Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:23:42 (2520316): wrapper (7.7.26015): starting
13:23:42 (2520316): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:23:42] Arguments: --nthreads 8
[2025-07-27 13:23:42] Threads: 8
[2025-07-27 13:23:42] Checking for CVMFS
[2025-07-27 13:23:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:23:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:23:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:23:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:23:44] 2.13.0.0 97685 27530 406276 148819 1 104 25499192 32935937 19807 16776704 0 64783965 99.610 102891070 29515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 13:23:44] CVMFS is ok
[2025-07-27 13:23:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:23:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:23:44] Further information can be found at the LHC@home message board.
[2025-07-27 13:23:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:23:44] Checking for apptainer binary...
[2025-07-27 13:23:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:23:44] Running /usr/bin/apptainer --version
[2025-07-27 13:23:44] apptainer version 1.4.1-1.el9
[2025-07-27 13:23:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:23:45] c6-4-5-1.aglt2.org
[2025-07-27 13:23:45] apptainer works
[2025-07-27 13:23:45] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:23:45] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:23:45] Starting ATLAS job with PandaID=6747376544
[2025-07-27 13:23:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:13:50]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:13:50] 2025-07-27 22:13:13,313 | INFO     | monitor loop #1018: job 0:6747376544 is in state 'finished'
[2025-07-27 18:13:50] 2025-07-27 22:13:13,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,646 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 18:13:50] 2025-07-27 22:13:15,650 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2771.2148593750003
[2025-07-27 18:13:50] 2025-07-27 22:13:15,670 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747376544/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,671 | INFO     | extracted standard info from prmon json
[2025-07-27 18:13:50] 2025-07-27 22:13:15,671 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:13:50] 2025-07-27 22:13:15,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:13:50] 2025-07-27 22:13:15,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:13:50] 2025-07-27 22:13:15,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:13:50] 2025-07-27 22:13:15,685 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:13:50] 2025-07-27 22:13:15,686 | INFO     | sum of square deviations: 6952914556.01771
[2025-07-27 18:13:50] 2025-07-27 22:13:15,692 | INFO     | sum of deviations: -55303571643.95744
[2025-07-27 18:13:50] 2025-07-27 22:13:15,692 | INFO     | mean x: 1753645782.8971632
[2025-07-27 18:13:50] 2025-07-27 22:13:15,693 | INFO     | mean y: 2144433.5531914895
[2025-07-27 18:13:50] 2025-07-27 22:13:15,693 | INFO     | -- intersect: 13950665504.99926
[2025-07-27 18:13:50] 2025-07-27 22:13:15,693 | INFO     | intersect: 13950665504.99926
[2025-07-27 18:13:50] 2025-07-27 22:13:15,693 | INFO     | chi2: 3.2242599361365016
[2025-07-27 18:13:50] 2025-07-27 22:13:15,694 | INFO     | sum of square deviations: 6589583762.714821
[2025-07-27 18:13:50] 2025-07-27 22:13:15,695 | INFO     | sum of deviations: -33423171653.56677
[2025-07-27 18:13:50] 2025-07-27 22:13:15,700 | INFO     | mean x: 1753645630.4043322
[2025-07-27 18:13:50] 2025-07-27 22:13:15,700 | INFO     | mean y: 2153534.6389891696
[2025-07-27 18:13:50] 2025-07-27 22:13:15,700 | INFO     | -- intersect: 8896857818.72017
[2025-07-27 18:13:50] 2025-07-27 22:13:15,700 | INFO     | intersect: 8896857818.72017
[2025-07-27 18:13:50] 2025-07-27 22:13:15,701 | INFO     | chi2: 2.5648456263294874
[2025-07-27 18:13:50] 2025-07-27 22:13:15,701 | INFO     | current chi2=2.5648456263294874 (change=20.451648529217632 %)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,701 | INFO     | right removable region: 276
[2025-07-27 18:13:50] 2025-07-27 22:13:15,701 | INFO     | sum of square deviations: 6589532522.519862
[2025-07-27 18:13:50] 2025-07-27 22:13:15,703 | INFO     | sum of deviations: -99909224211.61734
[2025-07-27 18:13:50] 2025-07-27 22:13:15,703 | INFO     | mean x: 1753645935.400722
[2025-07-27 18:13:50] 2025-07-27 22:13:15,703 | INFO     | mean y: 2163049.086642599
[2025-07-27 18:13:50] 2025-07-27 22:13:15,703 | INFO     | -- intersect: 26590605301.85254
[2025-07-27 18:13:50] 2025-07-27 22:13:15,708 | INFO     | intersect: 26590605301.85254
[2025-07-27 18:13:50] 2025-07-27 22:13:15,708 | INFO     | chi2: 1.4911728134018234
[2025-07-27 18:13:50] 2025-07-27 22:13:15,708 | INFO     | current chi2=1.4911728134018234 (change=53.751470323802906 %)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,709 | INFO     | sum of square deviations: 6239102160.691141
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | sum of deviations: -105790243912.08087
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | mean x: 1753646087.889706
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | mean y: 2165581.8639705884
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | -- intersect: 29736996426.943035
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | intersect: 29736996426.943035
[2025-07-27 18:13:50] 2025-07-27 22:13:15,711 | INFO     | chi2: 1.3985432169121181
[2025-07-27 18:13:50] 2025-07-27 22:13:15,714 | INFO     | current chi2=1.3985432169121181 (change=6.211861942304909 %)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,714 | INFO     | left removable region: 20
[2025-07-27 18:13:50] 2025-07-27 22:13:15,714 | INFO     | sum of square deviations: 5201538760.484375
[2025-07-27 18:13:50] 2025-07-27 22:13:15,716 | INFO     | sum of deviations: -59700064200.33594
[2025-07-27 18:13:50] 2025-07-27 22:13:15,716 | INFO     | mean x: 1753646209.8828125
[2025-07-27 18:13:50] 2025-07-27 22:13:15,716 | INFO     | mean y: 2163757.35546875
[2025-07-27 18:13:50] 2025-07-27 22:13:15,716 | INFO     | -- intersect: 20129436884.688766
[2025-07-27 18:13:50] 2025-07-27 22:13:15,716 | INFO     | intersect: 20129436884.688766
[2025-07-27 18:13:50] 2025-07-27 22:13:15,717 | INFO     | chi2: 0.632359242913825
[2025-07-27 18:13:50] 2025-07-27 22:13:15,717 | INFO     | -- intersect: 20129436884.688766
[2025-07-27 18:13:50] 2025-07-27 22:13:15,717 | INFO     | current memory leak: -11.48 B/s (using 256 data points, chi2=0.63)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,722 | INFO     | could have reported an average CPU frequency of 2782 MHz (13 samples)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,722 | INFO     | ..............................
[2025-07-27 18:13:50] 2025-07-27 22:13:15,722 | INFO     | . Timing measurements:
[2025-07-27 18:13:50] 2025-07-27 22:13:15,722 | INFO     | . get job = 0 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . initial setup = 4 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . payload setup = 37 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . stage-in = 0 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . payload execution = 17181 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . stage-out = 3 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | . log creation = 0 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,725 | INFO     | ..............................
[2025-07-27 18:13:50] 2025-07-27 22:13:15,880 | INFO     | 
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | job summary report
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | --------------------------------------------------
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | PanDA job id: 6747376544
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | task id: 45743349
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | errors: (none)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:13:50] 2025-07-27 22:13:15,885 | INFO     | pilot state: finished 
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | transexitcode: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | exeerrorcode: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | exeerrordiag: 
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | exitcode: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | exitmsg: OK
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | cpuconsumptiontime: 47671 s
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | nevents: 400
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | neventsw: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | pid: 2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | pgrp: 2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | corecount: 8
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | event service: False
[2025-07-27 18:13:50] 2025-07-27 22:13:15,886 | INFO     | sizes: {0: 2397304, 1: 2397304, 2: 2397531, 3: 2397531, 13: 2397559, 21: 2397877, 25: 2398033, 17224: 2429948, 17228: 2438946, 17229: 2439002, 17246: 2439196}
[2025-07-27 18:13:50] 2025-07-27 22:13:15,887 | INFO     | --------------------------------------------------
[2025-07-27 18:13:50] 2025-07-27 22:13:15,887 | INFO     | 
[2025-07-27 18:13:50] 2025-07-27 22:13:15,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:13:50] 2025-07-27 22:13:15,929 | INFO     | job 6747376544 has completed (purged errors)
[2025-07-27 18:13:50] 2025-07-27 22:13:15,929 | INFO     | overall cleanup function is called
[2025-07-27 18:13:50] 2025-07-27 22:13:16,941 | INFO     | --- collectZombieJob: --- 10, [2545152]
[2025-07-27 18:13:50] 2025-07-27 22:13:16,941 | INFO     | zombie collector waiting for pid 2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:16,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:13:50] 2025-07-27 22:13:16,941 | INFO     | collected zombie processes
[2025-07-27 18:13:50] 2025-07-27 22:13:16,941 | INFO     | will attempt to kill all subprocesses of pid=2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:17,462 | INFO     | process IDs to be killed: [2545152] (in reverse order)
[2025-07-27 18:13:50] 2025-07-27 22:13:17,629 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:13:50] 2025-07-27 22:13:17,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:13:50] 2025-07-27 22:13:17,669 | INFO     | did not find any defunct processes belonging to 2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:17,684 | INFO     | did not find any defunct processes belonging to 2545152
[2025-07-27 18:13:50] 2025-07-27 22:13:17,684 | INFO     | ready for new job
[2025-07-27 18:13:50] 2025-07-27 22:13:17,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:13:50] 2025-07-27 22:13:17,686 | INFO     | ***************************************
[2025-07-27 18:13:50] 2025-07-27 22:13:17,686 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:13:50] 2025-07-27 22:13:17,686 | INFO     | ***************************************
[2025-07-27 18:13:50] 2025-07-27 22:13:17,686 | INFO     | 
[2025-07-27 18:13:50] 2025-07-27 22:13:17,703 | INFO     | architecture information:
[2025-07-27 18:13:50] 2025-07-27 22:13:17,715 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:13:50] 2025-07-27 22:13:17,841 | INFO     | cat /etc/os-release:
[2025-07-27 18:13:50] NAME="CentOS Linux"
[2025-07-27 18:13:50] VERSION="7 (Core)"
[2025-07-27 18:13:50] ID="centos"
[2025-07-27 18:13:50] ID_LIKE="rhel fedora"
[2025-07-27 18:13:50] VERSION_ID="7"
[2025-07-27 18:13:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:13:50] ANSI_COLOR="0;31"
[2025-07-27 18:13:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:13:50] HOME_URL="https://www.centos.org/"
[2025-07-27 18:13:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:13:50] 
[2025-07-27 18:13:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:13:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:13:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:13:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:13:50] 
[2025-07-27 18:13:50] 2025-07-27 22:13:17,841 | INFO     | ***************************************
[2025-07-27 18:13:50] 2025-07-27 22:13:18,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 18:13:50] 2025-07-27 22:13:18,365 | INFO     | sufficient remaining disk space (76154929152 B)
[2025-07-27 18:13:50] 2025-07-27 22:13:18,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:13:50] 2025-07-27 22:13:18,366 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:13:50] 2025-07-27 22:13:18,366 | INFO     | update_server=False
[2025-07-27 18:13:50] 2025-07-27 22:13:18,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:13:50] 2025-07-27 22:13:18,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:13:50] 2025-07-27 22:13:18,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:13:50] 2025-07-27 22:13:18,765 | INFO     | all data control threads have been joined
[2025-07-27 18:13:50] 2025-07-27 22:13:19,095 | INFO     | all job control threads have been joined
[2025-07-27 18:13:50] 2025-07-27 22:13:19,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:13:50] 2025-07-27 22:13:19,347 | INFO     | aborting loop
[2025-07-27 18:13:50] 2025-07-27 22:13:19,373 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:19,378 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:19,382 | INFO     | all payload control threads have been joined
[2025-07-27 18:13:50] 2025-07-27 22:13:19,771 | INFO     | [data] control thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:19,936 | INFO     | [job] validate thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:19,974 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,101 | INFO     | [job] control thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,356 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,374 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,388 | INFO     | [payload] control thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,399 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,431 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,584 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,590 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:20,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:13:50] 2025-07-27 22:13:21,857 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:22,378 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:28,665 | INFO     | job.realtimelogging is not enabled
[2025-07-27 18:13:50] 2025-07-27 22:13:29,671 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:13:50] 2025-07-27 22:13:31,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623713032000)>', '<ExcThread(monitor, started 140622983845632)>']
[2025-07-27 18:13:50] 2025-07-27 22:13:36,444 | INFO     | all workflow threads have been joined
[2025-07-27 18:13:50] 2025-07-27 22:13:36,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:13:50] 2025-07-27 22:13:36,444 | INFO     | traces error code: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:36,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:13:50] 2025-07-27 22:13:49,546 | INFO     | PID=2529231 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:13:50] 2025-07-27 22:13:49,547 | INFO     | .. there are 32 such processes running
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 18:13:50] 2025-07-27 22:13:49,549 | INFO     | [monitor] control thread has ended
[2025-07-27 18:13:50] 2025-07-27 22:13:49,766 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:13:50] 2025-07-27 22:13:49,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:13:50] 2025-07-27 22:13:49,772 [wrapper] pilotpid: 2529231
[2025-07-27 18:13:50] 2025-07-27 22:13:49,776 [wrapper] Pilot exit status: 0
[2025-07-27 18:13:50] 2025-07-27 22:13:49,806 [wrapper] pandaids: 6747376544
[2025-07-27 18:13:50] 2025-07-27 22:13:49,943 [wrapper] cleanup supervisor_pilot  156777 2529232
[2025-07-27 18:13:50] 2025-07-27 22:13:49,948 [wrapper] Test setup, not cleaning
[2025-07-27 18:13:50] 2025-07-27 22:13:49,954 [wrapper] apfmon messages muted
[2025-07-27 18:13:50] 2025-07-27 22:13:49,974 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:13:50] 2025-07-27 22:13:50,013 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:13:50]  *** Error codes and diagnostics ***
[2025-07-27 18:13:50]     "exeErrorCode": 0,
[2025-07-27 18:13:50]     "exeErrorDiag": "",
[2025-07-27 18:13:50]     "pilotErrorCode": 0,
[2025-07-27 18:13:50]     "pilotErrorDiag": "",
[2025-07-27 18:13:50]  *** Listing of results directory ***
[2025-07-27 18:13:50] total 351304
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 18:13:50] -rwx------. 1 boincer umatlas     36292 Jul 27 07:45 runpilot2-wrapper.sh
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:45 queuedata.json
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas       100 Jul 27 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:13:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 13:23 run_atlas
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas       105 Jul 27 13:23 job.xml
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas 145843090 Jul 27 13:23 EVNT.45743347._002650.pool.root.1
[2025-07-27 18:13:50] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 13:23 shared
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 13:23 input.tar.gz
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:23 start_atlas.sh
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas         0 Jul 27 13:23 boinc_lockfile
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 13:23 pandaJob.out
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas    980117 Jul 27 13:24 agis_schedconf.cvmfs.json
[2025-07-27 18:13:50] drwx------. 4 boincer umatlas      4096 Jul 27 13:25 pilot3
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 18:12 init_data.xml
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas 206486316 Jul 27 18:12 HITS.45743349._047753.pool.root.1
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas       531 Jul 27 18:12 boinc_task_state.xml
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas      1055 Jul 27 18:12 memory_monitor_summary.json
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:12 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas    411166 Jul 27 18:12 log.45743349._047753.job.log.tgz.1
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas      7827 Jul 27 18:13 heartbeat.json
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 18:13 boinc_mmap_file
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas        28 Jul 27 18:13 wrapper_checkpoint.txt
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas        95 Jul 27 18:13 pilot_heartbeat.json
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas       893 Jul 27 18:13 pilotlog.txt
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas   1364379 Jul 27 18:13 log.45743349._047753.job.log.1
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas       357 Jul 27 18:13 output.list
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas       620 Jul 27 18:13 runtime_log
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas   1792000 Jul 27 18:13 result.tar.gz
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 18:13 runtime_log.err
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas       656 Jul 27 18:13 qd2NDmP0E07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQ9ULDmSuulkm.diag
[2025-07-27 18:13:50] -rw-r--r--. 1 boincer umatlas      2143 Jul 27 18:13 stderr.txt
[2025-07-27 18:13:50] HITS file was successfully produced:
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas 206486316 Jul 27 18:12 shared/HITS.pool.root.1
[2025-07-27 18:13:50]  *** Contents of shared directory: ***
[2025-07-27 18:13:50] total 346380
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas 145843090 Jul 27 13:23 ATLAS.root_0
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 13:23 input.tar.gz
[2025-07-27 18:13:50] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 13:23 start_atlas.sh
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas 206486316 Jul 27 18:12 HITS.pool.root.1
[2025-07-27 18:13:50] -rw-------. 1 boincer umatlas   1792000 Jul 27 18:13 result.tar.gz
18:13:51 (2520316): run_atlas exited; CPU time 48295.413241
18:13:51 (2520316): called boinc_finish(0)

</stderr_txt>
]]>

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