Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:40 (1233395): wrapper (7.7.26015): starting
14:46:40 (1233395): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 14:46:40] Arguments: --nthreads 12
[2025-07-27 14:46:40] Threads: 12
[2025-07-27 14:46:40] Checking for CVMFS
[2025-07-27 14:46:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:46:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:46:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:46:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:46:40] 2.13.1.0 407057 13827 282536 148821 1 115 37764752 40960001 11380 16776704 0 24464400 99.680 39786012 35211 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 14:46:40] CVMFS is ok
[2025-07-27 14:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:46:40] Further information can be found at the LHC@home message board.
[2025-07-27 14:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:46:40] Checking for apptainer binary...
[2025-07-27 14:46:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:46:40] Running /usr/bin/apptainer --version
[2025-07-27 14:46:40] apptainer version 1.4.1-1.el9
[2025-07-27 14:46:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:46:40] c-210-31-3.aglt2.org
[2025-07-27 14:46:40] apptainer works
[2025-07-27 14:46:40] Set ATHENA_PROC_NUMBER=12
[2025-07-27 14:46:40] Set ATHENA_CORE_NUMBER=12
[2025-07-27 14:46:40] Starting ATLAS job with PandaID=6747499785
[2025-07-27 14:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:04:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:04:39]  replicas=None
[2025-07-27 16:04:39]  scope=mc23_13p6TeV
[2025-07-27 16:04:39]  status=None
[2025-07-27 16:04:39]  status_code=0
[2025-07-27 16:04:39]  storage_token=
[2025-07-27 16:04:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747499785/log.45743349._051170.job.log.tgz.1
[2025-07-27 16:04:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/38/log.45743349._051170.job.log.tgz.1
[2025-07-27 16:04:39]  workdir=None
[2025-07-27 16:04:39] ]
[2025-07-27 16:04:39] 2025-07-27 20:03:56,884 | INFO     | transferring file log.45743349._051170.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747499785/log.45743349._051170.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 16:04:39] 2025-07-27 20:03:56,885 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747499785/log.45743349._051170.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051170.job
[2025-07-27 16:04:39] 2025-07-27 20:03:56,904 | INFO     | adding to output.list: log.45743349._051170.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/38/log.45743349._051170.job.log.tg
[2025-07-27 16:04:39] 2025-07-27 20:03:56,905 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:04:39] 2025-07-27 20:03:56,905 | INFO     | summary of transferred files:
[2025-07-27 16:04:39] 2025-07-27 20:03:56,906 | INFO     |  -- lfn=log.45743349._051170.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:04:39] 2025-07-27 20:03:56,906 | INFO     | stage-out finished correctly
[2025-07-27 16:04:39] 2025-07-27 20:03:58,359 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:04:39] 2025-07-27 20:03:58,544 | INFO     | monitor loop #339: job 0:6747499785 is in state 'finished'
[2025-07-27 16:04:39] 2025-07-27 20:03:58,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:04:39] 2025-07-27 20:04:01,047 | INFO     | monitor loop #340: job 0:6747499785 is in state 'finished'
[2025-07-27 16:04:39] 2025-07-27 20:04:01,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:04:39] 2025-07-27 20:04:01,364 | INFO     | job 6747499785 has state=finished
[2025-07-27 16:04:39] 2025-07-27 20:04:01,364 | INFO     | preparing for final server update for job 6747499785 in state='finished'
[2025-07-27 16:04:39] 2025-07-27 20:04:01,365 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:04:39] 2025-07-27 20:04:01,365 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:04:39] 2025-07-27 20:04:01,365 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:04:39] 2025-07-27 20:04:01,365 | INFO     | job 6747499785 has finished - writing final server update
[2025-07-27 16:04:39] 2025-07-27 20:04:01,365 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:04:39] 2025-07-27 20:04:01,366 | INFO     | executing command: lscpu
[2025-07-27 16:04:39] 2025-07-27 20:04:01,412 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:04:39] 2025-07-27 20:04:03,550 | INFO     | monitor loop #341: job 0:6747499785 is in state 'finished'
[2025-07-27 16:04:39] 2025-07-27 20:04:03,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,054 | INFO     | monitor loop #342: job 0:6747499785 is in state 'finished'
[2025-07-27 16:04:39] 2025-07-27 20:04:06,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,291 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 16:04:39] 2025-07-27 20:04:06,295 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2729.8599642857143
[2025-07-27 16:04:39] 2025-07-27 20:04:06,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747499785/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,305 | INFO     | extracted standard info from prmon json
[2025-07-27 16:04:39] 2025-07-27 20:04:06,305 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:04:39] 2025-07-27 20:04:06,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:04:39] 2025-07-27 20:04:06,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:04:39] 2025-07-27 20:04:06,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:04:39] 2025-07-27 20:04:06,307 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | sum of square deviations: 101843770.0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | sum of deviations: -12066079746.000002
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | mean x: 1753644418.0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | mean y: 2891433.3188405796
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | -- intersect: 207768308932.25632
[2025-07-27 16:04:39] 2025-07-27 20:04:06,308 | INFO     | intersect: 207768308932.25632
[2025-07-27 16:04:39] 2025-07-27 20:04:06,309 | INFO     | chi2: 0.10180877943610377
[2025-07-27 16:04:39] 2025-07-27 20:04:06,309 | INFO     | -- intersect: 207768308932.25632
[2025-07-27 16:04:39] 2025-07-27 20:04:06,309 | INFO     | current memory leak: -118.48 B/s (using 69 data points, chi2=0.10)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,309 | INFO     | could have reported an average CPU frequency of 2768 MHz (6 samples)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | ..............................
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . Timing measurements:
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . get job = 0 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . initial setup = 2 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . payload setup = 7 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . stage-in = 0 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . payload execution = 4597 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . stage-out = 0 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | . log creation = 0 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,310 | INFO     | ..............................
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | 
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | job summary report
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | --------------------------------------------------
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | PanDA job id: 6747499785
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | task id: 45743349
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | errors: (none)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | pilot state: finished 
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | transexitcode: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | exeerrorcode: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | exeerrordiag: 
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | exitcode: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | exitmsg: OK
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | cpuconsumptiontime: 47826 s
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | nevents: 400
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | neventsw: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | pid: 1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | pgrp: 1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | corecount: 12
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | event service: False
[2025-07-27 16:04:39] 2025-07-27 20:04:06,400 | INFO     | sizes: {0: 2397423, 5: 2397685, 11: 2397741, 4608: 2423793, 4609: 2423792, 4610: 2432846, 4611: 2433030, 4619: 2433224}
[2025-07-27 16:04:39] 2025-07-27 20:04:06,401 | INFO     | --------------------------------------------------
[2025-07-27 16:04:39] 2025-07-27 20:04:06,401 | INFO     | 
[2025-07-27 16:04:39] 2025-07-27 20:04:06,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 16:04:39] 2025-07-27 20:04:06,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:04:39] 2025-07-27 20:04:06,429 | INFO     | job 6747499785 has completed (purged errors)
[2025-07-27 16:04:39] 2025-07-27 20:04:06,429 | INFO     | overall cleanup function is called
[2025-07-27 16:04:39] 2025-07-27 20:04:07,437 | INFO     | --- collectZombieJob: --- 10, [1243571]
[2025-07-27 16:04:39] 2025-07-27 20:04:07,437 | INFO     | zombie collector waiting for pid 1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:07,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:04:39] 2025-07-27 20:04:07,437 | INFO     | collected zombie processes
[2025-07-27 16:04:39] 2025-07-27 20:04:07,437 | INFO     | will attempt to kill all subprocesses of pid=1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:07,675 | INFO     | process IDs to be killed: [1243571] (in reverse order)
[2025-07-27 16:04:39] 2025-07-27 20:04:07,753 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:04:39] 2025-07-27 20:04:07,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:04:39] 2025-07-27 20:04:07,763 | INFO     | did not find any defunct processes belonging to 1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:07,773 | INFO     | did not find any defunct processes belonging to 1243571
[2025-07-27 16:04:39] 2025-07-27 20:04:07,773 | INFO     | ready for new job
[2025-07-27 16:04:39] 2025-07-27 20:04:07,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:04:39] 2025-07-27 20:04:07,775 | INFO     | ***************************************
[2025-07-27 16:04:39] 2025-07-27 20:04:07,775 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:04:39] 2025-07-27 20:04:07,775 | INFO     | ***************************************
[2025-07-27 16:04:39] 2025-07-27 20:04:07,775 | INFO     | 
[2025-07-27 16:04:39] 2025-07-27 20:04:07,778 | INFO     | architecture information:
[2025-07-27 16:04:39] 2025-07-27 20:04:07,778 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:04:39] 2025-07-27 20:04:07,791 | INFO     | cat /etc/os-release:
[2025-07-27 16:04:39] NAME="CentOS Linux"
[2025-07-27 16:04:39] VERSION="7 (Core)"
[2025-07-27 16:04:39] ID="centos"
[2025-07-27 16:04:39] ID_LIKE="rhel fedora"
[2025-07-27 16:04:39] VERSION_ID="7"
[2025-07-27 16:04:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:04:39] ANSI_COLOR="0;31"
[2025-07-27 16:04:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:04:39] HOME_URL="https://www.centos.org/"
[2025-07-27 16:04:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:04:39] 
[2025-07-27 16:04:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:04:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:04:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:04:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:04:39] 
[2025-07-27 16:04:39] 2025-07-27 20:04:07,792 | INFO     | ***************************************
[2025-07-27 16:04:39] 2025-07-27 20:04:08,294 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 16:04:39] 2025-07-27 20:04:08,309 | INFO     | sufficient remaining disk space (75273076736 B)
[2025-07-27 16:04:39] 2025-07-27 20:04:08,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:04:39] 2025-07-27 20:04:08,310 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:04:39] 2025-07-27 20:04:08,310 | INFO     | update_server=False
[2025-07-27 16:04:39] 2025-07-27 20:04:08,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:04:39] 2025-07-27 20:04:08,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:04:39] 2025-07-27 20:04:08,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:04:39] 2025-07-27 20:04:08,557 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 16:04:39] 2025-07-27 20:04:08,557 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 16:04:39] 2025-07-27 20:04:08,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:04:39] 2025-07-27 20:04:08,557 | INFO     | will abort loop
[2025-07-27 16:04:39] 2025-07-27 20:04:08,615 | INFO     | all data control threads have been joined
[2025-07-27 16:04:39] 2025-07-27 20:04:08,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:04:39] 2025-07-27 20:04:08,988 | INFO     | all payload control threads have been joined
[2025-07-27 16:04:39] 2025-07-27 20:04:09,315 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,315 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,349 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,519 | INFO     | all job control threads have been joined
[2025-07-27 16:04:39] 2025-07-27 20:04:09,562 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,620 | INFO     | [data] control thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,881 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,899 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,941 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:09,993 | INFO     | [payload] control thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:10,261 | INFO     | [job] validate thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:10,316 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:10,524 | INFO     | [job] control thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:10,658 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:10,708 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:12,977 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:18,761 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:04:39] 2025-07-27 20:04:19,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:04:39] 2025-07-27 20:04:20,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049306900288)>', '<ExcThread(monitor, started 140048674580224)>']
[2025-07-27 16:04:39] 2025-07-27 20:04:25,259 | INFO     | all workflow threads have been joined
[2025-07-27 16:04:39] 2025-07-27 20:04:25,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:04:39] 2025-07-27 20:04:25,259 | INFO     | traces error code: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:25,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:04:39] 2025-07-27 20:04:39,281 | INFO     | PID=1237023 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:04:39] 2025-07-27 20:04:39,282 | INFO     | .. there are 14 such processes running
[2025-07-27 16:04:39] 2025-07-27 20:04:39,282 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:04:39] 2025-07-27 20:04:39,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:04:39] 2025-07-27 20:04:39,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:04:39] 2025-07-27 20:04:39,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:04:39] 2025-07-27 20:04:39,283 | INFO     | [monitor] control thread has ended
[2025-07-27 16:04:39] 2025-07-27 20:04:39,455 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:04:39] 2025-07-27 20:04:39,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:04:39] 2025-07-27 20:04:39,461 [wrapper] pilotpid: 1237023
[2025-07-27 16:04:39] 2025-07-27 20:04:39,464 [wrapper] Pilot exit status: 0
[2025-07-27 16:04:39] 2025-07-27 20:04:39,477 [wrapper] pandaids: 6747499785
[2025-07-27 16:04:39] 2025-07-27 20:04:39,544 [wrapper] cleanup supervisor_pilot 1486713 1237024
[2025-07-27 16:04:39] 2025-07-27 20:04:39,549 [wrapper] Test setup, not cleaning
[2025-07-27 16:04:39] 2025-07-27 20:04:39,552 [wrapper] apfmon messages muted
[2025-07-27 16:04:39] 2025-07-27 20:04:39,555 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:04:39] 2025-07-27 20:04:39,558 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:04:39]  *** Error codes and diagnostics ***
[2025-07-27 16:04:39]     "exeErrorCode": 0,
[2025-07-27 16:04:39]     "exeErrorDiag": "",
[2025-07-27 16:04:39]     "pilotErrorCode": 0,
[2025-07-27 16:04:39]     "pilotErrorDiag": "",
[2025-07-27 16:04:39]  *** Listing of results directory ***
[2025-07-27 16:04:39] total 434936
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:55 queuedata.json
[2025-07-27 16:04:39] -rwx------. 1 boincer umatlas     36292 Jul 27 10:56 runpilot2-wrapper.sh
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas       100 Jul 27 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:04:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 14:46 run_atlas
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas       105 Jul 27 14:46 job.xml
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas 228596229 Jul 27 14:46 EVNT.45743347._001906.pool.root.1
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:46 start_atlas.sh
[2025-07-27 16:04:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 14:46 shared
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 14:46 input.tar.gz
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas         0 Jul 27 14:46 boinc_lockfile
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 14:46 pandaJob.out
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas    980125 Jul 27 14:46 agis_schedconf.cvmfs.json
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas   1593052 Jul 27 14:46 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:04:39] drwx------. 4 boincer umatlas      4096 Jul 27 14:46 pilot3
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 16:02 init_data.xml
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas       530 Jul 27 16:03 boinc_task_state.xml
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas 211286127 Jul 27 16:03 HITS.45743349._051170.pool.root.1
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas      1040 Jul 27 16:03 memory_monitor_summary.json
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas    350858 Jul 27 16:03 log.45743349._051170.job.log.tgz.1
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas      7831 Jul 27 16:04 heartbeat.json
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 16:04 boinc_mmap_file
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas        27 Jul 27 16:04 wrapper_checkpoint.txt
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas        95 Jul 27 16:04 pilot_heartbeat.json
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas       823 Jul 27 16:04 pilotlog.txt
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas    456757 Jul 27 16:04 log.45743349._051170.job.log.1
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas       357 Jul 27 16:04 output.list
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas       620 Jul 27 16:04 runtime_log
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas    829440 Jul 27 16:04 result.tar.gz
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas       655 Jul 27 16:04 sV3KDmTyH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmbVLDmjj2Fpn.diag
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 16:04 runtime_log.err
[2025-07-27 16:04:39] -rw-r--r--. 1 boincer umatlas     21890 Jul 27 16:04 stderr.txt
[2025-07-27 16:04:39] HITS file was successfully produced:
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas 211286127 Jul 27 16:03 shared/HITS.pool.root.1
[2025-07-27 16:04:39]  *** Contents of shared directory: ***
[2025-07-27 16:04:39] total 430940
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas 228596229 Jul 27 14:46 ATLAS.root_0
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 14:46 start_atlas.sh
[2025-07-27 16:04:39] -rw-r--r--. 2 boincer umatlas    542901 Jul 27 14:46 input.tar.gz
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas 211286127 Jul 27 16:03 HITS.pool.root.1
[2025-07-27 16:04:39] -rw-------. 1 boincer umatlas    829440 Jul 27 16:04 result.tar.gz
16:04:40 (1233395): run_atlas exited; CPU time 47919.838441
16:04:40 (1233395): called boinc_finish(0)

</stderr_txt>
]]>

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