Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:36 (1464135): wrapper (7.7.26015): starting
13:19:36 (1464135): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:19:36] Arguments: --nthreads 8
[2025-07-27 13:19:36] Threads: 8
[2025-07-27 13:19:36] Checking for CVMFS
[2025-07-27 13:19:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:19:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:19:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:19:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:19:36] 2.12.6.0 4167112 18672 308968 148819 0 406 23288537 32935937 16911 16776704 1 100419521 99.674 167170148 16381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 13:19:36] CVMFS is ok
[2025-07-27 13:19:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:19:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:19:36] Further information can be found at the LHC@home message board.
[2025-07-27 13:19:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:19:36] Checking for apptainer binary...
[2025-07-27 13:19:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:19:36] Running /usr/bin/apptainer --version
[2025-07-27 13:19:36] apptainer version 1.4.1-1.el9
[2025-07-27 13:19:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:19:37] c7-16-8.aglt2.org
[2025-07-27 13:19:37] apptainer works
[2025-07-27 13:19:37] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:19:37] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:19:37] Starting ATLAS job with PandaID=6746818079
[2025-07-27 13:19:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:49:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:49:04] 2025-07-27 19:48:29,722 | INFO     | PID=1471340 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 15:49:04] 2025-07-27 19:48:29,724 | INFO     | .. there are 19 such processes running
[2025-07-27 15:49:04] 2025-07-27 19:48:29,957 | INFO     | monitor loop #620: job 0:6746818079 is in state 'finished'
[2025-07-27 15:49:04] 2025-07-27 19:48:29,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,652 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 15:49:04] 2025-07-27 19:48:31,673 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3039.4317499999993
[2025-07-27 15:49:04] 2025-07-27 19:48:31,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6746818079/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,688 | INFO     | extracted standard info from prmon json
[2025-07-27 15:49:04] 2025-07-27 19:48:31,688 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:49:04] 2025-07-27 19:48:31,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:49:04] 2025-07-27 19:48:31,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:49:04] 2025-07-27 19:48:31,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:49:04] 2025-07-27 19:48:31,691 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:49:04] 2025-07-27 19:48:31,693 | INFO     | sum of square deviations: 964976232.5
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | sum of deviations: -12769924646.999996
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | mean x: 1753641251.5
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | mean y: 2338775.164383562
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | -- intersect: 23208989763.354153
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | intersect: 23208989763.354153
[2025-07-27 15:49:04] 2025-07-27 19:48:31,694 | INFO     | chi2: 1.6906039654872782
[2025-07-27 15:49:04] 2025-07-27 19:48:31,695 | INFO     | sum of square deviations: 869188390.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,695 | INFO     | sum of deviations: -12123660086.000002
[2025-07-27 15:49:04] 2025-07-27 19:48:31,695 | INFO     | mean x: 1753641099.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,696 | INFO     | mean y: 2339817.7517730496
[2025-07-27 15:49:04] 2025-07-27 19:48:31,696 | INFO     | -- intersect: 24462570582.126663
[2025-07-27 15:49:04] 2025-07-27 19:48:31,696 | INFO     | intersect: 24462570582.126663
[2025-07-27 15:49:04] 2025-07-27 19:48:31,697 | INFO     | chi2: 1.6840091011769707
[2025-07-27 15:49:04] 2025-07-27 19:48:31,697 | INFO     | current chi2=1.6840091011769707 (change=0.39008924886833063 %)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,697 | INFO     | right removable region: 140
[2025-07-27 15:49:04] 2025-07-27 19:48:31,697 | INFO     | sum of square deviations: 869188390.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,698 | INFO     | sum of deviations: -32344628715.000004
[2025-07-27 15:49:04] 2025-07-27 19:48:31,698 | INFO     | mean x: 1753641404.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,698 | INFO     | mean y: 2369445.829787234
[2025-07-27 15:49:04] 2025-07-27 19:48:31,698 | INFO     | -- intersect: 65259660919.35179
[2025-07-27 15:49:04] 2025-07-27 19:48:31,698 | INFO     | intersect: 65259660919.35179
[2025-07-27 15:49:04] 2025-07-27 19:48:31,699 | INFO     | chi2: 0.2660363685263949
[2025-07-27 15:49:04] 2025-07-27 19:48:31,699 | INFO     | current chi2=0.2660363685263949 (change=84.26382677685747 %)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,699 | INFO     | sum of square deviations: 779958810.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,699 | INFO     | sum of deviations: -29563915502.500004
[2025-07-27 15:49:04] 2025-07-27 19:48:31,700 | INFO     | mean x: 1753641556.5
[2025-07-27 15:49:04] 2025-07-27 19:48:31,700 | INFO     | mean y: 2364629.742647059
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | -- intersect: 66473196336.91777
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | intersect: 66473196336.91777
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | chi2: 0.254910434287217
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | current chi2=0.254910434287217 (change=4.1821102508674635 %)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | left removable region: 20
[2025-07-27 15:49:04] 2025-07-27 19:48:31,701 | INFO     | sum of square deviations: 535786790.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | sum of deviations: -18199792860.0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | mean x: 1753641678.5
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | mean y: 2346089.816666667
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | -- intersect: 59570659260.364815
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | intersect: 59570659260.364815
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | chi2: 0.21724265763688305
[2025-07-27 15:49:04] 2025-07-27 19:48:31,702 | INFO     | -- intersect: 59570659260.364815
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | current memory leak: -33.97 B/s (using 120 data points, chi2=0.22)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | could have reported an average CPU frequency of 2999 MHz (8 samples)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | ..............................
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . Timing measurements:
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . get job = 0 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . initial setup = 3 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . payload setup = 10 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . stage-in = 0 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . payload execution = 8873 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,703 | INFO     | . stage-out = 0 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,704 | INFO     | . log creation = 0 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,704 | INFO     | ..............................
[2025-07-27 15:49:04] 2025-07-27 19:48:31,776 | INFO     | 
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | job summary report
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | --------------------------------------------------
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | PanDA job id: 6746818079
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | task id: 45758813
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | errors: (none)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | pilot state: finished 
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | transexitcode: 0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | exeerrorcode: 0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | exeerrordiag: 
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | exitcode: 0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | exitmsg: OK
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | cpuconsumptiontime: 43548 s
[2025-07-27 15:49:04] 2025-07-27 19:48:31,777 | INFO     | nevents: 400
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | neventsw: 0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | pid: 1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | pgrp: 1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | corecount: 8
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | event service: False
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | sizes: {0: 2397464, 7: 2397726, 11: 2397754, 8888: 2426043, 8890: 2435041, 8891: 2435097, 8901: 2435419}
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | --------------------------------------------------
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | 
[2025-07-27 15:49:04] 2025-07-27 19:48:31,778 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:49:04] 2025-07-27 19:48:31,809 | INFO     | job 6746818079 has completed (purged errors)
[2025-07-27 15:49:04] 2025-07-27 19:48:31,809 | INFO     | overall cleanup function is called
[2025-07-27 15:49:04] 2025-07-27 19:48:32,817 | INFO     | --- collectZombieJob: --- 10, [1487636]
[2025-07-27 15:49:04] 2025-07-27 19:48:32,817 | INFO     | zombie collector waiting for pid 1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:32,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:49:04] 2025-07-27 19:48:32,818 | INFO     | collected zombie processes
[2025-07-27 15:49:04] 2025-07-27 19:48:32,818 | INFO     | will attempt to kill all subprocesses of pid=1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:33,293 | INFO     | process IDs to be killed: [1487636] (in reverse order)
[2025-07-27 15:49:04] 2025-07-27 19:48:33,470 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:49:04] 2025-07-27 19:48:33,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:49:04] 2025-07-27 19:48:33,494 | INFO     | did not find any defunct processes belonging to 1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:33,514 | INFO     | did not find any defunct processes belonging to 1487636
[2025-07-27 15:49:04] 2025-07-27 19:48:33,514 | INFO     | ready for new job
[2025-07-27 15:49:04] 2025-07-27 19:48:33,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:49:04] 2025-07-27 19:48:33,516 | INFO     | ***************************************
[2025-07-27 15:49:04] 2025-07-27 19:48:33,517 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:49:04] 2025-07-27 19:48:33,517 | INFO     | ***************************************
[2025-07-27 15:49:04] 2025-07-27 19:48:33,517 | INFO     | 
[2025-07-27 15:49:04] 2025-07-27 19:48:33,523 | INFO     | architecture information:
[2025-07-27 15:49:04] 2025-07-27 19:48:33,523 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:49:04] 2025-07-27 19:48:33,553 | INFO     | cat /etc/os-release:
[2025-07-27 15:49:04] NAME="CentOS Linux"
[2025-07-27 15:49:04] VERSION="7 (Core)"
[2025-07-27 15:49:04] ID="centos"
[2025-07-27 15:49:04] ID_LIKE="rhel fedora"
[2025-07-27 15:49:04] VERSION_ID="7"
[2025-07-27 15:49:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:49:04] ANSI_COLOR="0;31"
[2025-07-27 15:49:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:49:04] HOME_URL="https://www.centos.org/"
[2025-07-27 15:49:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:49:04] 
[2025-07-27 15:49:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:49:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:49:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:49:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:49:04] 
[2025-07-27 15:49:04] 2025-07-27 19:48:33,553 | INFO     | ***************************************
[2025-07-27 15:49:04] 2025-07-27 19:48:34,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | INFO     | sufficient remaining disk space (75477549056 B)
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | INFO     | update_server=False
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:49:04] 2025-07-27 19:48:34,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:49:04] 2025-07-27 19:48:34,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:49:04] 2025-07-27 19:48:34,091 | INFO     | aborting loop
[2025-07-27 15:49:04] 2025-07-27 19:48:34,264 | INFO     | all job control threads have been joined
[2025-07-27 15:49:04] 2025-07-27 19:48:34,567 | INFO     | all data control threads have been joined
[2025-07-27 15:49:04] 2025-07-27 19:48:34,711 | INFO     | all payload control threads have been joined
[2025-07-27 15:49:04] 2025-07-27 19:48:35,093 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,096 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,258 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,269 | INFO     | [job] control thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,272 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,285 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,461 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,573 | INFO     | [data] control thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,716 | INFO     | [payload] control thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:35,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:36,095 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:36,275 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:36,376 | INFO     | [job] validate thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:36,556 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:36,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:49:04] 2025-07-27 19:48:36,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:49:04] 2025-07-27 19:48:37,796 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:40,737 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:49:04] 2025-07-27 19:48:42,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743107426112)>', '<ExcThread(monitor, started 139742381332224)>']
[2025-07-27 15:49:04] 2025-07-27 19:48:47,016 | INFO     | all workflow threads have been joined
[2025-07-27 15:49:04] 2025-07-27 19:48:47,017 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:49:04] 2025-07-27 19:48:47,017 | INFO     | traces error code: 0
[2025-07-27 15:49:04] 2025-07-27 19:48:47,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:49:04] 2025-07-27 19:49:04,345 | INFO     | PID=1471340 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 15:49:04] 2025-07-27 19:49:04,345 | INFO     | .. there are 19 such processes running
[2025-07-27 15:49:04] 2025-07-27 19:49:04,346 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:49:04] 2025-07-27 19:49:04,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:49:04] 2025-07-27 19:49:04,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:49:04] 2025-07-27 19:49:04,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:49:04] 2025-07-27 19:49:04,346 | INFO     | [monitor] control thread has ended
[2025-07-27 15:49:04] 2025-07-27 19:49:04,500 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:49:04] 2025-07-27 19:49:04,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:49:04] 2025-07-27 19:49:04,507 [wrapper] pilotpid: 1471340
[2025-07-27 15:49:04] 2025-07-27 19:49:04,510 [wrapper] Pilot exit status: 0
[2025-07-27 15:49:04] 2025-07-27 19:49:04,535 [wrapper] pandaids: 6746818079
[2025-07-27 15:49:04] 2025-07-27 19:49:04,650 [wrapper] cleanup supervisor_pilot 1961198 1471341
[2025-07-27 15:49:04] 2025-07-27 19:49:04,656 [wrapper] Test setup, not cleaning
[2025-07-27 15:49:04] 2025-07-27 19:49:04,664 [wrapper] apfmon messages muted
[2025-07-27 15:49:04] 2025-07-27 19:49:04,674 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:49:04] 2025-07-27 19:49:04,680 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:49:04]  *** Error codes and diagnostics ***
[2025-07-27 15:49:04]     "exeErrorCode": 0,
[2025-07-27 15:49:04]     "exeErrorDiag": "",
[2025-07-27 15:49:04]     "pilotErrorCode": 0,
[2025-07-27 15:49:04]     "pilotErrorDiag": "",
[2025-07-27 15:49:04]  *** Listing of results directory ***
[2025-07-27 15:49:04] total 409568
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 05:06 pilot3.tar.gz
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 05:11 queuedata.json
[2025-07-27 15:49:04] -rwx------. 1 boincer umatlas     36292 Jul 27 05:13 runpilot2-wrapper.sh
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:49:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 13:19 run_atlas
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 13:19 job.xml
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas 242442890 Jul 27 13:19 EVNT.45758811._000003.pool.root.1
[2025-07-27 15:49:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 13:19 shared
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas    542871 Jul 27 13:19 input.tar.gz
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:19 start_atlas.sh
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 13:19 boinc_lockfile
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 13:19 pandaJob.out
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas    980117 Jul 27 13:19 agis_schedconf.cvmfs.json
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 13:19 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:49:04] drwx------. 4 boincer umatlas      4096 Jul 27 13:19 pilot3
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 15:36 init_data.xml
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas 170743225 Jul 27 15:47 HITS.45758813._000064.pool.root.1
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas       529 Jul 27 15:47 boinc_task_state.xml
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas      1036 Jul 27 15:48 memory_monitor_summary.json
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas    346928 Jul 27 15:48 log.45758813._000064.job.log.tgz.1
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas        95 Jul 27 15:48 pilot_heartbeat.json
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas      7763 Jul 27 15:48 heartbeat.json
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 15:49 boinc_mmap_file
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas        27 Jul 27 15:49 wrapper_checkpoint.txt
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas       823 Jul 27 15:49 pilotlog.txt
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas    818346 Jul 27 15:49 log.45758813._000064.job.log.1
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas       357 Jul 27 15:49 output.list
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas       620 Jul 27 15:49 runtime_log
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas   1187840 Jul 27 15:49 result.tar.gz
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 15:49 runtime_log.err
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas       654 Jul 27 15:49 9fmLDm7cC07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmssULDmSx6yom.diag
[2025-07-27 15:49:04] -rw-r--r--. 1 boincer umatlas     21238 Jul 27 15:49 stderr.txt
[2025-07-27 15:49:04] HITS file was successfully produced:
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas 170743225 Jul 27 15:47 shared/HITS.pool.root.1
[2025-07-27 15:49:04]  *** Contents of shared directory: ***
[2025-07-27 15:49:04] total 405224
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas 242442890 Jul 27 13:19 ATLAS.root_0
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas    542871 Jul 27 13:19 input.tar.gz
[2025-07-27 15:49:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:19 start_atlas.sh
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas 170743225 Jul 27 15:47 HITS.pool.root.1
[2025-07-27 15:49:04] -rw-------. 1 boincer umatlas   1187840 Jul 27 15:49 result.tar.gz
15:49:06 (1464135): run_atlas exited; CPU time 43844.955791
15:49:06 (1464135): called boinc_finish(0)

</stderr_txt>
]]>

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