Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:05 (4177709): wrapper (7.7.26015): starting
13:34:05 (4177709): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:34:05] Arguments: --nthreads 8
[2025-07-27 13:34:05] Threads: 8
[2025-07-27 13:34:05] Checking for CVMFS
[2025-07-27 13:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:34:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:34:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:34:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:34:07] 2.13.0.0 558603 18688 431700 148819 3 344 20806879 32935937 22198 16776704 0 56258670 99.538 95856640 20337 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 13:34:07] CVMFS is ok
[2025-07-27 13:34:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:34:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:34:07] Further information can be found at the LHC@home message board.
[2025-07-27 13:34:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:34:07] Checking for apptainer binary...
[2025-07-27 13:34:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:34:07] Running /usr/bin/apptainer --version
[2025-07-27 13:34:07] apptainer version 1.4.1-1.el9
[2025-07-27 13:34:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:34:08] c6-6-8-3.aglt2.org
[2025-07-27 13:34:08] apptainer works
[2025-07-27 13:34:08] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:34:08] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:34:08] Starting ATLAS job with PandaID=6744950040
[2025-07-27 13:34:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:01:41]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:01:41] 2025-07-27 21:00:41,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:01:41] 2025-07-27 21:00:43,686 | INFO     | monitor loop #767: job 0:6744950040 is in state 'finished'
[2025-07-27 17:01:41] 2025-07-27 21:00:43,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 17:01:41] 2025-07-27 21:00:44,847 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 17:01:41] 2025-07-27 21:00:44,910 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2464.735802083334
[2025-07-27 17:01:41] 2025-07-27 21:00:44,980 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744950040/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 17:01:41] 2025-07-27 21:00:44,981 | INFO     | extracted standard info from prmon json
[2025-07-27 17:01:41] 2025-07-27 21:00:44,981 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:01:41] 2025-07-27 21:00:44,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:01:41] 2025-07-27 21:00:44,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:01:41] 2025-07-27 21:00:44,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:01:41] 2025-07-27 21:00:44,994 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:01:41] 2025-07-27 21:00:44,994 | INFO     | sum of square deviations: 2480593878.3549924
[2025-07-27 17:01:41] 2025-07-27 21:00:45,015 | INFO     | sum of deviations: 49070760209.189964
[2025-07-27 17:01:41] 2025-07-27 21:00:45,015 | INFO     | mean x: 1753643916.635
[2025-07-27 17:01:41] 2025-07-27 21:00:45,015 | INFO     | mean y: 2101594.03
[2025-07-27 17:01:41] 2025-07-27 21:00:45,016 | INFO     | -- intersect: -34688236423.96377
[2025-07-27 17:01:41] 2025-07-27 21:00:45,016 | INFO     | intersect: -34688236423.96377
[2025-07-27 17:01:41] 2025-07-27 21:00:45,016 | INFO     | chi2: 3.4264587210611754
[2025-07-27 17:01:41] 2025-07-27 21:00:45,065 | INFO     | sum of square deviations: 2299166153.2615514
[2025-07-27 17:01:41] 2025-07-27 21:00:45,067 | INFO     | sum of deviations: 60155775746.95388
[2025-07-27 17:01:41] 2025-07-27 21:00:45,067 | INFO     | mean x: 1753643764.1384616
[2025-07-27 17:01:41] 2025-07-27 21:00:45,067 | INFO     | mean y: 2110727.7794871796
[2025-07-27 17:01:41] 2025-07-27 21:00:45,067 | INFO     | -- intersect: -45880524098.72437
[2025-07-27 17:01:41] 2025-07-27 21:00:45,068 | INFO     | intersect: -45880524098.72437
[2025-07-27 17:01:41] 2025-07-27 21:00:45,068 | INFO     | chi2: 2.7544279398923015
[2025-07-27 17:01:41] 2025-07-27 21:00:45,068 | INFO     | current chi2=2.7544279398923015 (change=19.612983429164025 %)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,068 | INFO     | right removable region: 194
[2025-07-27 17:01:41] 2025-07-27 21:00:45,101 | INFO     | sum of square deviations: 2299149683.2615514
[2025-07-27 17:01:41] 2025-07-27 21:00:45,102 | INFO     | sum of deviations: 8024074127.892307
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | mean x: 1753644069.1384616
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | mean y: 2135926.041025641
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | -- intersect: -6118113706.746783
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | intersect: -6118113706.746783
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | chi2: 1.0490052232233564
[2025-07-27 17:01:41] 2025-07-27 21:00:45,103 | INFO     | current chi2=1.0490052232233564 (change=69.38514925700086 %)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,104 | INFO     | sum of square deviations: 2126822758.7157865
[2025-07-27 17:01:41] 2025-07-27 21:00:45,111 | INFO     | sum of deviations: -4730332445.568421
[2025-07-27 17:01:41] 2025-07-27 21:00:45,112 | INFO     | mean x: 1753644221.6210527
[2025-07-27 17:01:41] 2025-07-27 21:00:45,112 | INFO     | mean y: 2147147.2421052633
[2025-07-27 17:01:41] 2025-07-27 21:00:45,112 | INFO     | -- intersect: 3902481637.04534
[2025-07-27 17:01:41] 2025-07-27 21:00:45,112 | INFO     | intersect: 3902481637.04534
[2025-07-27 17:01:41] 2025-07-27 21:00:45,113 | INFO     | chi2: 0.8165629020043323
[2025-07-27 17:01:41] 2025-07-27 21:00:45,113 | INFO     | current chi2=0.8165629020043323 (change=22.158356895953414 %)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,113 | INFO     | left removable region: 20
[2025-07-27 17:01:41] 2025-07-27 21:00:45,114 | INFO     | sum of square deviations: 1633509046.9655113
[2025-07-27 17:01:41] 2025-07-27 21:00:45,115 | INFO     | sum of deviations: 5330195590.5862055
[2025-07-27 17:01:41] 2025-07-27 21:00:45,115 | INFO     | mean x: 1753644343.6206896
[2025-07-27 17:01:41] 2025-07-27 21:00:45,115 | INFO     | mean y: 2159605.114942529
[2025-07-27 17:01:41] 2025-07-27 21:00:45,115 | INFO     | -- intersect: -5720041545.339287
[2025-07-27 17:01:41] 2025-07-27 21:00:45,115 | INFO     | intersect: -5720041545.339287
[2025-07-27 17:01:41] 2025-07-27 21:00:45,116 | INFO     | chi2: 0.09798670531053172
[2025-07-27 17:01:41] 2025-07-27 21:00:45,116 | INFO     | -- intersect: -5720041545.339287
[2025-07-27 17:01:41] 2025-07-27 21:00:45,116 | INFO     | current memory leak: 3.26 B/s (using 174 data points, chi2=0.10)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,117 | INFO     | could have reported an average CPU frequency of 2497 MHz (10 samples)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,117 | INFO     | ..............................
[2025-07-27 17:01:41] 2025-07-27 21:00:45,117 | INFO     | . Timing measurements:
[2025-07-27 17:01:41] 2025-07-27 21:00:45,117 | INFO     | . get job = 0 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . initial setup = 5 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . payload setup = 44 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . stage-in = 0 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . payload execution = 12177 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . stage-out = 7 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | . log creation = 0 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,118 | INFO     | ..............................
[2025-07-27 17:01:41] 2025-07-27 21:00:45,537 | INFO     | 
[2025-07-27 17:01:41] 2025-07-27 21:00:45,537 | INFO     | job summary report
[2025-07-27 17:01:41] 2025-07-27 21:00:45,537 | INFO     | --------------------------------------------------
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | PanDA job id: 6744950040
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | task id: 45743349
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | errors: (none)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | pilot state: finished 
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | transexitcode: 0
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | exeerrorcode: 0
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | exeerrordiag: 
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | exitcode: 0
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | exitmsg: OK
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | cpuconsumptiontime: 54534 s
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | nevents: 400
[2025-07-27 17:01:41] 2025-07-27 21:00:45,538 | INFO     | neventsw: 0
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | pid: 4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | pgrp: 4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | corecount: 8
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | event service: False
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | sizes: {0: 2397247, 1: 2397331, 2: 2397530, 13: 2397530, 24: 2397586, 33: 2397876, 35: 2398060, 12228: 2427545, 12229: 2427544, 12237: 2436818, 12241: 2436874, 122
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | --------------------------------------------------
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | 
[2025-07-27 17:01:41] 2025-07-27 21:00:45,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 17:01:41] 2025-07-27 21:00:45,763 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:01:41] 2025-07-27 21:00:45,765 | INFO     | job 6744950040 has completed (purged errors)
[2025-07-27 17:01:41] 2025-07-27 21:00:45,766 | INFO     | overall cleanup function is called
[2025-07-27 17:01:41] 2025-07-27 21:00:46,800 | INFO     | --- collectZombieJob: --- 10, [4193495]
[2025-07-27 17:01:41] 2025-07-27 21:00:46,800 | INFO     | zombie collector waiting for pid 4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:46,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:01:41] 2025-07-27 21:00:46,800 | INFO     | collected zombie processes
[2025-07-27 17:01:41] 2025-07-27 21:00:46,800 | INFO     | will attempt to kill all subprocesses of pid=4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:49,408 | INFO     | process IDs to be killed: [4193495] (in reverse order)
[2025-07-27 17:01:41] 2025-07-27 21:00:49,611 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:01:41] 2025-07-27 21:00:49,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:01:41] 2025-07-27 21:00:49,644 | INFO     | did not find any defunct processes belonging to 4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:49,666 | INFO     | did not find any defunct processes belonging to 4193495
[2025-07-27 17:01:41] 2025-07-27 21:00:49,667 | INFO     | ready for new job
[2025-07-27 17:01:41] 2025-07-27 21:00:49,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:01:41] 2025-07-27 21:00:49,669 | INFO     | ***************************************
[2025-07-27 17:01:41] 2025-07-27 21:00:49,670 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:01:41] 2025-07-27 21:00:49,670 | INFO     | ***************************************
[2025-07-27 17:01:41] 2025-07-27 21:00:49,670 | INFO     | 
[2025-07-27 17:01:41] 2025-07-27 21:00:49,734 | INFO     | architecture information:
[2025-07-27 17:01:41] 2025-07-27 21:00:49,748 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:01:41] 2025-07-27 21:00:49,811 | INFO     | cat /etc/os-release:
[2025-07-27 17:01:41] NAME="CentOS Linux"
[2025-07-27 17:01:41] VERSION="7 (Core)"
[2025-07-27 17:01:41] ID="centos"
[2025-07-27 17:01:41] ID_LIKE="rhel fedora"
[2025-07-27 17:01:41] VERSION_ID="7"
[2025-07-27 17:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:01:41] ANSI_COLOR="0;31"
[2025-07-27 17:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:01:41] HOME_URL="https://www.centos.org/"
[2025-07-27 17:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:01:41] 
[2025-07-27 17:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:01:41] 
[2025-07-27 17:01:41] 2025-07-27 21:00:49,811 | INFO     | ***************************************
[2025-07-27 17:01:41] 2025-07-27 21:00:50,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 17:01:41] 2025-07-27 21:00:50,467 | INFO     | sufficient remaining disk space (95995035648 B)
[2025-07-27 17:01:41] 2025-07-27 21:00:50,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:01:41] 2025-07-27 21:00:50,468 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:01:41] 2025-07-27 21:00:50,468 | INFO     | update_server=False
[2025-07-27 17:01:41] 2025-07-27 21:00:50,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:01:41] 2025-07-27 21:00:50,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:01:41] 2025-07-27 21:00:50,470 | INFO     | aborting loop
[2025-07-27 17:01:41] 2025-07-27 21:00:50,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:01:41] 2025-07-27 21:00:50,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:01:41] 2025-07-27 21:00:50,912 | INFO     | all job control threads have been joined
[2025-07-27 17:01:41] 2025-07-27 21:00:51,010 | INFO     | all data control threads have been joined
[2025-07-27 17:01:41] 2025-07-27 21:00:51,223 | INFO     | all payload control threads have been joined
[2025-07-27 17:01:41] 2025-07-27 21:00:51,475 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,480 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,533 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,535 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,536 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,536 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,615 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,660 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:51,918 | INFO     | [job] control thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,023 | INFO     | [data] control thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,229 | INFO     | [payload] control thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,276 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,500 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,510 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,666 | INFO     | [job] validate thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:52,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:01:41] 2025-07-27 21:00:56,747 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:01:41] 2025-07-27 21:00:57,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904408803136)>', '<ExcThread(monitor, started 139903903975168)>']
[2025-07-27 17:01:41] 2025-07-27 21:01:02,997 | INFO     | all workflow threads have been joined
[2025-07-27 17:01:41] 2025-07-27 21:01:02,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:01:41] 2025-07-27 21:01:02,997 | INFO     | traces error code: 0
[2025-07-27 17:01:41] 2025-07-27 21:01:02,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:01:41] 2025-07-27 21:01:19,092 | INFO     | PID=4183191 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | INFO     | .. there are 32 such processes running
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:01:41] 2025-07-27 21:01:19,093 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 17:01:41] 2025-07-27 21:01:19,094 | INFO     | [monitor] control thread has ended
[2025-07-27 17:01:41] 2025-07-27 21:01:19,747 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:01:41] 2025-07-27 21:01:19,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:01:41] 2025-07-27 21:01:19,861 [wrapper] pilotpid: 4183191
[2025-07-27 17:01:41] 2025-07-27 21:01:19,892 [wrapper] Pilot exit status: 0
[2025-07-27 17:01:41] 2025-07-27 21:01:20,172 [wrapper] pandaids: 6744950040
[2025-07-27 17:01:41] 2025-07-27 21:01:21,231 [wrapper] cleanup supervisor_pilot  716220 4183192
[2025-07-27 17:01:41] 2025-07-27 21:01:21,242 [wrapper] Test setup, not cleaning
[2025-07-27 17:01:41] 2025-07-27 21:01:21,275 [wrapper] apfmon messages muted
[2025-07-27 17:01:41] 2025-07-27 21:01:21,324 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:01:41] 2025-07-27 21:01:21,353 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:01:41]  *** Error codes and diagnostics ***
[2025-07-27 17:01:41]     "exeErrorCode": 0,
[2025-07-27 17:01:41]     "exeErrorDiag": "",
[2025-07-27 17:01:41]     "pilotErrorCode": 0,
[2025-07-27 17:01:41]     "pilotErrorDiag": "",
[2025-07-27 17:01:41]  *** Listing of results directory ***
[2025-07-27 17:01:41] total 357240
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas    550332 Jun 18 11:33 pilot3.tar.gz
[2025-07-27 17:01:41] -rwx------. 1 boincer umatlas     36292 Jul 24 23:45 runpilot2-wrapper.sh
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 23:46 queuedata.json
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas       100 Jul 27 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:01:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 13:34 run_atlas
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas       105 Jul 27 13:34 job.xml
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas 148345096 Jul 27 13:34 EVNT.45743347._000869.pool.root.1
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:34 start_atlas.sh
[2025-07-27 17:01:41] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 13:34 shared
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas    564563 Jul 27 13:34 input.tar.gz
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas         0 Jul 27 13:34 boinc_lockfile
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 13:34 pandaJob.out
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas    980117 Jul 27 13:35 agis_schedconf.cvmfs.json
[2025-07-27 17:01:41] drwx------. 6 boincer umatlas      4096 Jul 27 13:35 pilot3
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas 210797502 Jul 27 16:59 HITS.45743349._015617.pool.root.1
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas       531 Jul 27 16:59 boinc_task_state.xml
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas      1040 Jul 27 16:59 memory_monitor_summary.json
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas   1593052 Jul 27 17:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas    363046 Jul 27 17:00 log.45743349._015617.job.log.tgz.1
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas        95 Jul 27 17:00 pilot_heartbeat.json
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas      7825 Jul 27 17:00 heartbeat.json
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas      6858 Jul 27 17:00 init_data.xml
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas       893 Jul 27 17:01 pilotlog.txt
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas   1015043 Jul 27 17:01 log.45743349._015617.job.log.1
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas       357 Jul 27 17:01 output.list
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas       620 Jul 27 17:01 runtime_log
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas   1392640 Jul 27 17:01 result.tar.gz
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas       655 Jul 27 17:01 x7cMDmkYOz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvdOLDmGvu1Tn.diag
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 17:01 runtime_log.err
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 17:01 boinc_mmap_file
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas        28 Jul 27 17:01 wrapper_checkpoint.txt
[2025-07-27 17:01:41] -rw-r--r--. 1 boincer umatlas     21258 Jul 27 17:01 stderr.txt
[2025-07-27 17:01:41] HITS file was successfully produced:
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas 210797502 Jul 27 16:59 shared/HITS.pool.root.1
[2025-07-27 17:01:41]  *** Contents of shared directory: ***
[2025-07-27 17:01:41] total 352668
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas 148345096 Jul 27 13:34 ATLAS.root_0
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:34 start_atlas.sh
[2025-07-27 17:01:41] -rw-r--r--. 2 boincer umatlas    564563 Jul 27 13:34 input.tar.gz
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas 210797502 Jul 27 16:59 HITS.pool.root.1
[2025-07-27 17:01:41] -rw-------. 1 boincer umatlas   1392640 Jul 27 17:01 result.tar.gz
17:01:43 (4177709): run_atlas exited; CPU time 55149.192327
17:01:43 (4177709): called boinc_finish(0)

</stderr_txt>
]]>

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