Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:35:02 (4029097): wrapper (7.7.26015): starting
13:35:02 (4029097): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:35:02] Arguments: --nthreads 8
[2025-07-27 13:35:02] Threads: 8
[2025-07-27 13:35:02] Checking for CVMFS
[2025-07-27 13:35:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:35:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:35:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:35:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:35:02] 2.13.0.0 3724680 19253 239864 148819 0 439 30684926 32935937 21564 16776704 1 90048390 99.572 129996295 19450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 13:35:02] CVMFS is ok
[2025-07-27 13:35:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:35:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:35:02] Further information can be found at the LHC@home message board.
[2025-07-27 13:35:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:35:02] Checking for apptainer binary...
[2025-07-27 13:35:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:35:02] Running /usr/bin/apptainer --version
[2025-07-27 13:35:03] apptainer version 1.4.1-1.el9
[2025-07-27 13:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:35:03] c7-4-31.aglt2.org
[2025-07-27 13:35:03] apptainer works
[2025-07-27 13:35:03] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:35:03] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:35:03] Starting ATLAS job with PandaID=6747411184
[2025-07-27 13:35:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:16:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:16:12]  status_code=0
[2025-07-27 15:16:12]  storage_token=
[2025-07-27 15:16:12]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747411184/log.45743349._048425.job.log.tgz.1
[2025-07-27 15:16:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/38/log.45743349._048425.job.log.tgz.1
[2025-07-27 15:16:12]  workdir=None
[2025-07-27 15:16:12] ]
[2025-07-27 15:16:12] 2025-07-27 19:15:24,607 | INFO     | transferring file log.45743349._048425.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747411184/log.45743349._048425.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:16:12] 2025-07-27 19:15:24,607 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747411184/log.45743349._048425.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._048425.job
[2025-07-27 15:16:12] 2025-07-27 19:15:24,652 | INFO     | adding to output.list: log.45743349._048425.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/38/log.45743349._048425.job.log.tg
[2025-07-27 15:16:12] 2025-07-27 19:15:24,653 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:16:12] 2025-07-27 19:15:24,653 | INFO     | summary of transferred files:
[2025-07-27 15:16:12] 2025-07-27 19:15:24,653 | INFO     |  -- lfn=log.45743349._048425.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:16:12] 2025-07-27 19:15:24,653 | INFO     | stage-out finished correctly
[2025-07-27 15:16:12] 2025-07-27 19:15:24,729 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:16:12] 2025-07-27 19:15:26,465 | INFO     | monitor loop #414: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:26,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:27,634 | INFO     | job 6747411184 has state=finished
[2025-07-27 15:16:12] 2025-07-27 19:15:27,634 | INFO     | preparing for final server update for job 6747411184 in state='finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:27,635 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:16:12] 2025-07-27 19:15:27,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:16:12] 2025-07-27 19:15:27,635 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:16:12] 2025-07-27 19:15:27,635 | INFO     | job 6747411184 has finished - writing final server update
[2025-07-27 15:16:12] 2025-07-27 19:15:27,635 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:16:12] 2025-07-27 19:15:27,641 | INFO     | executing command: lscpu
[2025-07-27 15:16:12] 2025-07-27 19:15:27,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:16:12] 2025-07-27 19:15:28,971 | INFO     | monitor loop #415: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:28,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:31,477 | INFO     | monitor loop #416: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:31,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:33,982 | INFO     | monitor loop #417: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:33,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:35,183 | INFO     | PID=4034143 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 15:16:12] 2025-07-27 19:15:35,184 | INFO     | .. there are 23 such processes running
[2025-07-27 15:16:12] 2025-07-27 19:15:36,487 | INFO     | monitor loop #418: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:36,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:38,990 | INFO     | monitor loop #419: job 0:6747411184 is in state 'finished'
[2025-07-27 15:16:12] 2025-07-27 19:15:38,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,369 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:16:12] 2025-07-27 19:15:39,376 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2977.314135416667
[2025-07-27 15:16:12] 2025-07-27 19:15:39,391 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747411184/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,392 | INFO     | extracted standard info from prmon json
[2025-07-27 15:16:12] 2025-07-27 19:15:39,392 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:16:12] 2025-07-27 19:15:39,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:16:12] 2025-07-27 19:15:39,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:16:12] 2025-07-27 19:15:39,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:16:12] 2025-07-27 19:15:39,395 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:16:12] 2025-07-27 19:15:39,395 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | sum of deviations: -8875630906.0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | mean x: 1753640819.0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | mean y: 2312311.824175824
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | -- intersect: 66620026440.28713
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | intersect: 66620026440.28713
[2025-07-27 15:16:12] 2025-07-27 19:15:39,396 | INFO     | chi2: 0.09574122788998699
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | -- intersect: 66620026440.28713
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | current memory leak: -37.99 B/s (using 91 data points, chi2=0.10)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | could have reported an average CPU frequency of 2930 MHz (7 samples)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | ..............................
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | . Timing measurements:
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | . get job = 0 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,397 | INFO     | . initial setup = 3 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | . payload setup = 13 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | . stage-in = 0 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | . payload execution = 5959 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | . stage-out = 1 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | . log creation = 0 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,398 | INFO     | ..............................
[2025-07-27 15:16:12] 2025-07-27 19:15:39,495 | INFO     | 
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | job summary report
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | --------------------------------------------------
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | PanDA job id: 6747411184
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | task id: 45743349
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | errors: (none)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | pilot state: finished 
[2025-07-27 15:16:12] 2025-07-27 19:15:39,496 | INFO     | transexitcode: 0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | exeerrorcode: 0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | exeerrordiag: 
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | exitcode: 0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | exitmsg: OK
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | cpuconsumptiontime: 39526 s
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | nevents: 400
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | neventsw: 0
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | pid: 4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | pgrp: 4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | corecount: 8
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | event service: False
[2025-07-27 15:16:12] 2025-07-27 19:15:39,497 | INFO     | sizes: {0: 2397475, 10: 2397737, 11: 2397765, 5977: 2424829, 5979: 2433883, 5993: 2434021}
[2025-07-27 15:16:12] 2025-07-27 19:15:39,498 | INFO     | --------------------------------------------------
[2025-07-27 15:16:12] 2025-07-27 19:15:39,498 | INFO     | 
[2025-07-27 15:16:12] 2025-07-27 19:15:39,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 15:16:12] 2025-07-27 19:15:39,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | job 6747411184 has completed (purged errors)
[2025-07-27 15:16:12] 2025-07-27 19:15:39,549 | INFO     | overall cleanup function is called
[2025-07-27 15:16:12] 2025-07-27 19:15:40,557 | INFO     | --- collectZombieJob: --- 10, [4040624]
[2025-07-27 15:16:12] 2025-07-27 19:15:40,558 | INFO     | zombie collector waiting for pid 4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:40,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:16:12] 2025-07-27 19:15:40,558 | INFO     | collected zombie processes
[2025-07-27 15:16:12] 2025-07-27 19:15:40,558 | INFO     | will attempt to kill all subprocesses of pid=4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:41,084 | INFO     | process IDs to be killed: [4040624] (in reverse order)
[2025-07-27 15:16:12] 2025-07-27 19:15:41,301 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:16:12] 2025-07-27 19:15:41,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:16:12] 2025-07-27 19:15:41,327 | INFO     | did not find any defunct processes belonging to 4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:41,349 | INFO     | did not find any defunct processes belonging to 4040624
[2025-07-27 15:16:12] 2025-07-27 19:15:41,350 | INFO     | ready for new job
[2025-07-27 15:16:12] 2025-07-27 19:15:41,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:16:12] 2025-07-27 19:15:41,352 | INFO     | ***************************************
[2025-07-27 15:16:12] 2025-07-27 19:15:41,352 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:16:12] 2025-07-27 19:15:41,353 | INFO     | ***************************************
[2025-07-27 15:16:12] 2025-07-27 19:15:41,353 | INFO     | 
[2025-07-27 15:16:12] 2025-07-27 19:15:41,373 | INFO     | architecture information:
[2025-07-27 15:16:12] 2025-07-27 19:15:41,376 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:16:12] 2025-07-27 19:15:41,413 | INFO     | cat /etc/os-release:
[2025-07-27 15:16:12] NAME="CentOS Linux"
[2025-07-27 15:16:12] VERSION="7 (Core)"
[2025-07-27 15:16:12] ID="centos"
[2025-07-27 15:16:12] ID_LIKE="rhel fedora"
[2025-07-27 15:16:12] VERSION_ID="7"
[2025-07-27 15:16:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:16:12] ANSI_COLOR="0;31"
[2025-07-27 15:16:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:16:12] HOME_URL="https://www.centos.org/"
[2025-07-27 15:16:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:16:12] 
[2025-07-27 15:16:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:16:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:16:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:16:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:16:12] 
[2025-07-27 15:16:12] 2025-07-27 19:15:41,414 | INFO     | ***************************************
[2025-07-27 15:16:12] 2025-07-27 19:15:41,916 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 15:16:12] 2025-07-27 19:15:41,955 | INFO     | sufficient remaining disk space (75764858880 B)
[2025-07-27 15:16:12] 2025-07-27 19:15:41,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:16:12] 2025-07-27 19:15:41,956 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:16:12] 2025-07-27 19:15:41,956 | INFO     | update_server=False
[2025-07-27 15:16:12] 2025-07-27 19:15:41,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:16:12] 2025-07-27 19:15:42,114 | INFO     | all payload control threads have been joined
[2025-07-27 15:16:12] 2025-07-27 19:15:42,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:16:12] 2025-07-27 19:15:42,508 | INFO     | aborting loop
[2025-07-27 15:16:12] 2025-07-27 19:15:42,695 | INFO     | all data control threads have been joined
[2025-07-27 15:16:12] 2025-07-27 19:15:42,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:16:12] 2025-07-27 19:15:42,962 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:42,984 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,084 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,120 | INFO     | [payload] control thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,204 | INFO     | all job control threads have been joined
[2025-07-27 15:16:12] 2025-07-27 19:15:43,269 | INFO     | [job] validate thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,515 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,701 | INFO     | [data] control thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,780 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,905 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:43,916 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:44,210 | INFO     | [job] control thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:44,273 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:44,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:16:12] 2025-07-27 19:15:44,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:16:12] 2025-07-27 19:15:44,790 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:45,519 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:48,411 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:16:12] 2025-07-27 19:15:50,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692930488128)>', '<ExcThread(monitor, started 140692441519872)>']
[2025-07-27 15:16:12] 2025-07-27 19:15:55,284 | INFO     | all workflow threads have been joined
[2025-07-27 15:16:12] 2025-07-27 19:15:55,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:16:12] 2025-07-27 19:15:55,285 | INFO     | traces error code: 0
[2025-07-27 15:16:12] 2025-07-27 19:15:55,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:16:12] 2025-07-27 19:16:12,050 | INFO     | PID=4034143 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:16:12] 2025-07-27 19:16:12,051 | INFO     | .. there are 23 such processes running
[2025-07-27 15:16:12] 2025-07-27 19:16:12,053 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:16:12] 2025-07-27 19:16:12,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:16:12] 2025-07-27 19:16:12,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:16:12] 2025-07-27 19:16:12,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:16:12] 2025-07-27 19:16:12,053 | INFO     | [monitor] control thread has ended
[2025-07-27 15:16:12] 2025-07-27 19:16:12,269 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:16:12] 2025-07-27 19:16:12,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:16:12] 2025-07-27 19:16:12,286 [wrapper] pilotpid: 4034143
[2025-07-27 15:16:12] 2025-07-27 19:16:12,290 [wrapper] Pilot exit status: 0
[2025-07-27 15:16:12] 2025-07-27 19:16:12,329 [wrapper] pandaids: 6747411184
[2025-07-27 15:16:12] 2025-07-27 19:16:12,485 [wrapper] cleanup supervisor_pilot  393657 4034144
[2025-07-27 15:16:12] 2025-07-27 19:16:12,489 [wrapper] Test setup, not cleaning
[2025-07-27 15:16:12] 2025-07-27 19:16:12,496 [wrapper] apfmon messages muted
[2025-07-27 15:16:12] 2025-07-27 19:16:12,500 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:16:12] 2025-07-27 19:16:12,502 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:16:12]  *** Error codes and diagnostics ***
[2025-07-27 15:16:12]     "exeErrorCode": 0,
[2025-07-27 15:16:12]     "exeErrorDiag": "",
[2025-07-27 15:16:12]     "pilotErrorCode": 0,
[2025-07-27 15:16:12]     "pilotErrorDiag": "",
[2025-07-27 15:16:12]  *** Listing of results directory ***
[2025-07-27 15:16:12] total 352140
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:59 pilot3.tar.gz
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 08:31 queuedata.json
[2025-07-27 15:16:12] -rwx------. 1 boincer umatlas     36292 Jul 27 08:31 runpilot2-wrapper.sh
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas       100 Jul 27 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:16:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 13:35 run_atlas
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas       105 Jul 27 13:35 job.xml
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas 144101601 Jul 27 13:35 EVNT.45743347._002684.pool.root.1
[2025-07-27 15:16:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 13:35 shared
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 13:35 input.tar.gz
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:35 start_atlas.sh
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas         0 Jul 27 13:35 boinc_lockfile
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 13:35 pandaJob.out
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas    980117 Jul 27 13:35 agis_schedconf.cvmfs.json
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:35 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:16:12] drwx------. 4 boincer umatlas      4096 Jul 27 13:35 pilot3
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas      6934 Jul 27 15:11 init_data.xml
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:14 boinc_task_state.xml
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas 210846144 Jul 27 15:14 HITS.45743349._048425.pool.root.1
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas      1041 Jul 27 15:15 memory_monitor_summary.json
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas    315561 Jul 27 15:15 log.45743349._048425.job.log.tgz.1
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas      7787 Jul 27 15:15 heartbeat.json
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:16 boinc_mmap_file
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:16 wrapper_checkpoint.txt
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas        95 Jul 27 15:16 pilot_heartbeat.json
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas       823 Jul 27 15:16 pilotlog.txt
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas    563373 Jul 27 15:16 log.45743349._048425.job.log.1
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas       357 Jul 27 15:16 output.list
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:16 runtime_log
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas    901120 Jul 27 15:16 result.tar.gz
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 15:16 runtime_log.err
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas       654 Jul 27 15:16 9EkMDmQiF07n9Rq4apOajLDm4fhM0noT9bVof3QYDmdY2KDm2WqPsm.diag
[2025-07-27 15:16:12] -rw-r--r--. 1 boincer umatlas     22240 Jul 27 15:16 stderr.txt
[2025-07-27 15:16:12] HITS file was successfully produced:
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas 210846144 Jul 27 15:14 shared/HITS.pool.root.1
[2025-07-27 15:16:12]  *** Contents of shared directory: ***
[2025-07-27 15:16:12] total 348072
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas 144101601 Jul 27 13:35 ATLAS.root_0
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 13:35 input.tar.gz
[2025-07-27 15:16:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:35 start_atlas.sh
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas 210846144 Jul 27 15:14 HITS.pool.root.1
[2025-07-27 15:16:12] -rw-------. 1 boincer umatlas    901120 Jul 27 15:16 result.tar.gz
15:16:14 (4029097): run_atlas exited; CPU time 39746.335220
15:16:14 (4029097): called boinc_finish(0)

</stderr_txt>
]]>

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