Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:55:25 (3340863): wrapper (7.7.26015): starting
12:55:25 (3340863): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 12:55:25] Arguments: --nthreads 10
[2025-07-27 12:55:25] Threads: 10
[2025-07-27 12:55:25] Checking for CVMFS
[2025-07-27 12:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:55:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:55:26] 2.13.1.0 129229 5377 149500 148818 3 324 28466659 39288832 5152 16776704 0 5790391 99.911 6335813 42063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:55:26] CVMFS is ok
[2025-07-27 12:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:55:26] Further information can be found at the LHC@home message board.
[2025-07-27 12:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:55:26] Checking for apptainer binary...
[2025-07-27 12:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:55:26] Running /usr/bin/apptainer --version
[2025-07-27 12:55:26] apptainer version 1.4.1-1.el9
[2025-07-27 12:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:55:26] c-210-21.aglt2.org
[2025-07-27 12:55:26] apptainer works
[2025-07-27 12:55:26] Set ATHENA_PROC_NUMBER=10
[2025-07-27 12:55:26] Set ATHENA_CORE_NUMBER=10
[2025-07-27 12:55:26] Starting ATLAS job with PandaID=6747376575
[2025-07-27 12:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:36:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:36:12]  mtime=0
[2025-07-27 14:36:12]  protocol_id=None
[2025-07-27 14:36:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 14:36:12]  replicas=None
[2025-07-27 14:36:12]  scope=mc23_13p6TeV
[2025-07-27 14:36:12]  status=None
[2025-07-27 14:36:12]  status_code=0
[2025-07-27 14:36:12]  storage_token=
[2025-07-27 14:36:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747376575/log.45743349._047784.job.log.tgz.1
[2025-07-27 14:36:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/89/log.45743349._047784.job.log.tgz.1
[2025-07-27 14:36:12]  workdir=None
[2025-07-27 14:36:12] ]
[2025-07-27 14:36:12] 2025-07-27 18:35:33,155 | INFO     | transferring file log.45743349._047784.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747376575/log.45743349._047784.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 14:36:12] 2025-07-27 18:35:33,156 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747376575/log.45743349._047784.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._047784.job
[2025-07-27 14:36:12] 2025-07-27 18:35:33,180 | INFO     | adding to output.list: log.45743349._047784.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/89/log.45743349._047784.job.log.tg
[2025-07-27 14:36:12] 2025-07-27 18:35:33,182 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 14:36:12] 2025-07-27 18:35:33,182 | INFO     | summary of transferred files:
[2025-07-27 14:36:12] 2025-07-27 18:35:33,182 | INFO     |  -- lfn=log.45743349._047784.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 14:36:12] 2025-07-27 18:35:33,182 | INFO     | stage-out finished correctly
[2025-07-27 14:36:12] 2025-07-27 18:35:34,174 | INFO     | monitor loop #445: job 0:6747376575 is in state 'finished'
[2025-07-27 14:36:12] 2025-07-27 18:35:34,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:36:12] 2025-07-27 18:35:35,047 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 14:36:12] 2025-07-27 18:35:35,125 | INFO     | job 6747376575 has state=finished
[2025-07-27 14:36:12] 2025-07-27 18:35:35,126 | INFO     | preparing for final server update for job 6747376575 in state='finished'
[2025-07-27 14:36:12] 2025-07-27 18:35:35,126 | INFO     | this job has now completed (state=finished)
[2025-07-27 14:36:12] 2025-07-27 18:35:35,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 14:36:12] 2025-07-27 18:35:35,126 | INFO     | log transfer has been attempted: DONE
[2025-07-27 14:36:12] 2025-07-27 18:35:35,127 | INFO     | job 6747376575 has finished - writing final server update
[2025-07-27 14:36:12] 2025-07-27 18:35:35,127 | INFO     | total number of processed events: 400 (read)
[2025-07-27 14:36:12] 2025-07-27 18:35:35,127 | INFO     | executing command: lscpu
[2025-07-27 14:36:12] 2025-07-27 18:35:35,166 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 14:36:12] 2025-07-27 18:35:36,679 | INFO     | monitor loop #446: job 0:6747376575 is in state 'finished'
[2025-07-27 14:36:12] 2025-07-27 18:35:36,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:36:12] 2025-07-27 18:35:39,182 | INFO     | monitor loop #447: job 0:6747376575 is in state 'finished'
[2025-07-27 14:36:12] 2025-07-27 18:35:39,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,201 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 14:36:12] 2025-07-27 18:35:40,209 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2573.0611250000006
[2025-07-27 14:36:12] 2025-07-27 18:35:40,217 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376575/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,218 | INFO     | extracted standard info from prmon json
[2025-07-27 14:36:12] 2025-07-27 18:35:40,219 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 14:36:12] 2025-07-27 18:35:40,219 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 14:36:12] 2025-07-27 18:35:40,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:36:12] 2025-07-27 18:35:40,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:36:12] 2025-07-27 18:35:40,222 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:36:12] 2025-07-27 18:35:40,223 | INFO     | sum of square deviations: 233641590.0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,223 | INFO     | sum of deviations: -10610627127.0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,224 | INFO     | mean x: 1753638419.0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,224 | INFO     | mean y: 2722516.758241758
[2025-07-27 14:36:12] 2025-07-27 18:35:40,224 | INFO     | -- intersect: 79642667526.50926
[2025-07-27 14:36:12] 2025-07-27 18:35:40,224 | INFO     | intersect: 79642667526.50926
[2025-07-27 14:36:12] 2025-07-27 18:35:40,225 | INFO     | chi2: 0.14803290154532112
[2025-07-27 14:36:12] 2025-07-27 18:35:40,225 | INFO     | -- intersect: 79642667526.50926
[2025-07-27 14:36:12] 2025-07-27 18:35:40,225 | INFO     | current memory leak: -45.41 B/s (using 91 data points, chi2=0.15)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | could have reported an average CPU frequency of 2577 MHz (7 samples)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | ..............................
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | . Timing measurements:
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | . get job = 0 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | . initial setup = 2 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,226 | INFO     | . payload setup = 8 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,227 | INFO     | . stage-in = 0 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,227 | INFO     | . payload execution = 5963 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,227 | INFO     | . stage-out = 1 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,227 | INFO     | . log creation = 0 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,227 | INFO     | ..............................
[2025-07-27 14:36:12] 2025-07-27 18:35:40,356 | INFO     | 
[2025-07-27 14:36:12] 2025-07-27 18:35:40,356 | INFO     | job summary report
[2025-07-27 14:36:12] 2025-07-27 18:35:40,356 | INFO     | --------------------------------------------------
[2025-07-27 14:36:12] 2025-07-27 18:35:40,356 | INFO     | PanDA job id: 6747376575
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | task id: 45743349
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | errors: (none)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | pilot state: finished 
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | transexitcode: 0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | exeerrorcode: 0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | exeerrordiag: 
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | exitcode: 0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | exitmsg: OK
[2025-07-27 14:36:12] 2025-07-27 18:35:40,357 | INFO     | cpuconsumptiontime: 54242 s
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | nevents: 400
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | neventsw: 0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | pid: 3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | pgrp: 3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | corecount: 10
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | event service: False
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | sizes: {0: 2397361, 1: 2397503, 6: 2397765, 11: 2397793, 5975: 2424460, 5978: 2433458, 5980: 2433642, 5985: 2433836}
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | --------------------------------------------------
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | 
[2025-07-27 14:36:12] 2025-07-27 18:35:40,358 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | job 6747376575 has completed (purged errors)
[2025-07-27 14:36:12] 2025-07-27 18:35:40,385 | INFO     | overall cleanup function is called
[2025-07-27 14:36:12] 2025-07-27 18:35:41,394 | INFO     | --- collectZombieJob: --- 10, [3352384]
[2025-07-27 14:36:12] 2025-07-27 18:35:41,394 | INFO     | zombie collector waiting for pid 3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:41,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:36:12] 2025-07-27 18:35:41,394 | INFO     | collected zombie processes
[2025-07-27 14:36:12] 2025-07-27 18:35:41,395 | INFO     | will attempt to kill all subprocesses of pid=3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:41,609 | INFO     | process IDs to be killed: [3352384] (in reverse order)
[2025-07-27 14:36:12] 2025-07-27 18:35:41,671 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:36:12] 2025-07-27 18:35:41,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:36:12] 2025-07-27 18:35:41,678 | INFO     | did not find any defunct processes belonging to 3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:41,685 | INFO     | did not find any defunct processes belonging to 3352384
[2025-07-27 14:36:12] 2025-07-27 18:35:41,686 | INFO     | ready for new job
[2025-07-27 14:36:12] 2025-07-27 18:35:41,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:36:12] 2025-07-27 18:35:41,687 | INFO     | ***************************************
[2025-07-27 14:36:12] 2025-07-27 18:35:41,687 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:36:12] 2025-07-27 18:35:41,687 | INFO     | ***************************************
[2025-07-27 14:36:12] 2025-07-27 18:35:41,688 | INFO     | 
[2025-07-27 14:36:12] 2025-07-27 18:35:41,690 | INFO     | architecture information:
[2025-07-27 14:36:12] 2025-07-27 18:35:41,690 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:36:12] 2025-07-27 18:35:41,707 | INFO     | cat /etc/os-release:
[2025-07-27 14:36:12] NAME="CentOS Linux"
[2025-07-27 14:36:12] VERSION="7 (Core)"
[2025-07-27 14:36:12] ID="centos"
[2025-07-27 14:36:12] ID_LIKE="rhel fedora"
[2025-07-27 14:36:12] VERSION_ID="7"
[2025-07-27 14:36:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:36:12] ANSI_COLOR="0;31"
[2025-07-27 14:36:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:36:12] HOME_URL="https://www.centos.org/"
[2025-07-27 14:36:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:36:12] 
[2025-07-27 14:36:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:36:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:36:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:36:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:36:12] 
[2025-07-27 14:36:12] 2025-07-27 18:35:41,708 | INFO     | ***************************************
[2025-07-27 14:36:12] 2025-07-27 18:35:42,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 14:36:12] 2025-07-27 18:35:42,228 | INFO     | sufficient remaining disk space (53997469696 B)
[2025-07-27 14:36:12] 2025-07-27 18:35:42,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:36:12] 2025-07-27 18:35:42,229 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:36:12] 2025-07-27 18:35:42,229 | INFO     | update_server=False
[2025-07-27 14:36:12] 2025-07-27 18:35:42,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:36:12] 2025-07-27 18:35:42,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:36:12] 2025-07-27 18:35:42,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:36:12] 2025-07-27 18:35:42,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:36:12] 2025-07-27 18:35:42,691 | INFO     | aborting loop
[2025-07-27 14:36:12] 2025-07-27 18:35:42,834 | INFO     | all job control threads have been joined
[2025-07-27 14:36:12] 2025-07-27 18:35:43,089 | INFO     | all data control threads have been joined
[2025-07-27 14:36:12] 2025-07-27 18:35:43,125 | INFO     | all payload control threads have been joined
[2025-07-27 14:36:12] 2025-07-27 18:35:43,234 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:43,235 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:43,279 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:43,638 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:43,697 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:43,840 | INFO     | [job] control thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,060 | INFO     | [job] validate thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,093 | INFO     | [data] control thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,129 | INFO     | [payload] control thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,141 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,235 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,354 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,534 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:44,567 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:45,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:36:12] 2025-07-27 18:35:49,642 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:53,158 | INFO     | job.realtimelogging is not enabled
[2025-07-27 14:36:12] 2025-07-27 18:35:54,163 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:36:12] 2025-07-27 18:35:56,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908225681216)>', '<ExcThread(monitor, started 139907720787712)>']
[2025-07-27 14:36:12] 2025-07-27 18:36:01,182 | INFO     | all workflow threads have been joined
[2025-07-27 14:36:12] 2025-07-27 18:36:01,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:36:12] 2025-07-27 18:36:01,183 | INFO     | traces error code: 0
[2025-07-27 14:36:12] 2025-07-27 18:36:01,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:36:12] 2025-07-27 18:36:11,327 | INFO     | 6005s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | INFO     | PID=3344933 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | INFO     | .. there are 6 such processes running
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:36:12] 2025-07-27 18:36:12,584 | INFO     | [monitor] control thread has ended
[2025-07-27 14:36:12] 2025-07-27 18:36:12,728 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:36:12] 2025-07-27 18:36:12,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:36:12] 2025-07-27 18:36:12,734 [wrapper] pilotpid: 3344933
[2025-07-27 14:36:12] 2025-07-27 18:36:12,737 [wrapper] Pilot exit status: 0
[2025-07-27 14:36:12] 2025-07-27 18:36:12,747 [wrapper] pandaids: 6747376575
[2025-07-27 14:36:12] 2025-07-27 18:36:12,786 [wrapper] cleanup supervisor_pilot 3447794 3344934
[2025-07-27 14:36:12] 2025-07-27 18:36:12,789 [wrapper] Test setup, not cleaning
[2025-07-27 14:36:12] 2025-07-27 18:36:12,792 [wrapper] apfmon messages muted
[2025-07-27 14:36:12] 2025-07-27 18:36:12,795 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:36:12] 2025-07-27 18:36:12,798 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:36:12]  *** Error codes and diagnostics ***
[2025-07-27 14:36:12]     "exeErrorCode": 0,
[2025-07-27 14:36:12]     "exeErrorDiag": "",
[2025-07-27 14:36:12]     "pilotErrorCode": 0,
[2025-07-27 14:36:12]     "pilotErrorDiag": "",
[2025-07-27 14:36:12]  *** Listing of results directory ***
[2025-07-27 14:36:12] total 349404
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 14:36:12] -rwx------. 1 boincer umatlas     36292 Jul 27 07:47 runpilot2-wrapper.sh
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:47 queuedata.json
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas       100 Jul 27 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:36:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 12:55 run_atlas
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas       105 Jul 27 12:55 job.xml
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas 148501924 Jul 27 12:55 EVNT.45743347._002652.pool.root.1
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:55 start_atlas.sh
[2025-07-27 14:36:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 12:55 shared
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 12:55 input.tar.gz
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas         0 Jul 27 12:55 boinc_lockfile
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 12:55 pandaJob.out
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas    980125 Jul 27 12:55 agis_schedconf.cvmfs.json
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas   1593052 Jul 27 12:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:36:12] drwx------. 4 boincer umatlas      4096 Jul 27 12:55 pilot3
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 14:28 init_data.xml
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas 203564769 Jul 27 14:34 HITS.45743349._047784.pool.root.1
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas       529 Jul 27 14:34 boinc_task_state.xml
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas      1028 Jul 27 14:35 memory_monitor_summary.json
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas    345236 Jul 27 14:35 log.45743349._047784.job.log.tgz.1
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas        95 Jul 27 14:35 pilot_heartbeat.json
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas      7808 Jul 27 14:35 heartbeat.json
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas        27 Jul 27 14:36 wrapper_checkpoint.txt
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 14:36 boinc_mmap_file
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas       937 Jul 27 14:36 pilotlog.txt
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas    581257 Jul 27 14:36 log.45743349._047784.job.log.1
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas       357 Jul 27 14:36 output.list
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas       620 Jul 27 14:36 runtime_log
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas    942080 Jul 27 14:36 result.tar.gz
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 14:36 runtime_log.err
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas       653 Jul 27 14:36 EKTMDmM2E07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg9ULDmK2kmem.diag
[2025-07-27 14:36:12] -rw-r--r--. 1 boincer umatlas     21742 Jul 27 14:36 stderr.txt
[2025-07-27 14:36:12] HITS file was successfully produced:
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas 203564769 Jul 27 14:34 shared/HITS.pool.root.1
[2025-07-27 14:36:12]  *** Contents of shared directory: ***
[2025-07-27 14:36:12] total 345292
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas 148501924 Jul 27 12:55 ATLAS.root_0
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 12:55 start_atlas.sh
[2025-07-27 14:36:12] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 12:55 input.tar.gz
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas 203564769 Jul 27 14:34 HITS.pool.root.1
[2025-07-27 14:36:12] -rw-------. 1 boincer umatlas    942080 Jul 27 14:36 result.tar.gz
14:36:14 (3340863): run_atlas exited; CPU time 54317.381973
14:36:14 (3340863): called boinc_finish(0)

</stderr_txt>
]]>

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