Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:54:14 (948): wrapper (7.7.26015): starting
06:54:14 (948): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 06:54:14] Arguments: --nthreads 8
[2025-07-28 06:54:14] Threads: 8
[2025-07-28 06:54:14] Checking for CVMFS
[2025-07-28 06:54:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:54:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:54:17] 2.11.2.0 32728 110502 110204 148836 2 156 24891996 25165825 4355 130560 0 82140688 99.890 46004829 3380 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 06:54:17] CVMFS is ok
[2025-07-28 06:54:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:54:17] Checking for apptainer binary...
[2025-07-28 06:54:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 06:54:17] Running /usr/bin/apptainer --version
[2025-07-28 06:54:17] apptainer version 1.3.2-1.el7
[2025-07-28 06:54:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:54:18] cg-vwn337.simple-grid.lan
[2025-07-28 06:54:18] apptainer works
[2025-07-28 06:54:18] Set ATHENA_PROC_NUMBER=8
[2025-07-28 06:54:18] Set ATHENA_CORE_NUMBER=8
[2025-07-28 06:54:18] Starting ATLAS job with PandaID=6747376358
[2025-07-28 06:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:12:32]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:12:32] 2025-07-28 09:36:29,706 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:12:32] 2025-07-28 09:36:29,707 | INFO     | sum of square deviations: 6448679050.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,709 | INFO     | sum of deviations: 19375408284.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,710 | INFO     | mean x: 1753686893.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,710 | INFO     | mean y: 2485608.8181818184
[2025-07-28 17:12:32] 2025-07-28 09:36:29,710 | INFO     | -- intersect: -5266562407.174244
[2025-07-28 17:12:32] 2025-07-28 09:36:29,710 | INFO     | intersect: -5266562407.174244
[2025-07-28 17:12:32] 2025-07-28 09:36:29,710 | INFO     | chi2: 2.4999698432297452
[2025-07-28 17:12:32] 2025-07-28 09:36:29,711 | INFO     | sum of square deviations: 6103286527.5
[2025-07-28 17:12:32] 2025-07-28 09:36:29,713 | INFO     | sum of deviations: 37061175158.49999
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | mean x: 1753686740.5
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | mean y: 2493298.7296296298
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | -- intersect: -10646472823.041462
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | intersect: -10646472823.041462
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | chi2: 1.7305140545420818
[2025-07-28 17:12:32] 2025-07-28 09:36:29,714 | INFO     | current chi2=1.7305140545420818 (change=30.77860282080815 %)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,715 | INFO     | sum of square deviations: 5770452380.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,717 | INFO     | sum of deviations: 36186766114.00001
[2025-07-28 17:12:32] 2025-07-28 09:36:29,717 | INFO     | mean x: 1753686588.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | mean y: 2492898.045283019
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | -- intersect: -10994954480.112389
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | intersect: -10994954480.112389
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | chi2: 1.731285714220623
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | current chi2=1.731285714220623 (change=-0.044591355760204746 %)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,718 | INFO     | right removable region: 264
[2025-07-28 17:12:32] 2025-07-28 09:36:29,719 | INFO     | sum of square deviations: 6103286527.5
[2025-07-28 17:12:32] 2025-07-28 09:36:29,722 | INFO     | sum of deviations: -29237238573.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,723 | INFO     | mean x: 1753687045.5
[2025-07-28 17:12:32] 2025-07-28 09:36:29,723 | INFO     | mean y: 2506931.8592592594
[2025-07-28 17:12:32] 2025-07-28 09:36:29,723 | INFO     | -- intersect: 8403385098.178153
[2025-07-28 17:12:32] 2025-07-28 09:36:29,723 | INFO     | intersect: 8403385098.178153
[2025-07-28 17:12:32] 2025-07-28 09:36:29,723 | INFO     | chi2: 0.893081496556654
[2025-07-28 17:12:32] 2025-07-28 09:36:29,724 | INFO     | current chi2=0.893081496556654 (change=64.27630921327956 %)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,724 | INFO     | sum of square deviations: 5770452380.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,726 | INFO     | sum of deviations: -28386354208.999996
[2025-07-28 17:12:32] 2025-07-28 09:36:29,726 | INFO     | mean x: 1753687198.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | mean y: 2506518.524528302
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | -- intersect: 8629349389.068537
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | intersect: 8629349389.068537
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | chi2: 0.8791152885487479
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | current chi2=0.8791152885487479 (change=1.5638223456374327 %)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,727 | INFO     | left removable region: 20
[2025-07-28 17:12:32] 2025-07-28 09:36:29,728 | INFO     | sum of square deviations: 4504437945.0
[2025-07-28 17:12:32] 2025-07-28 09:36:29,733 | INFO     | sum of deviations: 6741096244.500002
[2025-07-28 17:12:32] 2025-07-28 09:36:29,733 | INFO     | mean x: 1753687167.5
[2025-07-28 17:12:32] 2025-07-28 09:36:29,733 | INFO     | mean y: 2505798.6598360655
[2025-07-28 17:12:32] 2025-07-28 09:36:29,733 | INFO     | -- intersect: -2621966804.405871
[2025-07-28 17:12:32] 2025-07-28 09:36:29,734 | INFO     | intersect: -2621966804.405871
[2025-07-28 17:12:32] 2025-07-28 09:36:29,734 | INFO     | chi2: 0.012683775022700178
[2025-07-28 17:12:32] 2025-07-28 09:36:29,734 | INFO     | -- intersect: -2621966804.405871
[2025-07-28 17:12:32] 2025-07-28 09:36:29,734 | INFO     | current memory leak: 1.50 B/s (using 244 data points, chi2=0.01)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,735 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 17:12:32] 2025-07-28 09:36:29,735 | INFO     | ..............................
[2025-07-28 17:12:32] 2025-07-28 09:36:29,735 | INFO     | . Timing measurements:
[2025-07-28 17:12:32] 2025-07-28 09:36:29,735 | INFO     | . get job = 0 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . initial setup = 2 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . payload setup = 13 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . stage-in = 0 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . payload execution = 16773 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . stage-out = 3 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | . log creation = 1 s
[2025-07-28 17:12:32] 2025-07-28 09:36:29,736 | INFO     | ..............................
[2025-07-28 17:12:32] 2025-07-28 09:36:30,200 | INFO     | 
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | job summary report
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | --------------------------------------------------
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | PanDA job id: 6747376358
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | task id: 45743349
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | errors: (none)
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:12:32] 2025-07-28 09:36:30,201 | INFO     | pilot state: finished 
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | transexitcode: 0
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | exeerrorcode: 0
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | exeerrordiag: 
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | exitcode: 0
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | exitmsg: OK
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | cpuconsumptiontime: 63053 s
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | nevents: 400
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | neventsw: 0
[2025-07-28 17:12:32] 2025-07-28 09:36:30,202 | INFO     | pid: 11552
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | pgrp: 11552
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | corecount: 8
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | event service: False
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | sizes: {0: 2397475, 1: 2397503, 10: 2397765, 12: 2397793, 16791: 2428998, 16796: 2437996, 16799: 2438180, 16889: 2438374}
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | --------------------------------------------------
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | 
[2025-07-28 17:12:32] 2025-07-28 09:36:30,203 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-28 17:12:32] 2025-07-28 09:36:30,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:12:32] 2025-07-28 09:36:30,591 | INFO     | job 6747376358 has completed (purged errors)
[2025-07-28 17:12:32] 2025-07-28 09:36:30,591 | INFO     | overall cleanup function is called
[2025-07-28 17:12:32] 2025-07-28 09:36:31,600 | INFO     | --- collectZombieJob: --- 10, [11552]
[2025-07-28 17:12:32] 2025-07-28 09:36:31,600 | INFO     | zombie collector waiting for pid 11552
[2025-07-28 17:12:32] 2025-07-28 09:36:31,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:12:32] 2025-07-28 09:36:31,600 | INFO     | collected zombie processes
[2025-07-28 17:12:32] 2025-07-28 09:36:31,600 | INFO     | will attempt to kill all subprocesses of pid=11552
[2025-07-28 17:12:32] 2025-07-28 09:36:31,728 | INFO     | process IDs to be killed: [11552] (in reverse order)
[2025-07-28 17:12:32] 2025-07-28 09:36:31,920 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:12:32] 2025-07-28 09:36:31,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:12:32] 2025-07-28 09:36:31,928 | INFO     | did not find any defunct processes belonging to 11552
[2025-07-28 17:12:32] 2025-07-28 09:36:31,931 | INFO     | did not find any defunct processes belonging to 11552
[2025-07-28 17:12:32] 2025-07-28 09:36:31,931 | INFO     | ready for new job
[2025-07-28 17:12:32] 2025-07-28 09:36:31,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:12:32] 2025-07-28 09:36:31,933 | INFO     | ***************************************
[2025-07-28 17:12:32] 2025-07-28 09:36:31,933 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:12:32] 2025-07-28 09:36:31,934 | INFO     | ***************************************
[2025-07-28 17:12:32] 2025-07-28 09:36:31,934 | INFO     | 
[2025-07-28 17:12:32] 2025-07-28 09:36:31,934 | INFO     | pilot is running in a VM
[2025-07-28 17:12:32] 2025-07-28 09:36:31,934 | INFO     | architecture information:
[2025-07-28 17:12:32] 2025-07-28 09:36:31,935 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:12:32] 2025-07-28 09:36:32,092 | INFO     | cat /etc/os-release:
[2025-07-28 17:12:32] NAME="CentOS Linux"
[2025-07-28 17:12:32] VERSION="7 (Core)"
[2025-07-28 17:12:32] ID="centos"
[2025-07-28 17:12:32] ID_LIKE="rhel fedora"
[2025-07-28 17:12:32] VERSION_ID="7"
[2025-07-28 17:12:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:12:32] ANSI_COLOR="0;31"
[2025-07-28 17:12:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:12:32] HOME_URL="https://www.centos.org/"
[2025-07-28 17:12:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:12:32] 
[2025-07-28 17:12:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:12:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:12:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:12:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:12:32] 
[2025-07-28 17:12:32] 2025-07-28 09:36:32,092 | INFO     | ***************************************
[2025-07-28 17:12:32] 2025-07-28 09:36:32,595 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-28 17:12:32] 2025-07-28 09:36:32,756 | INFO     | sufficient remaining disk space (496985178112 B)
[2025-07-28 17:12:32] 2025-07-28 09:36:32,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:12:32] 2025-07-28 09:36:32,756 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:12:32] 2025-07-28 09:36:32,756 | INFO     | update_server=False
[2025-07-28 17:12:32] 2025-07-28 09:36:32,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:12:32] 2025-07-28 09:36:32,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:12:32] 2025-07-28 09:36:32,883 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 17:12:32] 2025-07-28 09:36:32,884 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 17:12:32] 2025-07-28 09:36:32,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:12:32] 2025-07-28 09:36:32,884 | INFO     | will abort loop
[2025-07-28 17:12:32] 2025-07-28 09:36:33,018 | INFO     | all data control threads have been joined
[2025-07-28 17:12:32] 2025-07-28 09:36:33,282 | INFO     | all job control threads have been joined
[2025-07-28 17:12:32] 2025-07-28 09:36:33,763 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:33,800 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:33,891 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:33,911 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,025 | INFO     | [data] control thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,056 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,258 | INFO     | all payload control threads have been joined
[2025-07-28 17:12:32] 2025-07-28 09:36:34,289 | INFO     | [job] control thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,491 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,510 | INFO     | [job] validate thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,558 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,634 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,765 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:34,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:12:32] 2025-07-28 09:36:35,264 | INFO     | [payload] control thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:35,901 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:36,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:12:32] 2025-07-28 09:36:40,245 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:43,758 | INFO     | job.realtimelogging is not enabled
[2025-07-28 17:12:32] 2025-07-28 09:36:44,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:12:32] 2025-07-28 09:36:46,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494971148096)>', '<ExcThread(monitor, started 140494084503296)>']
[2025-07-28 17:12:32] 2025-07-28 09:36:51,793 | INFO     | all workflow threads have been joined
[2025-07-28 17:12:32] 2025-07-28 09:36:51,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:12:32] 2025-07-28 09:36:51,794 | INFO     | traces error code: 0
[2025-07-28 17:12:32] 2025-07-28 09:36:51,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:12:32] 2025-07-28 09:37:02,310 | INFO     | PID=4984 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 17:12:32] 2025-07-28 09:37:02,311 | INFO     | .. there are 9 such processes running
[2025-07-28 17:12:32] 2025-07-28 09:37:02,311 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:12:32] 2025-07-28 09:37:02,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:12:32] 2025-07-28 09:37:02,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:12:32] 2025-07-28 09:37:02,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:12:32] 2025-07-28 09:37:02,312 | INFO     | [monitor] control thread has ended
[2025-07-28 17:12:32] 2025-07-28 09:37:02,550 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:12:32] 2025-07-28 09:37:02,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:12:32] 2025-07-28 09:37:02,564 [wrapper] pilotpid: 4984
[2025-07-28 17:12:32] 2025-07-28 09:37:02,569 [wrapper] Pilot exit status: 0
[2025-07-28 17:12:32] 2025-07-28 09:37:02,984 [wrapper] pandaids: 6747376358
[2025-07-28 17:12:32] 2025-07-28 09:37:03,576 [wrapper] cleanup supervisor_pilot  4713 4985
[2025-07-28 17:12:32] 2025-07-28 09:37:03,626 [wrapper] Test setup, not cleaning
[2025-07-28 17:12:32] 2025-07-28 09:37:03,745 [wrapper] apfmon messages muted
[2025-07-28 17:12:32] 2025-07-28 09:37:03,860 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:12:32] 2025-07-28 09:37:03,906 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:12:32]  *** Error codes and diagnostics ***
[2025-07-28 17:12:32]     "exeErrorCode": 0,
[2025-07-28 17:12:32]     "exeErrorDiag": "",
[2025-07-28 17:12:32]     "pilotErrorCode": 0,
[2025-07-28 17:12:32]     "pilotErrorDiag": "",
[2025-07-28 17:12:32]  *** Listing of results directory ***
[2025-07-28 17:12:32] total 442348
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc    530466 Jul 27 13:10 pilot3.tar.gz
[2025-07-28 17:12:32] -rwx------. 1 boinc boinc     36292 Jul 27 13:33 runpilot2-wrapper.sh
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc      5112 Jul 27 13:33 queuedata.json
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc       100 Jul 28 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:12:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 06:54 run_atlas
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc       105 Jul 28 06:54 job.xml
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc      6390 Jul 28 06:54 init_data.xml
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc 234071820 Jul 28 06:54 EVNT.45743347._002642.pool.root.1
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc     15095 Jul 28 06:54 start_atlas.sh
[2025-07-28 17:12:32] drwxrwx--x. 2 boinc boinc        68 Jul 28 06:54 shared
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc    542896 Jul 28 06:54 input.tar.gz
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc         0 Jul 28 06:54 boinc_lockfile
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc      2563 Jul 28 06:54 pandaJob.out
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc    980125 Jul 28 06:54 agis_schedconf.cvmfs.json
[2025-07-28 17:12:32] drwx------. 4 boinc boinc      4096 Jul 28 06:54 pilot3
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc 211283640 Jul 28 11:33 HITS.45743349._047593.pool.root.1
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc       531 Jul 28 11:33 boinc_task_state.xml
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc      1018 Jul 28 11:34 memory_monitor_summary.json
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc   1593052 Jul 28 11:34 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc    421680 Jul 28 11:34 log.45743349._047593.job.log.tgz.1
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc      7779 Jul 28 11:36 heartbeat.json
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc        95 Jul 28 11:37 pilot_heartbeat.json
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc       819 Jul 28 11:37 pilotlog.txt
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc   1450065 Jul 28 11:37 log.45743349._047593.job.log.1
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc       357 Jul 28 11:37 output.list
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc       620 Jul 28 11:37 runtime_log
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc   1894400 Jul 28 11:37 result.tar.gz
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc       656 Jul 28 11:37 ZKqKDmLoE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW7ULDmPpGR1m.diag
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc      8660 Jul 28 11:37 runtime_log.err
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc      8192 Jul 28 17:12 boinc_mmap_file
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc        28 Jul 28 17:12 wrapper_checkpoint.txt
[2025-07-28 17:12:32] -rw-r--r--. 1 boinc boinc     20535 Jul 28 17:12 stderr.txt
[2025-07-28 17:12:32] HITS file was successfully produced:
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc 211283640 Jul 28 11:33 shared/HITS.pool.root.1
[2025-07-28 17:12:32]  *** Contents of shared directory: ***
[2025-07-28 17:12:32] total 437320
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc 234071820 Jul 28 06:54 ATLAS.root_0
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc     15095 Jul 28 06:54 start_atlas.sh
[2025-07-28 17:12:32] -rw-r--r--. 2 boinc boinc    542896 Jul 28 06:54 input.tar.gz
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc 211283640 Jul 28 11:33 HITS.pool.root.1
[2025-07-28 17:12:32] -rw-------. 1 boinc boinc   1894400 Jul 28 11:37 result.tar.gz
17:12:34 (948): run_atlas exited; CPU time 63256.579769
17:12:34 (948): called boinc_finish(0)

</stderr_txt>
]]>

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