Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:55 (2120881): wrapper (7.7.26015): starting
01:13:55 (2120881): wrapper: running run_atlas (--nthreads 4)
[2025-07-31 01:13:55] Arguments: --nthreads 4
[2025-07-31 01:13:55] Threads: 4
[2025-07-31 01:13:55] Checking for CVMFS
[2025-07-31 01:13:55] No cvmfs_config command found, will try listing directly
[2025-07-31 01:13:55] CVMFS is ok
[2025-07-31 01:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-31 01:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-31 01:13:55] Further information can be found at the LHC@home message board.
[2025-07-31 01:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-31 01:13:55] Checking for apptainer binary...
[2025-07-31 01:13:55] which: no apptainer in ((null))
[2025-07-31 01:13:55] apptainer is not installed, using version from CVMFS
[2025-07-31 01:13:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-31 01:13:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-07-31 01:13:55] apptainer works
[2025-07-31 01:13:55] Set ATHENA_PROC_NUMBER=4
[2025-07-31 01:13:55] Set ATHENA_CORE_NUMBER=4
[2025-07-31 01:13:55] Starting ATLAS job with PandaID=6747412987
[2025-07-31 01:13:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-31 02:50:57]  *** The last 200 lines of the pilot log: ***
[2025-07-31 02:50:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-31 02:50:57]  replicas=None
[2025-07-31 02:50:57]  scope=mc23_13p6TeV
[2025-07-31 02:50:57]  status=None
[2025-07-31 02:50:57]  status_code=0
[2025-07-31 02:50:57]  storage_token=
[2025-07-31 02:50:57]  surl=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6747412987/log.45743349._049870.job.log.tgz.1
[2025-07-31 02:50:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/ac/log.45743349._049870.job.log.tgz.1
[2025-07-31 02:50:57]  workdir=None
[2025-07-31 02:50:57] ]
[2025-07-31 02:50:57] 2025-07-31 00:50:18,421 | INFO     | transferring file log.45743349._049870.job.log.tgz.1 from /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6747412987/log.45743349._049870.job.log.tgz.1 to /scratch/b
[2025-07-31 02:50:57] 2025-07-31 00:50:18,421 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6747412987/log.45743349._049870.job.log.tgz.1 /scratch/boinc/var/slot32/slots/0/lo
[2025-07-31 02:50:57] 2025-07-31 00:50:18,439 | INFO     | adding to output.list: log.45743349._049870.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/ac/log.45743349._049870.job.log.tg
[2025-07-31 02:50:57] 2025-07-31 00:50:18,439 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-31 02:50:57] 2025-07-31 00:50:18,439 | INFO     | summary of transferred files:
[2025-07-31 02:50:57] 2025-07-31 00:50:18,439 | INFO     |  -- lfn=log.45743349._049870.job.log.tgz.1, status_code=0, status=transferred
[2025-07-31 02:50:57] 2025-07-31 00:50:18,440 | INFO     | stage-out finished correctly
[2025-07-31 02:50:57] 2025-07-31 00:50:18,495 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-31 02:50:57] 2025-07-31 00:50:21,253 | INFO     | job 6747412987 has state=finished
[2025-07-31 02:50:57] 2025-07-31 00:50:21,254 | INFO     | preparing for final server update for job 6747412987 in state='finished'
[2025-07-31 02:50:57] 2025-07-31 00:50:21,254 | INFO     | this job has now completed (state=finished)
[2025-07-31 02:50:57] 2025-07-31 00:50:21,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-31 02:50:57] 2025-07-31 00:50:21,255 | INFO     | log transfer has been attempted: DONE
[2025-07-31 02:50:57] 2025-07-31 00:50:21,255 | INFO     | job 6747412987 has finished - writing final server update
[2025-07-31 02:50:57] 2025-07-31 00:50:21,255 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1603167/.job.ad'
[2025-07-31 02:50:57] 2025-07-31 00:50:21,255 | INFO     | total number of processed events: 400 (read)
[2025-07-31 02:50:57] 2025-07-31 00:50:21,256 | INFO     | executing command: lscpu
[2025-07-31 02:50:57] 2025-07-31 00:50:21,322 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-31 02:50:57] 2025-07-31 00:50:21,897 | WARNING  | process 2132184 can no longer be monitored (due to stat problems) - aborting
[2025-07-31 02:50:57] 2025-07-31 00:50:21,897 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6747412987/memory_monitor_summary.json (trf name=prmon)
[2025-07-31 02:50:57] 2025-07-31 00:50:22,161 | INFO     | number of running child processes to parent process 2132184: 1
[2025-07-31 02:50:57] 2025-07-31 00:50:22,161 | INFO     | maximum number of monitored processes: 6
[2025-07-31 02:50:57] 2025-07-31 00:50:24,664 | INFO     | monitor loop #429: job 0:6747412987 is in state 'finished'
[2025-07-31 02:50:57] 2025-07-31 00:50:24,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,746 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-31 02:50:57] 2025-07-31 00:50:24,758 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2672.9129921874996
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6747412987/memory_monitor_summary.json (trf name=prmon)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | INFO     | extracted standard info from prmon json
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | INFO     | extracted standard memory fields from prmon json
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-31 02:50:57] 2025-07-31 00:50:24,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | fitting pss+swap vs Time
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | sum of square deviations: 211285822.0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | sum of deviations: 1043087373.0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | mean x: 1753920224.5
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | mean y: 2345131.022727273
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | -- intersect: -8656503920.501778
[2025-07-31 02:50:57] 2025-07-31 00:50:24,774 | INFO     | intersect: -8656503920.501778
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | chi2: 0.0006153685638640939
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | -- intersect: -8656503920.501778
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | current memory leak: 4.94 B/s (using 88 data points, chi2=0.00)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | could have reported an average CPU frequency of 2678 MHz (7 samples)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | ..............................
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . Timing measurements:
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . get job = 0 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . initial setup = 1 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . payload setup = 5 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . stage-in = 0 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . payload execution = 5751 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . stage-out = 0 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | . log creation = 0 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,775 | INFO     | ..............................
[2025-07-31 02:50:57] 2025-07-31 00:50:24,831 | INFO     | 
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | job summary report
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | --------------------------------------------------
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | PanDA job id: 6747412987
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | task id: 45743349
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | errors: (none)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | pilot state: finished 
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | transexitcode: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | exeerrorcode: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,832 | INFO     | exeerrordiag: 
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | exitcode: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | exitmsg: OK
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | cpuconsumptiontime: 22069 s
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | nevents: 400
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | neventsw: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | pid: 2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | pgrp: 2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | corecount: 4
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | event service: False
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | sizes: {0: 2391920, 4: 2392182, 11: 2392210, 5760: 2419047, 5761: 2419046, 5762: 2428306, 5768: 2428444}
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | --------------------------------------------------
[2025-07-31 02:50:57] 2025-07-31 00:50:24,833 | INFO     | 
[2025-07-31 02:50:57] 2025-07-31 00:50:24,834 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | job 6747412987 has completed (purged errors)
[2025-07-31 02:50:57] 2025-07-31 00:50:24,856 | INFO     | overall cleanup function is called
[2025-07-31 02:50:57] 2025-07-31 00:50:25,864 | INFO     | --- collectZombieJob: --- 10, [2132184]
[2025-07-31 02:50:57] 2025-07-31 00:50:25,865 | INFO     | zombie collector waiting for pid 2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:25,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-31 02:50:57] 2025-07-31 00:50:25,865 | INFO     | collected zombie processes
[2025-07-31 02:50:57] 2025-07-31 00:50:25,865 | INFO     | will attempt to kill all subprocesses of pid=2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:26,131 | INFO     | process IDs to be killed: [2132184] (in reverse order)
[2025-07-31 02:50:57] 2025-07-31 00:50:26,232 | WARNING  | found no corresponding commands to process id(s)
[2025-07-31 02:50:57] 2025-07-31 00:50:26,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-31 02:50:57] 2025-07-31 00:50:26,244 | INFO     | did not find any defunct processes belonging to 2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:26,252 | INFO     | did not find any defunct processes belonging to 2132184
[2025-07-31 02:50:57] 2025-07-31 00:50:26,252 | INFO     | ready for new job
[2025-07-31 02:50:57] 2025-07-31 00:50:26,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-31 02:50:57] 2025-07-31 00:50:26,254 | INFO     | ***************************************
[2025-07-31 02:50:57] 2025-07-31 00:50:26,254 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-31 02:50:57] 2025-07-31 00:50:26,254 | INFO     | ***************************************
[2025-07-31 02:50:57] 2025-07-31 00:50:26,254 | INFO     | 
[2025-07-31 02:50:57] 2025-07-31 00:50:26,259 | INFO     | architecture information:
[2025-07-31 02:50:57] 2025-07-31 00:50:26,259 | INFO     | executing command: cat /etc/os-release
[2025-07-31 02:50:57] 2025-07-31 00:50:26,273 | INFO     | cat /etc/os-release:
[2025-07-31 02:50:57] NAME="CentOS Linux"
[2025-07-31 02:50:57] VERSION="7 (Core)"
[2025-07-31 02:50:57] ID="centos"
[2025-07-31 02:50:57] ID_LIKE="rhel fedora"
[2025-07-31 02:50:57] VERSION_ID="7"
[2025-07-31 02:50:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-31 02:50:57] ANSI_COLOR="0;31"
[2025-07-31 02:50:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-31 02:50:57] HOME_URL="https://www.centos.org/"
[2025-07-31 02:50:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-31 02:50:57] 
[2025-07-31 02:50:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-31 02:50:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-31 02:50:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-31 02:50:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-31 02:50:57] 
[2025-07-31 02:50:57] 2025-07-31 00:50:26,274 | INFO     | ***************************************
[2025-07-31 02:50:57] 2025-07-31 00:50:26,777 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-07-31 02:50:57] 2025-07-31 00:50:26,791 | INFO     | sufficient remaining disk space (3378297962496 B)
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | INFO     | current server update state: UPDATING_FINAL
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | INFO     | update_server=False
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-31 02:50:57] 2025-07-31 00:50:26,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-31 02:50:57] 2025-07-31 00:50:27,007 | INFO     | all data control threads have been joined
[2025-07-31 02:50:57] 2025-07-31 00:50:27,035 | INFO     | all job control threads have been joined
[2025-07-31 02:50:57] 2025-07-31 00:50:27,167 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-31 02:50:57] 2025-07-31 00:50:27,167 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-31 02:50:57] 2025-07-31 00:50:27,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-31 02:50:57] 2025-07-31 00:50:27,167 | INFO     | will abort loop
[2025-07-31 02:50:57] 2025-07-31 00:50:27,224 | INFO     | all payload control threads have been joined
[2025-07-31 02:50:57] 2025-07-31 00:50:27,797 | INFO     | [job] retrieve thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:27,797 | INFO     | [job] queue monitor thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:27,971 | INFO     | [payload] validate_post thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,013 | INFO     | [data] control thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,029 | INFO     | [job] validate thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,041 | INFO     | [job] control thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,109 | INFO     | [job] create_data_payload thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,172 | INFO     | [job] job monitor thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,230 | INFO     | [payload] control thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,380 | INFO     | [payload] validate_pre thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,619 | INFO     | [data] copytool_in thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,798 | INFO     | [data] copytool_out thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:28,813 | INFO     | [payload] execute_payloads thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:29,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-31 02:50:57] 2025-07-31 00:50:29,381 | INFO     | [payload] failed_post thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:33,074 | INFO     | [data] queue_monitor thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:37,137 | INFO     | job.realtimelogging is not enabled
[2025-07-31 02:50:57] 2025-07-31 00:50:38,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-31 02:50:57] 2025-07-31 00:50:40,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23162687547200)>', '<ExcThread(monitor, started 23162446112512)>']
[2025-07-31 02:50:57] 2025-07-31 00:50:45,152 | INFO     | all workflow threads have been joined
[2025-07-31 02:50:57] 2025-07-31 00:50:45,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-31 02:50:57] 2025-07-31 00:50:45,153 | INFO     | traces error code: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:45,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-31 02:50:57] 2025-07-31 00:50:57,208 | INFO     | PID=2124786 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | INFO     | .. there are 5 such processes running
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | INFO     | found 0 job(s) in 20 queues
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-31 02:50:57] 2025-07-31 00:50:57,209 | INFO     | [monitor] control thread has ended
[2025-07-31 02:50:57] 2025-07-31 00:50:57,319 [wrapper] ==== pilot stdout END ====
[2025-07-31 02:50:57] 2025-07-31 00:50:57,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-31 02:50:57] 2025-07-31 00:50:57,324 [wrapper] pilotpid: 2124786
[2025-07-31 02:50:57] 2025-07-31 00:50:57,327 [wrapper] Pilot exit status: 0
[2025-07-31 02:50:57] 2025-07-31 00:50:57,335 [wrapper] pandaids: 6747412987
[2025-07-31 02:50:57] 2025-07-31 00:50:57,407 [wrapper] cleanup supervisor_pilot 2276794 2124787
[2025-07-31 02:50:57] 2025-07-31 00:50:57,409 [wrapper] Test setup, not cleaning
[2025-07-31 02:50:57] 2025-07-31 00:50:57,411 [wrapper] apfmon messages muted
[2025-07-31 02:50:57] 2025-07-31 00:50:57,413 [wrapper] ==== wrapper stdout END ====
[2025-07-31 02:50:57] 2025-07-31 00:50:57,416 [wrapper] ==== wrapper stderr END ====
[2025-07-31 02:50:57]  *** Error codes and diagnostics ***
[2025-07-31 02:50:57]     "exeErrorCode": 0,
[2025-07-31 02:50:57]     "exeErrorDiag": "",
[2025-07-31 02:50:57]     "pilotErrorCode": 0,
[2025-07-31 02:50:57]     "pilotErrorDiag": "",
[2025-07-31 02:50:57]  *** Listing of results directory ***
[2025-07-31 02:50:57] total 350556
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc    530466 Jul 27 16:11 pilot3.tar.gz
[2025-07-31 02:50:57] -rwx------ 1 boinc boinc     36292 Jul 27 16:21 runpilot2-wrapper.sh
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc      5112 Jul 27 16:21 queuedata.json
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc       100 Jul 31 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-31 02:50:57] -rwxr-xr-x 1 boinc boinc      7986 Jul 31 01:13 run_atlas
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc       105 Jul 31 01:13 job.xml
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc 143981840 Jul 31 01:13 EVNT.45743347._002771.pool.root.1
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc    542892 Jul 31 01:13 input.tar.gz
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc      6685 Jul 31 01:13 init_data.xml
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc     15095 Jul 31 01:13 start_atlas.sh
[2025-07-31 02:50:57] drwxrwx--x 2 boinc boinc      4096 Jul 31 01:13 shared
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc         0 Jul 31 01:13 boinc_lockfile
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc      2563 Jul 31 01:13 pandaJob.out
[2025-07-31 02:50:57] -rw------- 1 boinc boinc    977340 Jul 31 01:14 agis_schedconf.cvmfs.json
[2025-07-31 02:50:57] -rw------- 1 boinc boinc   1589827 Jul 31 01:14 agis_ddmendpoints.agis.ALL.json
[2025-07-31 02:50:57] drwx------ 4 boinc boinc      4096 Jul 31 01:14 pilot3
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc       529 Jul 31 02:49 boinc_task_state.xml
[2025-07-31 02:50:57] -rw------- 1 boinc boinc 209467488 Jul 31 02:49 HITS.45743349._049870.pool.root.1
[2025-07-31 02:50:57] -rw------- 1 boinc boinc      1026 Jul 31 02:50 memory_monitor_summary.json
[2025-07-31 02:50:57] -rw------- 1 boinc boinc    253981 Jul 31 02:50 log.45743349._049870.job.log.tgz.1
[2025-07-31 02:50:57] -rw------- 1 boinc boinc      7780 Jul 31 02:50 heartbeat.json
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc      8192 Jul 31 02:50 boinc_mmap_file
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc        27 Jul 31 02:50 wrapper_checkpoint.txt
[2025-07-31 02:50:57] -rw------- 1 boinc boinc        95 Jul 31 02:50 pilot_heartbeat.json
[2025-07-31 02:50:57] -rw------- 1 boinc boinc       822 Jul 31 02:50 pilotlog.txt
[2025-07-31 02:50:57] -rw------- 1 boinc boinc    569443 Jul 31 02:50 log.45743349._049870.job.log.1
[2025-07-31 02:50:57] -rw------- 1 boinc boinc       357 Jul 31 02:50 output.list
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc       620 Jul 31 02:50 runtime_log
[2025-07-31 02:50:57] -rw------- 1 boinc boinc    839680 Jul 31 02:50 result.tar.gz
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc      9026 Jul 31 02:50 runtime_log.err
[2025-07-31 02:50:57] -rw------- 1 boinc boinc       661 Jul 31 02:50 2noMDmCRH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhWVLDmjTlkqn.diag
[2025-07-31 02:50:57] -rw-r--r-- 1 boinc boinc     21741 Jul 31 02:50 stderr.txt
[2025-07-31 02:50:57] HITS file was successfully produced:
[2025-07-31 02:50:57] -rw------- 1 boinc boinc 209467488 Jul 31 02:49 shared/HITS.pool.root.1
[2025-07-31 02:50:57]  *** Contents of shared directory: ***
[2025-07-31 02:50:57] total 346544
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc 143981840 Jul 31 01:13 ATLAS.root_0
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc    542892 Jul 31 01:13 input.tar.gz
[2025-07-31 02:50:57] -rw-r--r-- 2 boinc boinc     15095 Jul 31 01:13 start_atlas.sh
[2025-07-31 02:50:57] -rw------- 1 boinc boinc 209467488 Jul 31 02:49 HITS.pool.root.1
[2025-07-31 02:50:57] -rw------- 1 boinc boinc    839680 Jul 31 02:50 result.tar.gz
02:50:59 (2120881): run_atlas exited; CPU time 22187.389509
02:50:59 (2120881): called boinc_finish(0)

</stderr_txt>
]]>

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