Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:53 (3105619): wrapper (7.7.26015): starting
09:57:53 (3105619): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:57:53] Arguments: --nthreads 8
[2025-07-27 09:57:53] Threads: 8
[2025-07-27 09:57:53] Checking for CVMFS
[2025-07-27 09:57:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:57:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:57:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:57:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:57:53] 2.11.3.0 3400840 44185 226120 148818 0 650 26397475 45568000 6468 130560 0 281063341 99.775 184876957 17265 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 09:57:53] CVMFS is ok
[2025-07-27 09:57:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 09:57:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 09:57:53] Further information can be found at the LHC@home message board.
[2025-07-27 09:57:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:57:53] Checking for apptainer binary...
[2025-07-27 09:57:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:57:53] Running /usr/bin/apptainer --version
[2025-07-27 09:57:53] apptainer version 1.3.3-1.el9
[2025-07-27 09:57:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:57:53] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0005.triumf.lcg
[2025-07-27 09:57:53] apptainer works
[2025-07-27 09:57:53] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:57:53] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:57:53] Starting ATLAS job with PandaID=6747413304
[2025-07-27 09:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:01:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:01:12] 2025-07-27 17:00:39,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | found no stored workdir sizes
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | wrong length of table data, x=[1753635504.0], y=[829.0] (must be same and length>=4)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . Timing measurements:
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . get job = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . initial setup = 2 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload setup = 4 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-in = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload execution = 15 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-out = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . log creation = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 10:01:12] 2025-07-27 17:00:39,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747413304/pilotlog.txt
[2025-07-27 10:01:12] 2025-07-27 17:00:39,827 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 10:01:12] - Log from pilotlog.txt -
[2025-07-27 10:01:12] 2025-07-27 17:00:39,814 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:01:12] 2025-07-27 17:00:39,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:01:12] 2025-07-27 17:00:39,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | found no stored workdir sizes
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | wrong length of table data, x=[1753635504.0], y=[829.0] (must be same and length>=4)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . Timing measurements:
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . get job = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . initial setup = 2 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload setup = 4 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-in = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload execution = 15 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-out = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . log creation = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 10:01:12] 2025-07-27 17:00:39,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747413304/pilotlog.txt
[2025-07-27 10:01:12] 2025-07-27 17:00:39,827 | WARNING  | 
[2025-07-27 10:01:12] [begin log extracts]
[2025-07-27 10:01:12] - Log from pilotlog.txt -
[2025-07-27 10:01:12] 2025-07-27 17:00:39,814 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 10:01:12] 2025-07-27 17:00:39,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 10:01:12] 2025-07-27 17:00:39,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | found no stored workdir sizes
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | WARNING  | wrong length of table data, x=[1753635504.0], y=[829.0] (must be same and length>=4)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . Timing measurements:
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . get job = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . initial setup = 2 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload setup = 4 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-in = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . payload execution = 15 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . stage-out = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | . log creation = 0 s
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | ..............................
[2025-07-27 10:01:12] 2025-07-27 17:00:39,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 10:01:12] 2025-07-27 17:00:39,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6747413304/pilotlog.txt
[2025-07-27 10:01:12] [end log extracts]
[2025-07-27 10:01:12] 2025-07-27 17:00:39,827 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 10:01:12] 2025-07-27 17:00:39,828 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 10:01:12] 2025-07-27 17:00:40,093 | INFO     | 
[2025-07-27 10:01:12] 2025-07-27 17:00:40,093 | INFO     | job summary report
[2025-07-27 10:01:12] 2025-07-27 17:00:40,093 | INFO     | --------------------------------------------------
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | PanDA job id: 6747413304
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | task id: 45743349
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 09:58:31,749 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | pilot state: failed 
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | transexitcode: 65
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | exeerrorcode: 65
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | exitcode: 65
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | cpuconsumptiontime: 16 s
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | nevents: 0
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | neventsw: 0
[2025-07-27 10:01:12] 2025-07-27 17:00:40,094 | INFO     | pid: 3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | pgrp: 3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | corecount: 8
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | event service: False
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | sizes: {0: 2397250, 1: 2397449, 4: 2397711, 11: 2397739, 23: 2425226, 24: 2425226, 144: 2425520}
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | --------------------------------------------------
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | 
[2025-07-27 10:01:12] 2025-07-27 17:00:40,095 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:01:12] 2025-07-27 17:00:40,110 | INFO     | job 6747413304 has completed (purged errors)
[2025-07-27 10:01:12] 2025-07-27 17:00:40,110 | INFO     | overall cleanup function is called
[2025-07-27 10:01:12] 2025-07-27 17:00:41,116 | INFO     | --- collectZombieJob: --- 10, [3115492]
[2025-07-27 10:01:12] 2025-07-27 17:00:41,116 | INFO     | zombie collector waiting for pid 3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:41,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:01:12] 2025-07-27 17:00:41,116 | INFO     | collected zombie processes
[2025-07-27 10:01:12] 2025-07-27 17:00:41,116 | INFO     | will attempt to kill all subprocesses of pid=3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:41,273 | INFO     | process IDs to be killed: [3115492] (in reverse order)
[2025-07-27 10:01:12] 2025-07-27 17:00:41,317 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:01:12] 2025-07-27 17:00:41,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:01:12] 2025-07-27 17:00:41,323 | INFO     | did not find any defunct processes belonging to 3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:41,327 | INFO     | did not find any defunct processes belonging to 3115492
[2025-07-27 10:01:12] 2025-07-27 17:00:41,327 | INFO     | ready for new job
[2025-07-27 10:01:12] 2025-07-27 17:00:41,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:01:12] 2025-07-27 17:00:41,329 | INFO     | ***************************************
[2025-07-27 10:01:12] 2025-07-27 17:00:41,329 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:01:12] 2025-07-27 17:00:41,329 | INFO     | ***************************************
[2025-07-27 10:01:12] 2025-07-27 17:00:41,329 | INFO     | 
[2025-07-27 10:01:12] 2025-07-27 17:00:41,341 | INFO     | architecture information:
[2025-07-27 10:01:12] 2025-07-27 17:00:41,342 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:01:12] 2025-07-27 17:00:41,351 | INFO     | cat /etc/os-release:
[2025-07-27 10:01:12] NAME="CentOS Linux"
[2025-07-27 10:01:12] VERSION="7 (Core)"
[2025-07-27 10:01:12] ID="centos"
[2025-07-27 10:01:12] ID_LIKE="rhel fedora"
[2025-07-27 10:01:12] VERSION_ID="7"
[2025-07-27 10:01:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:01:12] ANSI_COLOR="0;31"
[2025-07-27 10:01:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:01:12] HOME_URL="https://www.centos.org/"
[2025-07-27 10:01:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:01:12] 
[2025-07-27 10:01:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:01:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:01:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:01:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:01:12] 
[2025-07-27 10:01:12] 2025-07-27 17:00:41,351 | INFO     | ***************************************
[2025-07-27 10:01:12] 2025-07-27 17:00:41,854 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 10:01:12] 2025-07-27 17:00:41,867 | INFO     | sufficient remaining disk space (1426384224256 B)
[2025-07-27 10:01:12] 2025-07-27 17:00:41,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:01:12] 2025-07-27 17:00:41,867 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:01:12] 2025-07-27 17:00:41,867 | INFO     | update_server=False
[2025-07-27 10:01:12] 2025-07-27 17:00:41,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:01:12] 2025-07-27 17:00:41,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:01:12] 2025-07-27 17:00:41,980 | INFO     | all data control threads have been joined
[2025-07-27 10:01:12] 2025-07-27 17:00:42,378 | INFO     | all job control threads have been joined
[2025-07-27 10:01:12] 2025-07-27 17:00:42,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:01:12] 2025-07-27 17:00:42,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:01:12] 2025-07-27 17:00:42,854 | INFO     | aborting loop
[2025-07-27 10:01:12] 2025-07-27 17:00:42,872 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:42,873 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:42,936 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:42,987 | INFO     | [data] control thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,024 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,039 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,042 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,077 | INFO     | all payload control threads have been joined
[2025-07-27 10:01:12] 2025-07-27 17:00:43,085 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,384 | INFO     | [job] control thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:01:12] 2025-07-27 17:00:43,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,603 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:43,858 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:44,081 | INFO     | [payload] control thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:44,191 | INFO     | [job] validate thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:44,524 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:47,398 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:01:12] 2025-07-27 17:00:48,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105230800704)>', '<ExcThread(monitor, started 140104668518144)>']
[2025-07-27 10:01:12] 2025-07-27 17:00:53,824 | INFO     | all workflow threads have been joined
[2025-07-27 10:01:12] 2025-07-27 17:00:53,824 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:01:12] 2025-07-27 17:00:53,825 | INFO     | traces error code: 0
[2025-07-27 10:01:12] 2025-07-27 17:00:53,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:01:12] 2025-07-27 17:01:12,770 | INFO     | PID=3109191 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 10:01:12] 2025-07-27 17:01:12,770 | INFO     | .. there are 12 such processes running
[2025-07-27 10:01:12] 2025-07-27 17:01:12,771 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:01:12] 2025-07-27 17:01:12,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:01:12] 2025-07-27 17:01:12,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:01:12] 2025-07-27 17:01:12,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:01:12] 2025-07-27 17:01:12,771 | INFO     | [monitor] control thread has ended
[2025-07-27 10:01:12] 2025-07-27 17:01:12,875 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:01:12] 2025-07-27 17:01:12,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:01:12] 2025-07-27 17:01:12,878 [wrapper] pilotpid: 3109191
[2025-07-27 10:01:12] 2025-07-27 17:01:12,880 [wrapper] Pilot exit status: 0
[2025-07-27 10:01:12] 2025-07-27 17:01:12,887 [wrapper] pandaids: 6747413304
[2025-07-27 10:01:12] 2025-07-27 17:01:12,916 [wrapper] cleanup supervisor_pilot 3109197 3109192
[2025-07-27 10:01:12] 2025-07-27 17:01:12,919 [wrapper] Test setup, not cleaning
[2025-07-27 10:01:12] 2025-07-27 17:01:12,920 [wrapper] apfmon messages muted
[2025-07-27 10:01:12] 2025-07-27 17:01:12,922 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:01:12] 2025-07-27 17:01:12,924 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:01:12]  *** Error codes and diagnostics ***
[2025-07-27 10:01:12]     "exeErrorCode": 65,
[2025-07-27 10:01:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 10:01:12]     "pilotErrorCode": 1305,
[2025-07-27 10:01:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 10:01:12]  *** Listing of results directory ***
[2025-07-27 10:01:12] total 148560
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc    530466 Jul 27 07:11 pilot3.tar.gz
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc      5112 Jul 27 07:29 queuedata.json
[2025-07-27 10:01:12] -rwx------. 1 boinc boinc     36292 Jul 27 07:31 runpilot2-wrapper.sh
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc       100 Jul 27 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:01:12] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 09:57 run_atlas
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc       105 Jul 27 09:57 job.xml
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc 148056590 Jul 27 09:57 EVNT.45743347._002785.pool.root.1
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc      6446 Jul 27 09:57 init_data.xml
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc     15095 Jul 27 09:57 start_atlas.sh
[2025-07-27 10:01:12] drwxrwx--x. 2 boinc boinc      4096 Jul 27 09:57 shared
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc    542893 Jul 27 09:57 input.tar.gz
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc         0 Jul 27 09:57 boinc_lockfile
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc      2562 Jul 27 09:57 pandaJob.out
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc    980125 Jul 27 09:57 agis_schedconf.cvmfs.json
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc   1593052 Jul 27 09:58 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:01:12] drwx------. 4 boinc boinc      4096 Jul 27 09:58 pilot3
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc       952 Jul 27 09:58 memory_monitor_summary.json
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc     20780 Jul 27 09:58 log.45743349._050078.job.log.tgz.1
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc       522 Jul 27 09:58 boinc_task_state.xml
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc      8376 Jul 27 10:00 heartbeat.json
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc      8192 Jul 27 10:01 boinc_mmap_file
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc        22 Jul 27 10:01 wrapper_checkpoint.txt
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc        95 Jul 27 10:01 pilot_heartbeat.json
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc       823 Jul 27 10:01 pilotlog.txt
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc     74266 Jul 27 10:01 log.45743349._050078.job.log.1
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc       188 Jul 27 10:01 output.list
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc       620 Jul 27 10:01 runtime_log
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc    112640 Jul 27 10:01 result.tar.gz
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc      8648 Jul 27 10:01 runtime_log.err
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc       645 Jul 27 10:01 a8DLDmnaH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyYVLDmJZKEUn.diag
[2025-07-27 10:01:12] -rw-r--r--. 1 boinc boinc     21798 Jul 27 10:01 stderr.txt
[2025-07-27 10:01:12] No HITS result produced
[2025-07-27 10:01:12]  *** Contents of shared directory: ***
[2025-07-27 10:01:12] total 145252
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc 148056590 Jul 27 09:57 ATLAS.root_0
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc     15095 Jul 27 09:57 start_atlas.sh
[2025-07-27 10:01:12] -rw-r--r--. 2 boinc boinc    542893 Jul 27 09:57 input.tar.gz
[2025-07-27 10:01:12] -rw-------. 1 boinc boinc    112640 Jul 27 10:01 result.tar.gz
10:01:14 (3105619): run_atlas exited; CPU time 20.506368
10:01:14 (3105619): called boinc_finish(0)

</stderr_txt>
]]>

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