Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:24:55 (2327280): wrapper (7.7.26015): starting
20:24:55 (2327280): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 20:24:55] Arguments: --nthreads 4
[2025-07-29 20:24:55] Threads: 4
[2025-07-29 20:24:55] Checking for CVMFS
[2025-07-29 20:24:55] No cvmfs_config command found, will try listing directly
[2025-07-29 20:24:55] CVMFS is ok
[2025-07-29 20:24:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 20:24:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 20:24:55] Further information can be found at the LHC@home message board.
[2025-07-29 20:24:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 20:24:55] Checking for apptainer binary...
[2025-07-29 20:24:55] which: no apptainer in ((null))
[2025-07-29 20:24:55] apptainer is not installed, using version from CVMFS
[2025-07-29 20:24:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 20:24:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-29 20:24:55] apptainer works
[2025-07-29 20:24:55] Set ATHENA_PROC_NUMBER=4
[2025-07-29 20:24:55] Set ATHENA_CORE_NUMBER=4
[2025-07-29 20:24:55] Starting ATLAS job with PandaID=6746125867
[2025-07-29 20:24:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:17:18 (2515156): wrapper (7.7.26015): starting
21:17:18 (2515156): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 21:17:18] Arguments: --nthreads 4
[2025-07-29 21:17:18] Threads: 4
[2025-07-29 21:17:18] This job has been restarted, cleaning up previous attempt
[2025-07-29 21:17:18] Checking for CVMFS
[2025-07-29 21:17:18] No cvmfs_config command found, will try listing directly
[2025-07-29 21:17:18] CVMFS is ok
[2025-07-29 21:17:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 21:17:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 21:17:18] Further information can be found at the LHC@home message board.
[2025-07-29 21:17:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 21:17:18] Checking for apptainer binary...
[2025-07-29 21:17:18] which: no apptainer in ((null))
[2025-07-29 21:17:18] apptainer is not installed, using version from CVMFS
[2025-07-29 21:17:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 21:17:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-07-29 21:17:18] apptainer works
[2025-07-29 21:17:18] Set ATHENA_PROC_NUMBER=4
[2025-07-29 21:17:18] Set ATHENA_CORE_NUMBER=4
[2025-07-29 21:17:18] Starting ATLAS job with PandaID=6746125867
[2025-07-29 21:17:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-30 00:41:07]  *** The last 200 lines of the pilot log: ***
[2025-07-30 00:41:07] 2025-07-29 22:40:34,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-30 00:41:07] 2025-07-29 22:40:34,717 | INFO     | fitting pss+swap vs Time
[2025-07-30 00:41:07] 2025-07-29 22:40:34,717 | INFO     | sum of square deviations: 2443580700.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,718 | INFO     | sum of deviations: 14339417132.000004
[2025-07-30 00:41:07] 2025-07-29 22:40:34,719 | INFO     | mean x: 1753822727.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,719 | INFO     | mean y: 2318413.814070352
[2025-07-30 00:41:07] 2025-07-29 22:40:34,719 | INFO     | -- intersect: -10289461865.03441
[2025-07-30 00:41:07] 2025-07-29 22:40:34,719 | INFO     | intersect: -10289461865.03441
[2025-07-30 00:41:07] 2025-07-29 22:40:34,719 | INFO     | chi2: 1.310251864987966
[2025-07-30 00:41:07] 2025-07-29 22:40:34,720 | INFO     | sum of square deviations: 2263977332.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,721 | INFO     | sum of deviations: 13691139205.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,721 | INFO     | mean x: 1753822574.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,721 | INFO     | mean y: 2317863.2268041237
[2025-07-30 00:41:07] 2025-07-29 22:40:34,721 | INFO     | -- intersect: -10603719866.76932
[2025-07-30 00:41:07] 2025-07-29 22:40:34,721 | INFO     | intersect: -10603719866.76932
[2025-07-30 00:41:07] 2025-07-29 22:40:34,722 | INFO     | chi2: 1.3108474850380183
[2025-07-30 00:41:07] 2025-07-29 22:40:34,722 | INFO     | current chi2=1.3108474850380183 (change=-0.04545843940147988 %)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,722 | INFO     | right removable region: 193
[2025-07-30 00:41:07] 2025-07-29 22:40:34,722 | INFO     | sum of square deviations: 2263977332.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,723 | INFO     | sum of deviations: -7812564660.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,723 | INFO     | mean x: 1753822879.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,723 | INFO     | mean y: 2336912.355670103
[2025-07-30 00:41:07] 2025-07-29 22:40:34,724 | INFO     | -- intersect: 6054453447.474755
[2025-07-30 00:41:07] 2025-07-29 22:40:34,724 | INFO     | intersect: 6054453447.474755
[2025-07-30 00:41:07] 2025-07-29 22:40:34,724 | INFO     | chi2: 0.010393062401729544
[2025-07-30 00:41:07] 2025-07-29 22:40:34,724 | INFO     | current chi2=0.010393062401729544 (change=99.2067889632941 %)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,724 | INFO     | sum of square deviations: 2093397390.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | sum of deviations: -5280068560.999998
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | mean x: 1753823032.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | mean y: 2334646.312169312
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | -- intersect: 4425912270.444438
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | intersect: 4425912270.444438
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | chi2: 0.006023786127253019
[2025-07-30 00:41:07] 2025-07-29 22:40:34,726 | INFO     | current chi2=0.006023786127253019 (change=42.04031598760938 %)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,727 | INFO     | sum of square deviations: 1931608310.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | sum of deviations: -3943574939.4999995
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | mean x: 1753823184.5
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | mean y: 2333391.777173913
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | -- intersect: 3582941904.8500357
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | intersect: 3582941904.8500357
[2025-07-30 00:41:07] 2025-07-29 22:40:34,728 | INFO     | chi2: 0.004809436176515969
[2025-07-30 00:41:07] 2025-07-29 22:40:34,729 | INFO     | current chi2=0.004809436176515969 (change=20.159247441456234 %)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,729 | INFO     | left removable region: 30
[2025-07-30 00:41:07] 2025-07-29 22:40:34,729 | INFO     | sum of square deviations: 1342841922.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | sum of deviations: -2625889020.9999976
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | mean x: 1753823459.0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | mean y: 2331459.4478527606
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | -- intersect: 3431883136.6111903
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | intersect: 3431883136.6111903
[2025-07-30 00:41:07] 2025-07-29 22:40:34,730 | INFO     | chi2: 0.004213897582006523
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | -- intersect: 3431883136.6111903
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | current memory leak: -1.96 B/s (using 163 data points, chi2=0.00)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | could have reported an average CPU frequency of 2724 MHz (10 samples)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | ..............................
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | . Timing measurements:
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | . get job = 0 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,731 | INFO     | . initial setup = 1 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | . payload setup = 10 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | . stage-in = 0 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | . payload execution = 12140 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | . stage-out = 0 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | . log creation = 0 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,732 | INFO     | ..............................
[2025-07-30 00:41:07] 2025-07-29 22:40:34,942 | INFO     | 
[2025-07-30 00:41:07] 2025-07-29 22:40:34,942 | INFO     | job summary report
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | --------------------------------------------------
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | PanDA job id: 6746125867
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | task id: 45759816
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | errors: (none)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | pilot state: finished 
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | transexitcode: 0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | exeerrorcode: 0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | exeerrordiag: 
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | exitcode: 0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | exitmsg: OK
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | cpuconsumptiontime: 46418 s
[2025-07-30 00:41:07] 2025-07-29 22:40:34,943 | INFO     | nevents: 400
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | neventsw: 0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | pid: 2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | pgrp: 2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | corecount: 4
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | event service: False
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | sizes: {0: 2391914, 7: 2392176, 11: 2392204, 12155: 2422341, 12157: 2431417, 12165: 2431555}
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | --------------------------------------------------
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | 
[2025-07-30 00:41:07] 2025-07-29 22:40:34,944 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-07-30 00:41:07] 2025-07-29 22:40:34,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-30 00:41:07] 2025-07-29 22:40:34,973 | INFO     | job 6746125867 has completed (purged errors)
[2025-07-30 00:41:07] 2025-07-29 22:40:34,973 | INFO     | overall cleanup function is called
[2025-07-30 00:41:07] 2025-07-29 22:40:35,982 | INFO     | --- collectZombieJob: --- 10, [2537501]
[2025-07-30 00:41:07] 2025-07-29 22:40:35,982 | INFO     | zombie collector waiting for pid 2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:35,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-30 00:41:07] 2025-07-29 22:40:35,982 | INFO     | collected zombie processes
[2025-07-30 00:41:07] 2025-07-29 22:40:35,983 | INFO     | will attempt to kill all subprocesses of pid=2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:36,664 | INFO     | process IDs to be killed: [2537501] (in reverse order)
[2025-07-30 00:41:07] 2025-07-29 22:40:36,928 | WARNING  | found no corresponding commands to process id(s)
[2025-07-30 00:41:07] 2025-07-29 22:40:36,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-30 00:41:07] 2025-07-29 22:40:36,952 | INFO     | did not find any defunct processes belonging to 2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:36,972 | INFO     | did not find any defunct processes belonging to 2537501
[2025-07-30 00:41:07] 2025-07-29 22:40:36,972 | INFO     | ready for new job
[2025-07-30 00:41:07] 2025-07-29 22:40:36,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-30 00:41:07] 2025-07-29 22:40:36,974 | INFO     | ***************************************
[2025-07-30 00:41:07] 2025-07-29 22:40:36,975 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-30 00:41:07] 2025-07-29 22:40:36,975 | INFO     | ***************************************
[2025-07-30 00:41:07] 2025-07-29 22:40:36,975 | INFO     | 
[2025-07-30 00:41:07] 2025-07-29 22:40:36,983 | INFO     | architecture information:
[2025-07-30 00:41:07] 2025-07-29 22:40:36,983 | INFO     | executing command: cat /etc/os-release
[2025-07-30 00:41:07] 2025-07-29 22:40:37,005 | INFO     | cat /etc/os-release:
[2025-07-30 00:41:07] NAME="CentOS Linux"
[2025-07-30 00:41:07] VERSION="7 (Core)"
[2025-07-30 00:41:07] ID="centos"
[2025-07-30 00:41:07] ID_LIKE="rhel fedora"
[2025-07-30 00:41:07] VERSION_ID="7"
[2025-07-30 00:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-30 00:41:07] ANSI_COLOR="0;31"
[2025-07-30 00:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-30 00:41:07] HOME_URL="https://www.centos.org/"
[2025-07-30 00:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-30 00:41:07] 
[2025-07-30 00:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-30 00:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-30 00:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-30 00:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-30 00:41:07] 
[2025-07-30 00:41:07] 2025-07-29 22:40:37,006 | INFO     | ***************************************
[2025-07-30 00:41:07] 2025-07-29 22:40:37,508 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-07-30 00:41:07] 2025-07-29 22:40:37,533 | INFO     | sufficient remaining disk space (3352859508736 B)
[2025-07-30 00:41:07] 2025-07-29 22:40:37,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-30 00:41:07] 2025-07-29 22:40:37,534 | INFO     | current server update state: UPDATING_FINAL
[2025-07-30 00:41:07] 2025-07-29 22:40:37,534 | INFO     | update_server=False
[2025-07-30 00:41:07] 2025-07-29 22:40:37,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-30 00:41:07] 2025-07-29 22:40:37,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-30 00:41:07] 2025-07-29 22:40:37,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-30 00:41:07] 2025-07-29 22:40:37,631 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-30 00:41:07] 2025-07-29 22:40:37,631 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-30 00:41:07] 2025-07-29 22:40:37,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-30 00:41:07] 2025-07-29 22:40:37,632 | INFO     | will abort loop
[2025-07-30 00:41:07] 2025-07-29 22:40:38,000 | INFO     | all payload control threads have been joined
[2025-07-30 00:41:07] 2025-07-29 22:40:38,198 | INFO     | all data control threads have been joined
[2025-07-30 00:41:07] 2025-07-29 22:40:38,539 | INFO     | [job] retrieve thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:38,636 | INFO     | [job] job monitor thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:38,876 | INFO     | [payload] validate_post thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,005 | INFO     | [payload] control thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,184 | INFO     | [payload] execute_payloads thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,203 | INFO     | [data] control thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,205 | INFO     | [data] copytool_in thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,221 | INFO     | all job control threads have been joined
[2025-07-30 00:41:07] 2025-07-29 22:40:39,300 | INFO     | [job] validate thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,540 | INFO     | [data] copytool_out thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,564 | INFO     | [payload] validate_pre thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,583 | INFO     | [payload] failed_post thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:39,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-30 00:41:07] 2025-07-29 22:40:39,961 | INFO     | [job] create_data_payload thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:40,226 | INFO     | [job] control thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:40,842 | INFO     | [job] queue monitor thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:41,536 | INFO     | [data] queue_monitor thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:48,044 | INFO     | job.realtimelogging is not enabled
[2025-07-30 00:41:07] 2025-07-29 22:40:49,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-30 00:41:07] 2025-07-29 22:40:49,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23120124274496)>', '<ExcThread(monitor, started 23119892813568)>']
[2025-07-30 00:41:07] 2025-07-29 22:40:54,747 | INFO     | all workflow threads have been joined
[2025-07-30 00:41:07] 2025-07-29 22:40:54,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-30 00:41:07] 2025-07-29 22:40:54,748 | INFO     | traces error code: 0
[2025-07-30 00:41:07] 2025-07-29 22:40:54,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-30 00:41:07] 2025-07-29 22:41:07,044 | INFO     | PID=2522899 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | INFO     | .. there are 26 such processes running
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | INFO     | found 0 job(s) in 20 queues
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-30 00:41:07] 2025-07-29 22:41:07,045 | INFO     | [monitor] control thread has ended
[2025-07-30 00:41:07] 2025-07-29 22:41:07,266 [wrapper] ==== pilot stdout END ====
[2025-07-30 00:41:07] 2025-07-29 22:41:07,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-30 00:41:07] 2025-07-29 22:41:07,275 [wrapper] pilotpid: 2522899
[2025-07-30 00:41:07] 2025-07-29 22:41:07,279 [wrapper] Pilot exit status: 0
[2025-07-30 00:41:07] 2025-07-29 22:41:07,295 [wrapper] pandaids: 6746125867 6746125867
[2025-07-30 00:41:07] 2025-07-29 22:41:07,449 [wrapper] cleanup supervisor_pilot 3618562 2522900
[2025-07-30 00:41:07] 2025-07-29 22:41:07,454 [wrapper] Test setup, not cleaning
[2025-07-30 00:41:07] 2025-07-29 22:41:07,458 [wrapper] apfmon messages muted
[2025-07-30 00:41:07] 2025-07-29 22:41:07,461 [wrapper] ==== wrapper stdout END ====
[2025-07-30 00:41:07] 2025-07-29 22:41:07,464 [wrapper] ==== wrapper stderr END ====
[2025-07-30 00:41:07]  *** Error codes and diagnostics ***
[2025-07-30 00:41:07]     "exeErrorCode": 0,
[2025-07-30 00:41:07]     "exeErrorDiag": "",
[2025-07-30 00:41:07]     "pilotErrorCode": 0,
[2025-07-30 00:41:07]     "pilotErrorDiag": "",
[2025-07-30 00:41:07]  *** Listing of results directory ***
[2025-07-30 00:41:07] total 626528
[2025-07-30 00:41:07] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc    530466 Jul 27 07:26 pilot3.tar.gz
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc      5112 Jul 27 07:33 queuedata.json
[2025-07-30 00:41:07] -rwx------ 1 boinc boinc     36292 Jul 27 07:35 runpilot2-wrapper.sh
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc       100 Jul 29 20:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-30 00:41:07] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 20:24 run_atlas
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc       105 Jul 29 20:24 job.xml
[2025-07-30 00:41:07] -rw-r--r-- 3 boinc boinc 237625924 Jul 29 20:24 EVNT.45759813._000004.pool.root.1
[2025-07-30 00:41:07] -rw-r--r-- 3 boinc boinc 237625924 Jul 29 20:24 ATLAS.root_0
[2025-07-30 00:41:07] -rw-r--r-- 2 boinc boinc     15095 Jul 29 20:24 start_atlas.sh
[2025-07-30 00:41:07] drwxrwx--x 2 boinc boinc      4096 Jul 29 20:24 shared
[2025-07-30 00:41:07] -rw-r--r-- 2 boinc boinc    542884 Jul 29 20:24 input.tar.gz
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc         0 Jul 29 20:24 boinc_lockfile
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc      2562 Jul 29 21:17 pandaJob.out
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc      6691 Jul 29 21:17 init_data.xml
[2025-07-30 00:41:07] -rw------- 1 boinc boinc    977324 Jul 29 21:17 agis_schedconf.cvmfs.json
[2025-07-30 00:41:07] -rw------- 1 boinc boinc 159559549 Jul 30 00:39 HITS.45759816._000088.pool.root.1
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc       530 Jul 30 00:40 boinc_task_state.xml
[2025-07-30 00:41:07] -rw------- 1 boinc boinc        97 Jul 30 00:40 pilot_heartbeat.json
[2025-07-30 00:41:07] -rw------- 1 boinc boinc      1029 Jul 30 00:40 memory_monitor_summary.json
[2025-07-30 00:41:07] -rw------- 1 boinc boinc   1589827 Jul 30 00:40 agis_ddmendpoints.agis.ALL.json
[2025-07-30 00:41:07] -rw------- 1 boinc boinc    317265 Jul 30 00:40 log.45759816._000088.job.log.tgz.1
[2025-07-30 00:41:07] -rw------- 1 boinc boinc      7777 Jul 30 00:40 heartbeat.json
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc      8192 Jul 30 00:40 boinc_mmap_file
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc        28 Jul 30 00:40 wrapper_checkpoint.txt
[2025-07-30 00:41:07] -rw------- 1 boinc boinc       823 Jul 30 00:41 pilotlog.txt
[2025-07-30 00:41:07] -rw------- 1 boinc boinc   1121862 Jul 30 00:41 log.45759816._000088.job.log.1
[2025-07-30 00:41:07] -rw------- 1 boinc boinc       357 Jul 30 00:41 output.list
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc       620 Jul 30 00:41 runtime_log
[2025-07-30 00:41:07] -rw------- 1 boinc boinc   1454080 Jul 30 00:41 result.tar.gz
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc      9104 Jul 30 00:41 runtime_log.err
[2025-07-30 00:41:07] -rw------- 1 boinc boinc       792 Jul 30 00:41 fDGNDmrD9z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7MULDmzMoEVn.diag
[2025-07-30 00:41:07] -rw-r--r-- 1 boinc boinc     22613 Jul 30 00:41 stderr.txt
[2025-07-30 00:41:07] HITS file was successfully produced:
[2025-07-30 00:41:07] -rw------- 1 boinc boinc 159559549 Jul 30 00:39 shared/HITS.pool.root.1
[2025-07-30 00:41:07]  *** Contents of shared directory: ***
[2025-07-30 00:41:07] total 389856
[2025-07-30 00:41:07] -rw-r--r-- 3 boinc boinc 237625924 Jul 29 20:24 ATLAS.root_0
[2025-07-30 00:41:07] -rw-r--r-- 2 boinc boinc     15095 Jul 29 20:24 start_atlas.sh
[2025-07-30 00:41:07] -rw-r--r-- 2 boinc boinc    542884 Jul 29 20:24 input.tar.gz
[2025-07-30 00:41:07] -rw------- 1 boinc boinc 159559549 Jul 30 00:39 HITS.pool.root.1
[2025-07-30 00:41:07] -rw------- 1 boinc boinc   1454080 Jul 30 00:41 result.tar.gz
00:41:08 (2515156): run_atlas exited; CPU time 47004.988300
00:41:08 (2515156): called boinc_finish(0)

</stderr_txt>
]]>

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