Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:26:01 (1997236): wrapper (7.7.26015): starting
08:26:01 (1997236): wrapper: running run_atlas (--nthreads 6)
[2025-07-28 08:26:01] Arguments: --nthreads 6
[2025-07-28 08:26:01] Threads: 6
[2025-07-28 08:26:01] Checking for CVMFS
[2025-07-28 08:26:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 08:26:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 08:26:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 08:26:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 08:26:02] 2.11.5.0 3681660 4784 88864 148828 1 57 20542833 20971521 929 130560 0 6895324 99.995 170025 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-07-28 08:26:02] CVMFS is ok
[2025-07-28 08:26:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 08:26:02] Checking for apptainer binary...
[2025-07-28 08:26:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 08:26:02] Running /usr/bin/apptainer --version
[2025-07-28 08:26:02] apptainer version 1.3.6-1.el9
[2025-07-28 08:26:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 08:26:02] testio006
[2025-07-28 08:26:02] apptainer works
[2025-07-28 08:26:02] Set ATHENA_PROC_NUMBER=6
[2025-07-28 08:26:02] Set ATHENA_CORE_NUMBER=6
[2025-07-28 08:26:02] Starting ATLAS job with PandaID=6744951972
[2025-07-28 08:26:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 10:03:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 10:03:22]  is_altstaged=None
[2025-07-28 10:03:22]  is_tar=False
[2025-07-28 10:03:22]  lfn=log.45743349._016188.job.log.tgz.1
[2025-07-28 10:03:22]  mtime=0
[2025-07-28 10:03:22]  protocol_id=None
[2025-07-28 10:03:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 10:03:22]  replicas=None
[2025-07-28 10:03:22]  scope=mc23_13p6TeV
[2025-07-28 10:03:22]  status=None
[2025-07-28 10:03:22]  status_code=0
[2025-07-28 10:03:22]  storage_token=
[2025-07-28 10:03:22]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6744951972/log.45743349._016188.job.log.tgz.1
[2025-07-28 10:03:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/f7/log.45743349._016188.job.log.tgz.1
[2025-07-28 10:03:22]  workdir=None
[2025-07-28 10:03:22] ]
[2025-07-28 10:03:22] 2025-07-28 01:02:47,727 | INFO     | transferring file log.45743349._016188.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6744951972/log.45743349._016188.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 10:03:22] 2025-07-28 01:02:47,728 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6744951972/log.45743349._016188.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._016188.job
[2025-07-28 10:03:22] 2025-07-28 01:02:47,738 | INFO     | adding to output.list: log.45743349._016188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/f7/log.45743349._016188.job.log.tg
[2025-07-28 10:03:22] 2025-07-28 01:02:47,739 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 10:03:22] 2025-07-28 01:02:47,739 | INFO     | summary of transferred files:
[2025-07-28 10:03:22] 2025-07-28 01:02:47,739 | INFO     |  -- lfn=log.45743349._016188.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 10:03:22] 2025-07-28 01:02:47,739 | INFO     | stage-out finished correctly
[2025-07-28 10:03:22] 2025-07-28 01:02:47,790 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | job 6744951972 has state=finished
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | preparing for final server update for job 6744951972 in state='finished'
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | this job has now completed (state=finished)
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | log transfer has been attempted: DONE
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | job 6744951972 has finished - writing final server update
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | total number of processed events: 400 (read)
[2025-07-28 10:03:22] 2025-07-28 01:02:47,897 | INFO     | executing command: lscpu
[2025-07-28 10:03:22] 2025-07-28 01:02:47,911 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 10:03:22] 2025-07-28 01:02:49,461 | INFO     | monitor loop #426: job 0:6744951972 is in state 'finished'
[2025-07-28 10:03:22] 2025-07-28 01:02:49,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,708 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 10:03:22] 2025-07-28 01:02:49,710 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4085.509
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6744951972/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | INFO     | extracted standard info from prmon json
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 10:03:22] 2025-07-28 01:02:49,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | fitting pss+swap vs Time
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | sum of square deviations: 211285822.0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | sum of deviations: 9433119574.5
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | mean x: 1753661746.5
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | mean y: 2460112.125
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | -- intersect: -78291960173.02318
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | intersect: -78291960173.02318
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | chi2: 1.5490153161330669
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | -- intersect: -78291960173.02318
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | current memory leak: 44.65 B/s (using 88 data points, chi2=1.55)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,714 | INFO     | could have reported an average CPU frequency of 3989 MHz (7 samples)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | ..............................
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . Timing measurements:
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . get job = 0 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . initial setup = 4 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . payload setup = 2 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . stage-in = 0 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . payload execution = 5777 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . stage-out = 0 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | . log creation = 0 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,715 | INFO     | ..............................
[2025-07-28 10:03:22] 2025-07-28 01:02:49,987 | INFO     | 
[2025-07-28 10:03:22] 2025-07-28 01:02:49,987 | INFO     | job summary report
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | --------------------------------------------------
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | PanDA job id: 6744951972
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | task id: 45743349
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | errors: (none)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | pilot state: finished 
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | transexitcode: 0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | exeerrorcode: 0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | exeerrordiag: 
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | exitcode: 0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | exitmsg: OK
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | cpuconsumptiontime: 30363 s
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | nevents: 400
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | neventsw: 0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | pid: 2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | pgrp: 2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | corecount: 6
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | event service: False
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | sizes: {0: 2397296, 1: 2397495, 3: 2397757, 11: 2397785, 5784: 2424491, 5785: 2433673, 5787: 2433811}
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | --------------------------------------------------
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | 
[2025-07-28 10:03:22] 2025-07-28 01:02:49,988 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 10:03:22] 2025-07-28 01:02:49,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | job 6744951972 has completed (purged errors)
[2025-07-28 10:03:22] 2025-07-28 01:02:49,999 | INFO     | overall cleanup function is called
[2025-07-28 10:03:22] 2025-07-28 01:02:51,006 | INFO     | --- collectZombieJob: --- 10, [2007531]
[2025-07-28 10:03:22] 2025-07-28 01:02:51,006 | INFO     | zombie collector waiting for pid 2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:51,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 10:03:22] 2025-07-28 01:02:51,006 | INFO     | collected zombie processes
[2025-07-28 10:03:22] 2025-07-28 01:02:51,006 | INFO     | will attempt to kill all subprocesses of pid=2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:51,066 | INFO     | process IDs to be killed: [2007531] (in reverse order)
[2025-07-28 10:03:22] 2025-07-28 01:02:51,092 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 10:03:22] 2025-07-28 01:02:51,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 10:03:22] 2025-07-28 01:02:51,094 | INFO     | did not find any defunct processes belonging to 2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:51,096 | INFO     | did not find any defunct processes belonging to 2007531
[2025-07-28 10:03:22] 2025-07-28 01:02:51,096 | INFO     | ready for new job
[2025-07-28 10:03:22] 2025-07-28 01:02:51,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 10:03:22] 2025-07-28 01:02:51,097 | INFO     | ***************************************
[2025-07-28 10:03:22] 2025-07-28 01:02:51,097 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 10:03:22] 2025-07-28 01:02:51,097 | INFO     | ***************************************
[2025-07-28 10:03:22] 2025-07-28 01:02:51,097 | INFO     | 
[2025-07-28 10:03:22] 2025-07-28 01:02:51,098 | INFO     | architecture information:
[2025-07-28 10:03:22] 2025-07-28 01:02:51,098 | INFO     | executing command: cat /etc/os-release
[2025-07-28 10:03:22] 2025-07-28 01:02:51,106 | INFO     | cat /etc/os-release:
[2025-07-28 10:03:22] NAME="CentOS Linux"
[2025-07-28 10:03:22] VERSION="7 (Core)"
[2025-07-28 10:03:22] ID="centos"
[2025-07-28 10:03:22] ID_LIKE="rhel fedora"
[2025-07-28 10:03:22] VERSION_ID="7"
[2025-07-28 10:03:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 10:03:22] ANSI_COLOR="0;31"
[2025-07-28 10:03:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 10:03:22] HOME_URL="https://www.centos.org/"
[2025-07-28 10:03:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 10:03:22] 
[2025-07-28 10:03:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 10:03:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 10:03:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 10:03:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 10:03:22] 
[2025-07-28 10:03:22] 2025-07-28 01:02:51,106 | INFO     | ***************************************
[2025-07-28 10:03:22] 2025-07-28 01:02:51,609 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | INFO     | sufficient remaining disk space (77793853440 B)
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | INFO     | update_server=False
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:03:22] 2025-07-28 01:02:51,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 10:03:22] 2025-07-28 01:02:51,840 | INFO     | all data control threads have been joined
[2025-07-28 10:03:22] 2025-07-28 01:02:51,964 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 10:03:22] 2025-07-28 01:02:51,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 10:03:22] 2025-07-28 01:02:51,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:03:22] 2025-07-28 01:02:51,965 | INFO     | will abort loop
[2025-07-28 10:03:22] 2025-07-28 01:02:52,587 | INFO     | all payload control threads have been joined
[2025-07-28 10:03:22] 2025-07-28 01:02:52,623 | INFO     | [job] queue monitor thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,623 | INFO     | [job] retrieve thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,799 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,821 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,845 | INFO     | [data] control thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,858 | INFO     | all job control threads have been joined
[2025-07-28 10:03:22] 2025-07-28 01:02:52,931 | INFO     | [payload] validate_post thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:52,970 | INFO     | [job] job monitor thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,345 | INFO     | [data] copytool_in thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,593 | INFO     | [payload] control thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,623 | INFO     | [data] copytool_out thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 10:03:22] 2025-07-28 01:02:53,863 | INFO     | [job] control thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,895 | INFO     | [payload] failed_post thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,936 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:53,953 | INFO     | [job] validate thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:02:57,850 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:03:02,493 | INFO     | job.realtimelogging is not enabled
[2025-07-28 10:03:22] 2025-07-28 01:03:03,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 10:03:22] 2025-07-28 01:03:04,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796646307648)>', '<ExcThread(monitor, started 139796001314560)>']
[2025-07-28 10:03:22] 2025-07-28 01:03:09,089 | INFO     | all workflow threads have been joined
[2025-07-28 10:03:22] 2025-07-28 01:03:09,089 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 10:03:22] 2025-07-28 01:03:09,089 | INFO     | traces error code: 0
[2025-07-28 10:03:22] 2025-07-28 01:03:09,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | INFO     | PID=2000957 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | INFO     | .. there are 2 such processes running
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 10:03:22] 2025-07-28 01:03:21,994 | INFO     | [monitor] control thread has ended
[2025-07-28 10:03:22] 2025-07-28 01:03:22,053 [wrapper] ==== pilot stdout END ====
[2025-07-28 10:03:22] 2025-07-28 01:03:22,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 10:03:22] 2025-07-28 01:03:22,055 [wrapper] pilotpid: 2000957
[2025-07-28 10:03:22] 2025-07-28 01:03:22,057 [wrapper] Pilot exit status: 0
[2025-07-28 10:03:22] 2025-07-28 01:03:22,062 [wrapper] pandaids: 6744951972
[2025-07-28 10:03:22] 2025-07-28 01:03:22,080 [wrapper] cleanup supervisor_pilot 2042302 2000958
[2025-07-28 10:03:22] 2025-07-28 01:03:22,081 [wrapper] Test setup, not cleaning
[2025-07-28 10:03:22] 2025-07-28 01:03:22,083 [wrapper] apfmon messages muted
[2025-07-28 10:03:22] 2025-07-28 01:03:22,084 [wrapper] ==== wrapper stdout END ====
[2025-07-28 10:03:22] 2025-07-28 01:03:22,085 [wrapper] ==== wrapper stderr END ====
[2025-07-28 10:03:22]  *** Error codes and diagnostics ***
[2025-07-28 10:03:22]     "exeErrorCode": 0,
[2025-07-28 10:03:22]     "exeErrorDiag": "",
[2025-07-28 10:03:22]     "pilotErrorCode": 0,
[2025-07-28 10:03:22]     "pilotErrorDiag": "",
[2025-07-28 10:03:22]  *** Listing of results directory ***
[2025-07-28 10:03:22] total 352144
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc    530466 Jul 25 13:28 pilot3.tar.gz
[2025-07-28 10:03:22] -rwx------. 1 boinc boinc     36292 Jul 25 13:39 runpilot2-wrapper.sh
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc      5112 Jul 25 13:39 queuedata.json
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc       100 Jul 28 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 10:03:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 08:26 run_atlas
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc       105 Jul 28 08:26 job.xml
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc      9464 Jul 28 08:26 init_data.xml
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc 143605598 Jul 28 08:26 EVNT.45743347._000907.pool.root.1
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc     15095 Jul 28 08:26 start_atlas.sh
[2025-07-28 10:03:22] drwxrwx--x. 2 boinc boinc        68 Jul 28 08:26 shared
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc    542880 Jul 28 08:26 input.tar.gz
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc         0 Jul 28 08:26 boinc_lockfile
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc      2559 Jul 28 08:26 pandaJob.out
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc    980125 Jul 28 08:26 agis_schedconf.cvmfs.json
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc   1593052 Jul 28 08:26 agis_ddmendpoints.agis.ALL.json
[2025-07-28 10:03:22] drwx------. 4 boinc boinc      4096 Jul 28 08:26 pilot3
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc 211468258 Jul 28 10:02 HITS.45743349._016188.pool.root.1
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc       529 Jul 28 10:02 boinc_task_state.xml
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc      1019 Jul 28 10:02 memory_monitor_summary.json
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc    270783 Jul 28 10:02 log.45743349._016188.job.log.tgz.1
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc      7748 Jul 28 10:02 heartbeat.json
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc        95 Jul 28 10:02 pilot_heartbeat.json
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc      8192 Jul 28 10:03 boinc_mmap_file
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc        27 Jul 28 10:03 wrapper_checkpoint.txt
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc       822 Jul 28 10:03 pilotlog.txt
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc    556782 Jul 28 10:03 log.45743349._016188.job.log.1
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc       357 Jul 28 10:03 output.list
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc       620 Jul 28 10:03 runtime_log
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc    849920 Jul 28 10:03 result.tar.gz
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc      8618 Jul 28 10:03 runtime_log.err
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc       641 Jul 28 10:03 2p5MDm9NPz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwhOLDmsA0Afn.diag
[2025-07-28 10:03:22] -rw-r--r--. 1 boinc boinc     21101 Jul 28 10:03 stderr.txt
[2025-07-28 10:03:22] HITS file was successfully produced:
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc 211468258 Jul 28 10:02 shared/HITS.pool.root.1
[2025-07-28 10:03:22]  *** Contents of shared directory: ***
[2025-07-28 10:03:22] total 348132
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc 143605598 Jul 28 08:26 ATLAS.root_0
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc     15095 Jul 28 08:26 start_atlas.sh
[2025-07-28 10:03:22] -rw-r--r--. 2 boinc boinc    542880 Jul 28 08:26 input.tar.gz
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc 211468258 Jul 28 10:02 HITS.pool.root.1
[2025-07-28 10:03:22] -rw-------. 1 boinc boinc    849920 Jul 28 10:03 result.tar.gz
10:03:23 (1997236): run_atlas exited; CPU time 30409.787734
10:03:23 (1997236): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN