Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:12:56 (3404871): wrapper (7.7.26015): starting
08:12:56 (3404871): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 08:12:56] Arguments: --nthreads 3
[2025-07-28 08:12:56] Threads: 3
[2025-07-28 08:12:56] Checking for CVMFS
[2025-07-28 08:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 08:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 08:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 08:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 08:12:56] 2.9.2.0 1932972 5208 85848 148838 0 57 36693576 36864000 0 130560 0 3916513 99.990 184389 1425 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 08:12:56] CVMFS is ok
[2025-07-28 08:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 08:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 08:12:56] Further information can be found at the LHC@home message board.
[2025-07-28 08:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 08:12:56] Checking for apptainer binary...
[2025-07-28 08:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 08:12:56] Running /usr/bin/apptainer --version
[2025-07-28 08:12:56] apptainer version 1.3.6-6.1
[2025-07-28 08:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 08:12:56] atlasA303a
[2025-07-28 08:12:56] apptainer works
[2025-07-28 08:12:56] Set ATHENA_PROC_NUMBER=3
[2025-07-28 08:12:56] Set ATHENA_CORE_NUMBER=3
[2025-07-28 08:12:56] Starting ATLAS job with PandaID=6747410183
[2025-07-28 08:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:48:13]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:48:13]  lfn=log.45743349._047891.job.log.tgz.1
[2025-07-28 09:48:13]  mtime=0
[2025-07-28 09:48:13]  protocol_id=None
[2025-07-28 09:48:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 09:48:13]  replicas=None
[2025-07-28 09:48:13]  scope=mc23_13p6TeV
[2025-07-28 09:48:13]  status=None
[2025-07-28 09:48:13]  status_code=0
[2025-07-28 09:48:13]  storage_token=
[2025-07-28 09:48:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747410183/log.45743349._047891.job.log.tgz.1
[2025-07-28 09:48:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/ba/log.45743349._047891.job.log.tgz.1
[2025-07-28 09:48:13]  workdir=None
[2025-07-28 09:48:13] ]
[2025-07-28 09:48:13] 2025-07-28 07:47:34,624 | INFO     | transferring file log.45743349._047891.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747410183/log.45743349._047891.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 09:48:13] 2025-07-28 07:47:34,624 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747410183/log.45743349._047891.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0478
[2025-07-28 09:48:13] 2025-07-28 07:47:34,637 | INFO     | adding to output.list: log.45743349._047891.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/ba/log.45743349._047891.job.log.tg
[2025-07-28 09:48:13] 2025-07-28 07:47:34,638 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 09:48:13] 2025-07-28 07:47:34,638 | INFO     | summary of transferred files:
[2025-07-28 09:48:13] 2025-07-28 07:47:34,638 | INFO     |  -- lfn=log.45743349._047891.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 09:48:13] 2025-07-28 07:47:34,638 | INFO     | stage-out finished correctly
[2025-07-28 09:48:13] 2025-07-28 07:47:36,642 | INFO     | monitor loop #438: job 0:6747410183 is in state 'finished'
[2025-07-28 09:48:13] 2025-07-28 07:47:36,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:48:13] 2025-07-28 07:47:37,887 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 09:48:13] 2025-07-28 07:47:39,147 | INFO     | monitor loop #439: job 0:6747410183 is in state 'finished'
[2025-07-28 09:48:13] 2025-07-28 07:47:39,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:48:13] 2025-07-28 07:47:39,767 | INFO     | job 6747410183 has state=finished
[2025-07-28 09:48:13] 2025-07-28 07:47:39,767 | INFO     | preparing for final server update for job 6747410183 in state='finished'
[2025-07-28 09:48:13] 2025-07-28 07:47:39,767 | INFO     | this job has now completed (state=finished)
[2025-07-28 09:48:13] 2025-07-28 07:47:39,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 09:48:13] 2025-07-28 07:47:39,768 | INFO     | log transfer has been attempted: DONE
[2025-07-28 09:48:13] 2025-07-28 07:47:39,768 | INFO     | job 6747410183 has finished - writing final server update
[2025-07-28 09:48:13] 2025-07-28 07:47:39,768 | INFO     | total number of processed events: 400 (read)
[2025-07-28 09:48:13] 2025-07-28 07:47:39,769 | INFO     | executing command: lscpu
[2025-07-28 09:48:13] 2025-07-28 07:47:39,785 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 09:48:13] 2025-07-28 07:47:41,650 | INFO     | monitor loop #440: job 0:6747410183 is in state 'finished'
[2025-07-28 09:48:13] 2025-07-28 07:47:41,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,181 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 09:48:13] 2025-07-28 07:47:42,182 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3738.049583333333
[2025-07-28 09:48:13] 2025-07-28 07:47:42,183 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747410183/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,184 | INFO     | extracted standard info from prmon json
[2025-07-28 09:48:13] 2025-07-28 07:47:42,184 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 09:48:13] 2025-07-28 07:47:42,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 09:48:13] 2025-07-28 07:47:42,184 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 09:48:13] 2025-07-28 07:47:42,184 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | sum of square deviations: 197203697.5
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | sum of deviations: -3917127962.500001
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | mean x: 1753686099.5
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | mean y: 2426555.3139534886
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | -- intersect: 34836524216.18063
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | intersect: 34836524216.18063
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | chi2: 0.019780248368056984
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | -- intersect: 34836524216.18063
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | current memory leak: -19.86 B/s (using 86 data points, chi2=0.02)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | could have reported an average CPU frequency of 3963 MHz (7 samples)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | ..............................
[2025-07-28 09:48:13] 2025-07-28 07:47:42,185 | INFO     | . Timing measurements:
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . get job = 0 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . initial setup = 1 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . payload setup = 3 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . stage-in = 0 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . payload execution = 5651 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . stage-out = 0 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | . log creation = 0 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,186 | INFO     | ..............................
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | 
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | job summary report
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | --------------------------------------------------
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | PanDA job id: 6747410183
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | task id: 45743349
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | errors: (none)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | pilot state: finished 
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | transexitcode: 0
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | exeerrorcode: 0
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | exeerrordiag: 
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | exitcode: 0
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | exitmsg: OK
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | cpuconsumptiontime: 16315 s
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | nevents: 400
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | neventsw: 0
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | pid: 3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:42,216 | INFO     | pgrp: 3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | corecount: 3
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | event service: False
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | sizes: {0: 2397428, 2: 2397690, 10: 2397718, 5658: 2424527, 5659: 2433531, 5662: 2433587, 5666: 2433909}
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | --------------------------------------------------
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | 
[2025-07-28 09:48:13] 2025-07-28 07:47:42,217 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 09:48:13] 2025-07-28 07:47:42,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | job 6747410183 has completed (purged errors)
[2025-07-28 09:48:13] 2025-07-28 07:47:42,230 | INFO     | overall cleanup function is called
[2025-07-28 09:48:13] 2025-07-28 07:47:43,237 | INFO     | --- collectZombieJob: --- 10, [3415015]
[2025-07-28 09:48:13] 2025-07-28 07:47:43,237 | INFO     | zombie collector waiting for pid 3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:43,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:48:13] 2025-07-28 07:47:43,237 | INFO     | collected zombie processes
[2025-07-28 09:48:13] 2025-07-28 07:47:43,237 | INFO     | will attempt to kill all subprocesses of pid=3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:43,278 | INFO     | process IDs to be killed: [3415015] (in reverse order)
[2025-07-28 09:48:13] 2025-07-28 07:47:43,303 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:48:13] 2025-07-28 07:47:43,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:48:13] 2025-07-28 07:47:43,304 | INFO     | did not find any defunct processes belonging to 3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:43,305 | INFO     | did not find any defunct processes belonging to 3415015
[2025-07-28 09:48:13] 2025-07-28 07:47:43,305 | INFO     | ready for new job
[2025-07-28 09:48:13] 2025-07-28 07:47:43,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:48:13] 2025-07-28 07:47:43,306 | INFO     | ***************************************
[2025-07-28 09:48:13] 2025-07-28 07:47:43,306 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:48:13] 2025-07-28 07:47:43,306 | INFO     | ***************************************
[2025-07-28 09:48:13] 2025-07-28 07:47:43,306 | INFO     | 
[2025-07-28 09:48:13] 2025-07-28 07:47:43,306 | INFO     | architecture information:
[2025-07-28 09:48:13] 2025-07-28 07:47:43,307 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:48:13] 2025-07-28 07:47:43,316 | INFO     | cat /etc/os-release:
[2025-07-28 09:48:13] NAME="CentOS Linux"
[2025-07-28 09:48:13] VERSION="7 (Core)"
[2025-07-28 09:48:13] ID="centos"
[2025-07-28 09:48:13] ID_LIKE="rhel fedora"
[2025-07-28 09:48:13] VERSION_ID="7"
[2025-07-28 09:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:48:13] ANSI_COLOR="0;31"
[2025-07-28 09:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:48:13] HOME_URL="https://www.centos.org/"
[2025-07-28 09:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:48:13] 
[2025-07-28 09:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:48:13] 
[2025-07-28 09:48:13] 2025-07-28 07:47:43,316 | INFO     | ***************************************
[2025-07-28 09:48:13] 2025-07-28 07:47:43,819 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | INFO     | sufficient remaining disk space (364190367744 B)
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | INFO     | update_server=False
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:48:13] 2025-07-28 07:47:43,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:48:13] 2025-07-28 07:47:43,848 | INFO     | all job control threads have been joined
[2025-07-28 09:48:13] 2025-07-28 07:47:43,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:48:13] 2025-07-28 07:47:44,049 | INFO     | all data control threads have been joined
[2025-07-28 09:48:13] 2025-07-28 07:47:44,154 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 09:48:13] 2025-07-28 07:47:44,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 09:48:13] 2025-07-28 07:47:44,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:48:13] 2025-07-28 07:47:44,154 | INFO     | will abort loop
[2025-07-28 09:48:13] 2025-07-28 07:47:44,430 | INFO     | all payload control threads have been joined
[2025-07-28 09:48:13] 2025-07-28 07:47:44,839 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:44,839 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:44,849 | INFO     | [job] control thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,055 | INFO     | [data] control thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,155 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:48:13] 2025-07-28 07:47:45,435 | INFO     | [payload] control thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,517 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,766 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:45,801 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:46,146 | INFO     | [job] validate thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:46,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:46,239 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:46,269 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:46,348 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:47,191 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:47,934 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:48:13] 2025-07-28 07:47:48,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320759088960)>', '<ExcThread(monitor, started 140320129935104)>']
[2025-07-28 09:48:13] 2025-07-28 07:47:53,397 | INFO     | all workflow threads have been joined
[2025-07-28 09:48:13] 2025-07-28 07:47:53,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:48:13] 2025-07-28 07:47:53,397 | INFO     | traces error code: 0
[2025-07-28 09:48:13] 2025-07-28 07:47:53,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:48:13] 2025-07-28 07:48:13,463 | INFO     | PID=3408521 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 09:48:13] 2025-07-28 07:48:13,464 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:48:13] 2025-07-28 07:48:13,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:48:13] 2025-07-28 07:48:13,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:48:13] 2025-07-28 07:48:13,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:48:13] 2025-07-28 07:48:13,464 | INFO     | [monitor] control thread has ended
[2025-07-28 09:48:13] 2025-07-28 07:48:13,511 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:48:13] 2025-07-28 07:48:13,513 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:48:13] 2025-07-28 07:48:13,516 [wrapper] pilotpid: 3408521
[2025-07-28 09:48:13] 2025-07-28 07:48:13,518 [wrapper] Pilot exit status: 0
[2025-07-28 09:48:13] 2025-07-28 07:48:13,526 [wrapper] pandaids: 6747410183
[2025-07-28 09:48:13] 2025-07-28 07:48:13,543 [wrapper] cleanup supervisor_pilot 3426939 3408522
[2025-07-28 09:48:13] 2025-07-28 07:48:13,546 [wrapper] Test setup, not cleaning
[2025-07-28 09:48:13] 2025-07-28 07:48:13,548 [wrapper] apfmon messages muted
[2025-07-28 09:48:13] 2025-07-28 07:48:13,550 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:48:13] 2025-07-28 07:48:13,553 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:48:13]  *** Error codes and diagnostics ***
[2025-07-28 09:48:13]     "exeErrorCode": 0,
[2025-07-28 09:48:13]     "exeErrorDiag": "",
[2025-07-28 09:48:13]     "pilotErrorCode": 0,
[2025-07-28 09:48:13]     "pilotErrorDiag": "",
[2025-07-28 09:48:13]  *** Listing of results directory ***
[2025-07-28 09:48:13] total 436184
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc    530466 Jul 27 13:42 pilot3.tar.gz
[2025-07-28 09:48:13] -rwx------ 1 boinc boinc     36292 Jul 27 13:49 runpilot2-wrapper.sh
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:49 queuedata.json
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc       100 Jul 28 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:48:13] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 08:12 run_atlas
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc       105 Jul 28 08:12 job.xml
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc 229037932 Jul 28 08:12 EVNT.45743347._001902.pool.root.1
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc      6933 Jul 28 08:12 init_data.xml
[2025-07-28 09:48:13] drwxrwx--x 2 boinc boinc      4096 Jul 28 08:12 shared
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc    542901 Jul 28 08:12 input.tar.gz
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:12 start_atlas.sh
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:12 boinc_lockfile
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc      2563 Jul 28 08:12 pandaJob.out
[2025-07-28 09:48:13] -rw------- 1 boinc boinc    980125 Jul 28 08:13 agis_schedconf.cvmfs.json
[2025-07-28 09:48:13] -rw------- 1 boinc boinc   1593052 Jul 28 08:13 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:48:13] drwx------ 4 boinc boinc      4096 Jul 28 08:13 pilot3
[2025-07-28 09:48:13] -rw------- 1 boinc boinc 212156734 Jul 28 09:47 HITS.45743349._047891.pool.root.1
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc       529 Jul 28 09:47 boinc_task_state.xml
[2025-07-28 09:48:13] -rw------- 1 boinc boinc        95 Jul 28 09:47 pilot_heartbeat.json
[2025-07-28 09:48:13] -rw------- 1 boinc boinc      1028 Jul 28 09:47 memory_monitor_summary.json
[2025-07-28 09:48:13] -rw------- 1 boinc boinc    239560 Jul 28 09:47 log.45743349._047891.job.log.tgz.1
[2025-07-28 09:48:13] -rw------- 1 boinc boinc      7753 Jul 28 09:47 heartbeat.json
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc        27 Jul 28 09:48 wrapper_checkpoint.txt
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc      8192 Jul 28 09:48 boinc_mmap_file
[2025-07-28 09:48:13] -rw------- 1 boinc boinc       747 Jul 28 09:48 pilotlog.txt
[2025-07-28 09:48:13] -rw------- 1 boinc boinc    547509 Jul 28 09:48 log.45743349._047891.job.log.1
[2025-07-28 09:48:13] -rw------- 1 boinc boinc       357 Jul 28 09:48 output.list
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc       620 Jul 28 09:48 runtime_log
[2025-07-28 09:48:13] -rw------- 1 boinc boinc    808960 Jul 28 09:48 result.tar.gz
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc      8754 Jul 28 09:48 runtime_log.err
[2025-07-28 09:48:13] -rw------- 1 boinc boinc       662 Jul 28 09:48 GIiLDmL3E07n9Rq4apOajLDm4fhM0noT9bVof3QYDmrU2KDmTPEyMm.diag
[2025-07-28 09:48:13] -rw-r--r-- 1 boinc boinc     21679 Jul 28 09:48 stderr.txt
[2025-07-28 09:48:13] HITS file was successfully produced:
[2025-07-28 09:48:13] -rw------- 1 boinc boinc 212156734 Jul 28 09:47 shared/HITS.pool.root.1
[2025-07-28 09:48:13]  *** Contents of shared directory: ***
[2025-07-28 09:48:13] total 432208
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc 229037932 Jul 28 08:12 ATLAS.root_0
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc    542901 Jul 28 08:12 input.tar.gz
[2025-07-28 09:48:13] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:12 start_atlas.sh
[2025-07-28 09:48:13] -rw------- 1 boinc boinc 212156734 Jul 28 09:47 HITS.pool.root.1
[2025-07-28 09:48:13] -rw------- 1 boinc boinc    808960 Jul 28 09:48 result.tar.gz
09:48:14 (3404871): run_atlas exited; CPU time 16331.180482
09:48:14 (3404871): called boinc_finish(0)

</stderr_txt>
]]>

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