Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:45 (2639607): wrapper (7.7.26015): starting
13:36:45 (2639607): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 13:36:45] Arguments: --nthreads 10
[2025-07-27 13:36:45] Threads: 10
[2025-07-27 13:36:45] Checking for CVMFS
[2025-07-27 13:36:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:36:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:36:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:36:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:36:46] 2.13.1.0 128519 5404 119836 148819 3 105 29399137 39288833 3925 16776704 0 4891895 99.509 6652587 43534 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 13:36:46] CVMFS is ok
[2025-07-27 13:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:36:46] Further information can be found at the LHC@home message board.
[2025-07-27 13:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:36:46] Checking for apptainer binary...
[2025-07-27 13:36:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:36:46] Running /usr/bin/apptainer --version
[2025-07-27 13:36:46] apptainer version 1.4.1-1.el9
[2025-07-27 13:36:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:36:46] c-211-3.aglt2.org
[2025-07-27 13:36:46] apptainer works
[2025-07-27 13:36:46] Set ATHENA_PROC_NUMBER=10
[2025-07-27 13:36:46] Set ATHENA_CORE_NUMBER=10
[2025-07-27 13:36:46] Starting ATLAS job with PandaID=6746590542
[2025-07-27 13:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:17:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:17:39]  replicas=None
[2025-07-27 15:17:39]  scope=mc23_13p6TeV
[2025-07-27 15:17:39]  status=None
[2025-07-27 15:17:39]  status_code=0
[2025-07-27 15:17:39]  storage_token=
[2025-07-27 15:17:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6746590542/log.45759399._000030.job.log.tgz.1
[2025-07-27 15:17:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/2f/log.45759399._000030.job.log.tgz.1
[2025-07-27 15:17:39]  workdir=None
[2025-07-27 15:17:39] ]
[2025-07-27 15:17:39] 2025-07-27 19:17:00,257 | INFO     | transferring file log.45759399._000030.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6746590542/log.45759399._000030.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 15:17:39] 2025-07-27 19:17:00,257 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6746590542/log.45759399._000030.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759399._000030.job
[2025-07-27 15:17:39] 2025-07-27 19:17:00,270 | INFO     | adding to output.list: log.45759399._000030.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/2f/log.45759399._000030.job.log.tg
[2025-07-27 15:17:39] 2025-07-27 19:17:00,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:17:39] 2025-07-27 19:17:00,272 | INFO     | summary of transferred files:
[2025-07-27 15:17:39] 2025-07-27 19:17:00,272 | INFO     |  -- lfn=log.45759399._000030.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:17:39] 2025-07-27 19:17:00,272 | INFO     | stage-out finished correctly
[2025-07-27 15:17:39] 2025-07-27 19:17:01,718 | WARNING  | process 2650216 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 15:17:39] 2025-07-27 19:17:01,719 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746590542/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:17:39] 2025-07-27 19:17:01,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:17:39] 2025-07-27 19:17:01,924 | INFO     | number of running child processes to parent process 2650216: 1
[2025-07-27 15:17:39] 2025-07-27 19:17:01,924 | INFO     | maximum number of monitored processes: 6
[2025-07-27 15:17:39] 2025-07-27 19:17:03,583 | INFO     | job 6746590542 has state=finished
[2025-07-27 15:17:39] 2025-07-27 19:17:03,583 | INFO     | preparing for final server update for job 6746590542 in state='finished'
[2025-07-27 15:17:39] 2025-07-27 19:17:03,584 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:17:39] 2025-07-27 19:17:03,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:17:39] 2025-07-27 19:17:03,584 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:17:39] 2025-07-27 19:17:03,584 | INFO     | job 6746590542 has finished - writing final server update
[2025-07-27 15:17:39] 2025-07-27 19:17:03,585 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:17:39] 2025-07-27 19:17:03,586 | INFO     | executing command: lscpu
[2025-07-27 15:17:39] 2025-07-27 19:17:03,628 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:17:39] 2025-07-27 19:17:04,427 | INFO     | monitor loop #448: job 0:6746590542 is in state 'finished'
[2025-07-27 15:17:39] 2025-07-27 19:17:04,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:17:39] 2025-07-27 19:17:06,930 | INFO     | monitor loop #449: job 0:6746590542 is in state 'finished'
[2025-07-27 15:17:39] 2025-07-27 19:17:06,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:17:39] 2025-07-27 19:17:06,988 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:17:39] 2025-07-27 19:17:06,992 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8185000000003
[2025-07-27 15:17:39] 2025-07-27 19:17:06,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746590542/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:17:39] 2025-07-27 19:17:06,997 | INFO     | extracted standard info from prmon json
[2025-07-27 15:17:39] 2025-07-27 19:17:06,997 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:17:39] 2025-07-27 19:17:06,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:17:39] 2025-07-27 19:17:06,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:17:39] 2025-07-27 19:17:06,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:17:39] 2025-07-27 19:17:06,999 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:17:39] 2025-07-27 19:17:06,999 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 15:17:39] 2025-07-27 19:17:06,999 | INFO     | sum of deviations: -17497041506.0
[2025-07-27 15:17:39] 2025-07-27 19:17:06,999 | INFO     | mean x: 1753640888.0
[2025-07-27 15:17:39] 2025-07-27 19:17:06,999 | INFO     | mean y: 2773688.1978021977
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | -- intersect: 131330108876.91441
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | intersect: 131330108876.91441
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | chi2: 0.16375626735563217
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | -- intersect: 131330108876.91441
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | current memory leak: -74.89 B/s (using 91 data points, chi2=0.16)
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2025-07-27 15:17:39] 2025-07-27 19:17:07,000 | INFO     | ..............................
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . Timing measurements:
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . get job = 0 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . initial setup = 2 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . payload setup = 5 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . stage-in = 0 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . payload execution = 5981 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . stage-out = 0 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | . log creation = 0 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,001 | INFO     | ..............................
[2025-07-27 15:17:39] 2025-07-27 19:17:07,122 | INFO     | 
[2025-07-27 15:17:39] 2025-07-27 19:17:07,122 | INFO     | job summary report
[2025-07-27 15:17:39] 2025-07-27 19:17:07,122 | INFO     | --------------------------------------------------
[2025-07-27 15:17:39] 2025-07-27 19:17:07,122 | INFO     | PanDA job id: 6746590542
[2025-07-27 15:17:39] 2025-07-27 19:17:07,122 | INFO     | task id: 45759399
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | errors: (none)
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | pilot state: finished 
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | transexitcode: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | exeerrorcode: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | exeerrordiag: 
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | exitcode: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | exitmsg: OK
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | cpuconsumptiontime: 55801 s
[2025-07-27 15:17:39] 2025-07-27 19:17:07,123 | INFO     | nevents: 400
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | neventsw: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | pid: 2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | pgrp: 2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | corecount: 10
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | event service: False
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | sizes: {0: 2397457, 4: 2397719, 11: 2397747, 5990: 2424614, 5991: 2433612, 5993: 2433668, 5998: 2433990}
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | --------------------------------------------------
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | 
[2025-07-27 15:17:39] 2025-07-27 19:17:07,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:17:39] 2025-07-27 19:17:07,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:17:39] 2025-07-27 19:17:07,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:17:39] 2025-07-27 19:17:07,151 | INFO     | job 6746590542 has completed (purged errors)
[2025-07-27 15:17:39] 2025-07-27 19:17:07,151 | INFO     | overall cleanup function is called
[2025-07-27 15:17:39] 2025-07-27 19:17:08,160 | INFO     | --- collectZombieJob: --- 10, [2650216]
[2025-07-27 15:17:39] 2025-07-27 19:17:08,160 | INFO     | zombie collector waiting for pid 2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:08,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:17:39] 2025-07-27 19:17:08,160 | INFO     | collected zombie processes
[2025-07-27 15:17:39] 2025-07-27 19:17:08,161 | INFO     | will attempt to kill all subprocesses of pid=2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:08,379 | INFO     | process IDs to be killed: [2650216] (in reverse order)
[2025-07-27 15:17:39] 2025-07-27 19:17:08,444 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:17:39] 2025-07-27 19:17:08,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:17:39] 2025-07-27 19:17:08,452 | INFO     | did not find any defunct processes belonging to 2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:08,459 | INFO     | did not find any defunct processes belonging to 2650216
[2025-07-27 15:17:39] 2025-07-27 19:17:08,459 | INFO     | ready for new job
[2025-07-27 15:17:39] 2025-07-27 19:17:08,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:17:39] 2025-07-27 19:17:08,462 | INFO     | ***************************************
[2025-07-27 15:17:39] 2025-07-27 19:17:08,462 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:17:39] 2025-07-27 19:17:08,462 | INFO     | ***************************************
[2025-07-27 15:17:39] 2025-07-27 19:17:08,462 | INFO     | 
[2025-07-27 15:17:39] 2025-07-27 19:17:08,464 | INFO     | architecture information:
[2025-07-27 15:17:39] 2025-07-27 19:17:08,465 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:17:39] 2025-07-27 19:17:08,482 | INFO     | cat /etc/os-release:
[2025-07-27 15:17:39] NAME="CentOS Linux"
[2025-07-27 15:17:39] VERSION="7 (Core)"
[2025-07-27 15:17:39] ID="centos"
[2025-07-27 15:17:39] ID_LIKE="rhel fedora"
[2025-07-27 15:17:39] VERSION_ID="7"
[2025-07-27 15:17:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:17:39] ANSI_COLOR="0;31"
[2025-07-27 15:17:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:17:39] HOME_URL="https://www.centos.org/"
[2025-07-27 15:17:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:17:39] 
[2025-07-27 15:17:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:17:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:17:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:17:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:17:39] 
[2025-07-27 15:17:39] 2025-07-27 19:17:08,483 | INFO     | ***************************************
[2025-07-27 15:17:39] 2025-07-27 19:17:08,985 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:17:39] 2025-07-27 19:17:09,004 | INFO     | sufficient remaining disk space (53842280448 B)
[2025-07-27 15:17:39] 2025-07-27 19:17:09,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:17:39] 2025-07-27 19:17:09,004 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:17:39] 2025-07-27 19:17:09,004 | INFO     | update_server=False
[2025-07-27 15:17:39] 2025-07-27 19:17:09,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:17:39] 2025-07-27 19:17:09,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:17:39] 2025-07-27 19:17:09,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:17:39] 2025-07-27 19:17:09,433 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 15:17:39] 2025-07-27 19:17:09,433 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 15:17:39] 2025-07-27 19:17:09,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:17:39] 2025-07-27 19:17:09,433 | INFO     | will abort loop
[2025-07-27 15:17:39] 2025-07-27 19:17:09,789 | INFO     | all data control threads have been joined
[2025-07-27 15:17:39] 2025-07-27 19:17:09,896 | INFO     | all job control threads have been joined
[2025-07-27 15:17:39] 2025-07-27 19:17:10,010 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,011 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,156 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,219 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,281 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,380 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,397 | INFO     | all payload control threads have been joined
[2025-07-27 15:17:39] 2025-07-27 19:17:10,438 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,665 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,794 | INFO     | [data] control thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:10,902 | INFO     | [job] control thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:11,010 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:11,402 | INFO     | [payload] control thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:11,427 | INFO     | [job] validate thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:11,481 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:12,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:17:39] 2025-07-27 19:17:16,370 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:19,312 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:17:39] 2025-07-27 19:17:20,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:17:39] 2025-07-27 19:17:21,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468284073792)>', '<ExcThread(monitor, started 140467568109312)>']
[2025-07-27 15:17:39] 2025-07-27 19:17:26,569 | INFO     | all workflow threads have been joined
[2025-07-27 15:17:39] 2025-07-27 19:17:26,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:17:39] 2025-07-27 19:17:26,570 | INFO     | traces error code: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:26,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:17:39] 2025-07-27 19:17:39,262 | INFO     | PID=2643559 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:17:39] 2025-07-27 19:17:39,263 | INFO     | .. there are 5 such processes running
[2025-07-27 15:17:39] 2025-07-27 19:17:39,264 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:17:39] 2025-07-27 19:17:39,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:17:39] 2025-07-27 19:17:39,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:17:39] 2025-07-27 19:17:39,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:17:39] 2025-07-27 19:17:39,264 | INFO     | [monitor] control thread has ended
[2025-07-27 15:17:39] 2025-07-27 19:17:39,381 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:17:39] 2025-07-27 19:17:39,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:17:39] 2025-07-27 19:17:39,387 [wrapper] pilotpid: 2643559
[2025-07-27 15:17:39] 2025-07-27 19:17:39,389 [wrapper] Pilot exit status: 0
[2025-07-27 15:17:39] 2025-07-27 19:17:39,400 [wrapper] pandaids: 6746590542
[2025-07-27 15:17:39] 2025-07-27 19:17:39,440 [wrapper] cleanup supervisor_pilot 2748071 2643560
[2025-07-27 15:17:39] 2025-07-27 19:17:39,444 [wrapper] Test setup, not cleaning
[2025-07-27 15:17:39] 2025-07-27 19:17:39,446 [wrapper] apfmon messages muted
[2025-07-27 15:17:39] 2025-07-27 19:17:39,448 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:17:39] 2025-07-27 19:17:39,451 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:17:39]  *** Error codes and diagnostics ***
[2025-07-27 15:17:39]     "exeErrorCode": 0,
[2025-07-27 15:17:39]     "exeErrorDiag": "",
[2025-07-27 15:17:39]     "pilotErrorCode": 0,
[2025-07-27 15:17:39]     "pilotErrorDiag": "",
[2025-07-27 15:17:39]  *** Listing of results directory ***
[2025-07-27 15:17:39] total 408768
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 04:09 pilot3.tar.gz
[2025-07-27 15:17:39] -rwx------. 1 boincer umatlas     36292 Jul 27 04:24 runpilot2-wrapper.sh
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 04:24 queuedata.json
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas       100 Jul 27 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:17:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 13:36 run_atlas
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas       105 Jul 27 13:36 job.xml
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas 242557863 Jul 27 13:36 EVNT.45759395._000002.pool.root.1
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:36 start_atlas.sh
[2025-07-27 15:17:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 13:36 shared
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 13:36 input.tar.gz
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas         0 Jul 27 13:36 boinc_lockfile
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas      2550 Jul 27 13:36 pandaJob.out
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas    980117 Jul 27 13:36 agis_schedconf.cvmfs.json
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:17:39] drwx------. 4 boincer umatlas      4096 Jul 27 13:36 pilot3
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas      6655 Jul 27 15:13 init_data.xml
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:16 boinc_task_state.xml
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas 170292235 Jul 27 15:16 HITS.45759399._000030.pool.root.1
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas      1038 Jul 27 15:16 memory_monitor_summary.json
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas    340041 Jul 27 15:17 log.45759399._000030.job.log.tgz.1
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas      7809 Jul 27 15:17 heartbeat.json
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:17 boinc_mmap_file
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:17 wrapper_checkpoint.txt
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas        95 Jul 27 15:17 pilot_heartbeat.json
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas       822 Jul 27 15:17 pilotlog.txt
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas    585702 Jul 27 15:17 log.45759399._000030.job.log.1
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas       357 Jul 27 15:17 output.list
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:17 runtime_log
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas    942080 Jul 27 15:17 result.tar.gz
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 15:17 runtime_log.err
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas       652 Jul 27 15:17 OpvLDm0qB07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxlULDmMm8OHo.diag
[2025-07-27 15:17:39] -rw-r--r--. 1 boincer umatlas     21867 Jul 27 15:17 stderr.txt
[2025-07-27 15:17:39] HITS file was successfully produced:
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas 170292235 Jul 27 15:16 shared/HITS.pool.root.1
[2025-07-27 15:17:39]  *** Contents of shared directory: ***
[2025-07-27 15:17:39] total 404656
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas 242557863 Jul 27 13:36 ATLAS.root_0
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:36 start_atlas.sh
[2025-07-27 15:17:39] -rw-r--r--. 2 boincer umatlas    542876 Jul 27 13:36 input.tar.gz
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas 170292235 Jul 27 15:16 HITS.pool.root.1
[2025-07-27 15:17:39] -rw-------. 1 boincer umatlas    942080 Jul 27 15:17 result.tar.gz
15:17:40 (2639607): run_atlas exited; CPU time 55893.947568
15:17:40 (2639607): called boinc_finish(0)

</stderr_txt>
]]>

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