025-07-27 15:06:53] 2025-07-27 19:06:14,410 | INFO     | adding to output.list: log.45743349._048186.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/d0/log.45743349._048186.job.log.tg
[2025-07-27 15:06:53] 2025-07-27 19:06:14,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:06:53] 2025-07-27 19:06:14,411 | INFO     | summary of transferred files:
[2025-07-27 15:06:53] 2025-07-27 19:06:14,411 | INFO     |  -- lfn=log.45743349._048186.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:06:53] 2025-07-27 19:06:14,412 | INFO     | stage-out finished correctly
[2025-07-27 15:06:53] 2025-07-27 19:06:15,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:06:53] 2025-07-27 19:06:16,461 | INFO     | monitor loop #378: job 0:6747410907 is in state 'finished'
[2025-07-27 15:06:53] 2025-07-27 19:06:16,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:06:53] 2025-07-27 19:06:16,963 | INFO     | job 6747410907 has state=finished
[2025-07-27 15:06:53] 2025-07-27 19:06:16,963 | INFO     | preparing for final server update for job 6747410907 in state='finished'
[2025-07-27 15:06:53] 2025-07-27 19:06:16,964 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:06:53] 2025-07-27 19:06:16,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:06:53] 2025-07-27 19:06:16,964 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:06:53] 2025-07-27 19:06:16,964 | INFO     | job 6747410907 has finished - writing final server update
[2025-07-27 15:06:53] 2025-07-27 19:06:16,964 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:06:53] 2025-07-27 19:06:16,965 | INFO     | executing command: lscpu
[2025-07-27 15:06:53] 2025-07-27 19:06:16,991 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:06:53] 2025-07-27 19:06:18,964 | INFO     | monitor loop #379: job 0:6747410907 is in state 'finished'
[2025-07-27 15:06:53] 2025-07-27 19:06:18,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:06:53] 2025-07-27 19:06:21,472 | INFO     | monitor loop #380: job 0:6747410907 is in state 'finished'
[2025-07-27 15:06:53] 2025-07-27 19:06:21,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:06:53] 2025-07-27 19:06:21,975 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 15:06:53] 2025-07-27 19:06:21,978 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-07-27 15:06:53] 2025-07-27 19:06:21,981 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747410907/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:06:53] 2025-07-27 19:06:21,982 | INFO     | extracted standard info from prmon json
[2025-07-27 15:06:53] 2025-07-27 19:06:21,982 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:06:53] 2025-07-27 19:06:21,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:06:53] 2025-07-27 19:06:21,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:06:53] 2025-07-27 19:06:21,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:06:53] 2025-07-27 19:06:21,985 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:06:53] 2025-07-27 19:06:21,985 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 15:06:53] 2025-07-27 19:06:21,986 | INFO     | sum of deviations: -5395920310.000001
[2025-07-27 15:06:53] 2025-07-27 19:06:21,986 | INFO     | mean x: 1753640742.0
[2025-07-27 15:06:53] 2025-07-27 19:06:21,986 | INFO     | mean y: 2733991.2133333334
[2025-07-27 15:06:53] 2025-07-27 19:06:21,986 | INFO     | -- intersect: 72349838531.48376
[2025-07-27 15:06:53] 2025-07-27 19:06:21,986 | INFO     | intersect: 72349838531.48376
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | chi2: 0.08122221308029495
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | -- intersect: 72349838531.48376
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | current memory leak: -41.26 B/s (using 75 data points, chi2=0.08)
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | ..............................
[2025-07-27 15:06:53] 2025-07-27 19:06:21,987 | INFO     | . Timing measurements:
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . get job = 0 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . initial setup = 2 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . payload setup = 9 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . stage-in = 0 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . payload execution = 4993 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . stage-out = 0 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | . log creation = 0 s
[2025-07-27 15:06:53] 2025-07-27 19:06:21,988 | INFO     | ..............................
[2025-07-27 15:06:53] 2025-07-27 19:06:22,254 | INFO     | 
[2025-07-27 15:06:53] 2025-07-27 19:06:22,255 | INFO     | job summary report
[2025-07-27 15:06:53] 2025-07-27 19:06:22,255 | INFO     | --------------------------------------------------
[2025-07-27 15:06:53] 2025-07-27 19:06:22,255 | INFO     | PanDA job id: 6747410907
[2025-07-27 15:06:53] 2025-07-27 19:06:22,255 | INFO     | task id: 45743349
[2025-07-27 15:06:53] 2025-07-27 19:06:22,255 | INFO     | errors: (none)
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | pilot state: finished 
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | transexitcode: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | exeerrorcode: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | exeerrordiag: 
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | exitcode: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | exitmsg: OK
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | cpuconsumptiontime: 53556 s
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | nevents: 400
[2025-07-27 15:06:53] 2025-07-27 19:06:22,256 | INFO     | neventsw: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | pid: 7843
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | pgrp: 7843
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | corecount: 12
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | event service: False
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 5007: 2424066, 5010: 2433248, 5017: 2433386}
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | --------------------------------------------------
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | 
[2025-07-27 15:06:53] 2025-07-27 19:06:22,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:06:53] 2025-07-27 19:06:22,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:06:53] 2025-07-27 19:06:22,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:06:53] 2025-07-27 19:06:22,286 | INFO     | job 6747410907 has completed (purged errors)
[2025-07-27 15:06:53] 2025-07-27 19:06:22,286 | INFO     | overall cleanup function is called
[2025-07-27 15:06:53] 2025-07-27 19:06:23,294 | INFO     | --- collectZombieJob: --- 10, [7843]
[2025-07-27 15:06:53] 2025-07-27 19:06:23,294 | INFO     | zombie collector waiting for pid 7843
[2025-07-27 15:06:53] 2025-07-27 19:06:23,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:06:53] 2025-07-27 19:06:23,294 | INFO     | collected zombie processes
[2025-07-27 15:06:53] 2025-07-27 19:06:23,294 | INFO     | will attempt to kill all subprocesses of pid=7843
[2025-07-27 15:06:53] 2025-07-27 19:06:23,385 | INFO     | process IDs to be killed: [7843] (in reverse order)
[2025-07-27 15:06:53] 2025-07-27 19:06:23,435 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:06:53] 2025-07-27 19:06:23,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:06:53] 2025-07-27 19:06:23,439 | INFO     | did not find any defunct processes belonging to 7843
[2025-07-27 15:06:53] 2025-07-27 19:06:23,442 | INFO     | did not find any defunct processes belonging to 7843
[2025-07-27 15:06:53] 2025-07-27 19:06:23,442 | INFO     | ready for new job
[2025-07-27 15:06:53] 2025-07-27 19:06:23,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:06:53] 2025-07-27 19:06:23,444 | INFO     | ***************************************
[2025-07-27 15:06:53] 2025-07-27 19:06:23,444 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:06:53] 2025-07-27 19:06:23,444 | INFO     | ***************************************
[2025-07-27 15:06:53] 2025-07-27 19:06:23,444 | INFO     | 
[2025-07-27 15:06:53] 2025-07-27 19:06:23,445 | INFO     | architecture information:
[2025-07-27 15:06:53] 2025-07-27 19:06:23,445 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:06:53] 2025-07-27 19:06:23,461 | INFO     | cat /etc/os-release:
[2025-07-27 15:06:53] NAME="CentOS Linux"
[2025-07-27 15:06:53] VERSION="7 (Core)"
[2025-07-27 15:06:53] ID="centos"
[2025-07-27 15:06:53] ID_LIKE="rhel fedora"
[2025-07-27 15:06:53] VERSION_ID="7"
[2025-07-27 15:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:06:53] ANSI_COLOR="0;31"
[2025-07-27 15:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:06:53] HOME_URL="https://www.centos.org/"
[2025-07-27 15:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:06:53] 
[2025-07-27 15:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:06:53] 
[2025-07-27 15:06:53] 2025-07-27 19:06:23,461 | INFO     | ***************************************
[2025-07-27 15:06:53] 2025-07-27 19:06:23,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:06:53] 2025-07-27 19:06:23,981 | INFO     | sufficient remaining disk space (29518462976 B)
[2025-07-27 15:06:53] 2025-07-27 19:06:23,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:06:53] 2025-07-27 19:06:23,982 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:06:53] 2025-07-27 19:06:23,982 | INFO     | update_server=False
[2025-07-27 15:06:53] 2025-07-27 19:06:23,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:06:53] 2025-07-27 19:06:23,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:06:53] 2025-07-27 19:06:24,630 | INFO     | all payload control threads have been joined
[2025-07-27 15:06:53] 2025-07-27 19:06:24,785 | INFO     | all job control threads have been joined
[2025-07-27 15:06:53] 2025-07-27 19:06:24,795 | INFO     | all data control threads have been joined
[2025-07-27 15:06:53] 2025-07-27 19:06:24,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:06:53] 2025-07-27 19:06:24,978 | INFO     | aborting loop
[2025-07-27 15:06:53] 2025-07-27 19:06:24,987 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:24,987 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:06:53] 2025-07-27 19:06:25,093 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,160 | INFO     | [job] validate thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,164 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,369 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,505 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,636 | INFO     | [payload] control thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,721 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,790 | INFO     | [job] control thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,798 | INFO     | [data] control thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:25,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:06:53] 2025-07-27 19:06:25,983 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:26,000 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:26,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:27,022 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:29,806 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:06:53] 2025-07-27 19:06:30,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075335878464)>', '<ExcThread(monitor, started 140074763142912)>']
[2025-07-27 15:06:53] 2025-07-27 19:06:35,672 | INFO     | all workflow threads have been joined
[2025-07-27 15:06:53] 2025-07-27 19:06:35,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:06:53] 2025-07-27 19:06:35,673 | INFO     | traces error code: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:35,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:06:53] 2025-07-27 19:06:53,627 | INFO     | PID=342 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-07-27 15:06:53] 2025-07-27 19:06:53,628 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:06:53] 2025-07-27 19:06:53,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:06:53] 2025-07-27 19:06:53,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:06:53] 2025-07-27 19:06:53,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:06:53] 2025-07-27 19:06:53,628 | INFO     | [monitor] control thread has ended
[2025-07-27 15:06:53] 2025-07-27 19:06:53,728 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:06:53] 2025-07-27 19:06:53,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:06:53] 2025-07-27 19:06:53,736 [wrapper] pilotpid: 342
[2025-07-27 15:06:53] 2025-07-27 19:06:53,740 [wrapper] Pilot exit status: 0
[2025-07-27 15:06:53] 2025-07-27 19:06:53,757 [wrapper] pandaids: 6747410907
[2025-07-27 15:06:53] 2025-07-27 19:06:53,798 [wrapper] cleanup supervisor_pilot 27572 343
[2025-07-27 15:06:53] 2025-07-27 19:06:53,802 [wrapper] Test setup, not cleaning
[2025-07-27 15:06:53] 2025-07-27 19:06:53,806 [wrapper] apfmon messages muted
[2025-07-27 15:06:53] 2025-07-27 19:06:53,810 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:06:53] 2025-07-27 19:06:53,814 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:06:53]  *** Error codes and diagnostics ***
[2025-07-27 15:06:53]     "exeErrorCode": 0,
[2025-07-27 15:06:53]     "exeErrorDiag": "",
[2025-07-27 15:06:53]     "pilotErrorCode": 0,
[2025-07-27 15:06:53]     "pilotErrorDiag": "",
[2025-07-27 15:06:53]  *** Listing of results directory ***
[2025-07-27 15:06:53] total 353660
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 08:17 queuedata.json
[2025-07-27 15:06:53] -rwx------ 1 boincer umatlas     36292 Jul 27 08:18 runpilot2-wrapper.sh
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas       100 Jul 27 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:06:53] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 13:42 run_atlas
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas       105 Jul 27 13:42 job.xml
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas 143318876 Jul 27 13:42 EVNT.45743347._002668.pool.root.1
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 13:42 start_atlas.sh
[2025-07-27 15:06:53] drwxrwx--x 2 boincer umatlas      4096 Jul 27 13:42 shared
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 13:42 input.tar.gz
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas         0 Jul 27 13:42 boinc_lockfile
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 13:42 pandaJob.out
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas    980117 Jul 27 13:42 agis_schedconf.cvmfs.json
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas   1593052 Jul 27 13:42 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:06:53] drwx------ 4 boincer umatlas      4096 Jul 27 13:42 pilot3
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 15:01 init_data.xml
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas 213255175 Jul 27 15:05 HITS.45743349._048186.pool.root.1
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas      1049 Jul 27 15:06 memory_monitor_summary.json
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas       530 Jul 27 15:06 boinc_task_state.xml
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas    370377 Jul 27 15:06 log.45743349._048186.job.log.tgz.1
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas      7855 Jul 27 15:06 heartbeat.json
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas        27 Jul 27 15:06 wrapper_checkpoint.txt
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 15:06 boinc_mmap_file
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas       743 Jul 27 15:06 pilotlog.txt
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas        95 Jul 27 15:06 pilot_heartbeat.json
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas    477344 Jul 27 15:06 log.45743349._048186.job.log.1
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas       357 Jul 27 15:06 output.list
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas       620 Jul 27 15:06 runtime_log
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas    870400 Jul 27 15:06 result.tar.gz
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 15:06 runtime_log.err
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas       659 Jul 27 15:06 fcZLDm7VF07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLEVLDmizmBLo.diag
[2025-07-27 15:06:53] -rw-r--r-- 1 boincer umatlas     21496 Jul 27 15:06 stderr.txt
[2025-07-27 15:06:53] HITS file was successfully produced:
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas 213255175 Jul 27 15:05 shared/HITS.pool.root.1
[2025-07-27 15:06:53]  *** Contents of shared directory: ***
[2025-07-27 15:06:53] total 349624
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas 143318876 Jul 27 13:42 ATLAS.root_0
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 13:42 start_atlas.sh
[2025-07-27 15:06:53] -rw-r--r-- 2 boincer umatlas    542895 Jul 27 13:42 input.tar.gz
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas 213255175 Jul 27 15:05 HITS.pool.root.1
[2025-07-27 15:06:53] -rw------- 1 boincer umatlas    870400 Jul 27 15:06 result.tar.gz
15:06:55 (29213): run_atlas exited; CPU time 53477.784772
15:06:55 (29213): called boinc_finish(0)

</stderr_txt>
]]>

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