Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:22:03 (629432): wrapper (7.7.26015): starting
07:22:03 (629432): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 07:22:03] Arguments: --nthreads 3
[2025-07-28 07:22:03] Threads: 3
[2025-07-28 07:22:03] Checking for CVMFS
[2025-07-28 07:22:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 07:22:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 07:22:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 07:22:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 07:22:03] 2.9.2.0 2452624 9184 87576 148837 1 56 30706551 36864001 0 130560 0 6271190 99.989 331405 2300 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 07:22:03] CVMFS is ok
[2025-07-28 07:22:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 07:22:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 07:22:03] Further information can be found at the LHC@home message board.
[2025-07-28 07:22:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 07:22:03] Checking for apptainer binary...
[2025-07-28 07:22:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 07:22:03] Running /usr/bin/apptainer --version
[2025-07-28 07:22:03] apptainer version 1.4.1-1.1
[2025-07-28 07:22:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 07:22:03] thA305
[2025-07-28 07:22:03] apptainer works
[2025-07-28 07:22:03] Set ATHENA_PROC_NUMBER=3
[2025-07-28 07:22:03] Set ATHENA_CORE_NUMBER=3
[2025-07-28 07:22:03] Starting ATLAS job with PandaID=6746046671
[2025-07-28 07:22:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 09:10:33]  *** The last 200 lines of the pilot log: ***
[2025-07-28 09:10:33] 2025-07-28 07:10:02,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | fitting pss+swap vs Time
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | sum of square deviations: 369281342.5
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | sum of deviations: -4737536330.000002
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | mean x: 1753683350.5
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | mean y: 2405602.6226415094
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | -- intersect: 22500532716.396004
[2025-07-28 09:10:33] 2025-07-28 07:10:02,415 | INFO     | intersect: 22500532716.396004
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | chi2: 1.5656594484976223
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | sum of square deviations: 319447850.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | sum of deviations: -3976175810.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | mean x: 1753683198.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | mean y: 2407934.5544554456
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | -- intersect: 21830548929.371105
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | intersect: 21830548929.371105
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | chi2: 1.5665132710799574
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | current chi2=1.5665132710799574 (change=-0.05453437419960266 %)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | right removable region: 100
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | sum of square deviations: 319447850.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | sum of deviations: -17670898033.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | mean x: 1753683503.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | mean y: 2443992.0594059406
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | -- intersect: 97010961544.03932
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | intersect: 97010961544.03932
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | chi2: 0.08797417929315053
[2025-07-28 09:10:33] 2025-07-28 07:10:02,416 | INFO     | current chi2=0.08797417929315053 (change=94.38101437847362 %)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | sum of square deviations: 274312120.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | sum of deviations: -15338161500.500002
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | mean x: 1753683655.5
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | mean y: 2436125.1770833335
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | -- intersect: 98059653315.74893
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | intersect: 98059653315.74893
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | chi2: 0.08748367714432471
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | current chi2=0.08748367714432471 (change=0.5575524009054392 %)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | left removable region: 20
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | sum of square deviations: 158737860.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | sum of deviations: -9601657054.0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | mean x: 1753683777.5
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | mean y: 2421361.025
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | -- intersect: 106078377107.92899
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | intersect: 106078377107.92899
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | chi2: 0.07953223997614584
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | -- intersect: 106078377107.92899
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | current memory leak: -60.49 B/s (using 80 data points, chi2=0.08)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,417 | INFO     | could have reported an average CPU frequency of 3790 MHz (7 samples)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | ..............................
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . Timing measurements:
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . get job = 0 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . initial setup = 1 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . payload setup = 3 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . stage-in = 0 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . payload execution = 6449 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . stage-out = 0 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | . log creation = 0 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,418 | INFO     | ..............................
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | 
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | job summary report
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | --------------------------------------------------
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | PanDA job id: 6746046671
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | task id: 45758433
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | errors: (none)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | pilot state: finished 
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | transexitcode: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | exeerrorcode: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | exeerrordiag: 
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | exitcode: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,448 | INFO     | exitmsg: OK
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | cpuconsumptiontime: 18682 s
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | nevents: 400
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | neventsw: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | pid: 639560
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | pgrp: 639560
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | corecount: 3
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | event service: False
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | sizes: {0: 2397474, 2: 2397736, 11: 2397764, 6456: 2433982, 6461: 2434120}
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | --------------------------------------------------
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | 
[2025-07-28 09:10:33] 2025-07-28 07:10:02,449 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 09:10:33] 2025-07-28 07:10:02,461 | INFO     | job 6746046671 has completed (purged errors)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,461 | INFO     | overall cleanup function is called
[2025-07-28 09:10:33] 2025-07-28 07:10:02,601 | WARNING  | process 639560 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 09:10:33] 2025-07-28 07:10:02,633 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,633 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,633 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6746046671/payload.stdout) since it has not been created yet
[2025-07-28 09:10:33] 2025-07-28 07:10:02,633 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 09:10:33] 2025-07-28 07:10:02,643 | INFO     | sufficient remaining disk space (229414797312 B)
[2025-07-28 09:10:33] 2025-07-28 07:10:02,644 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-28 09:10:33] 2025-07-28 07:10:02,644 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6746046671/HITS.45758433._000103.pool.root.1 since it does not exist
[2025-07-28 09:10:33] 2025-07-28 07:10:02,687 | INFO     | number of running child processes to parent process 639560: 1
[2025-07-28 09:10:33] 2025-07-28 07:10:02,687 | INFO     | maximum number of monitored processes: 6
[2025-07-28 09:10:33] 2025-07-28 07:10:02,687 | INFO     | aborting job monitoring since job object (job id=6746046671) has expired
[2025-07-28 09:10:33] 2025-07-28 07:10:03,467 | INFO     | --- collectZombieJob: --- 10, [639560]
[2025-07-28 09:10:33] 2025-07-28 07:10:03,467 | INFO     | zombie collector waiting for pid 639560
[2025-07-28 09:10:33] 2025-07-28 07:10:03,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 09:10:33] 2025-07-28 07:10:03,467 | INFO     | collected zombie processes
[2025-07-28 09:10:33] 2025-07-28 07:10:03,467 | INFO     | will attempt to kill all subprocesses of pid=639560
[2025-07-28 09:10:33] 2025-07-28 07:10:03,513 | INFO     | process IDs to be killed: [639560] (in reverse order)
[2025-07-28 09:10:33] 2025-07-28 07:10:03,536 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 09:10:33] 2025-07-28 07:10:03,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 09:10:33] 2025-07-28 07:10:03,538 | INFO     | did not find any defunct processes belonging to 639560
[2025-07-28 09:10:33] 2025-07-28 07:10:03,539 | INFO     | did not find any defunct processes belonging to 639560
[2025-07-28 09:10:33] 2025-07-28 07:10:03,539 | INFO     | ready for new job
[2025-07-28 09:10:33] 2025-07-28 07:10:03,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | ***************************************
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | ***************************************
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | 
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | architecture information:
[2025-07-28 09:10:33] 2025-07-28 07:10:03,540 | INFO     | executing command: cat /etc/os-release
[2025-07-28 09:10:33] 2025-07-28 07:10:03,548 | INFO     | cat /etc/os-release:
[2025-07-28 09:10:33] NAME="CentOS Linux"
[2025-07-28 09:10:33] VERSION="7 (Core)"
[2025-07-28 09:10:33] ID="centos"
[2025-07-28 09:10:33] ID_LIKE="rhel fedora"
[2025-07-28 09:10:33] VERSION_ID="7"
[2025-07-28 09:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 09:10:33] ANSI_COLOR="0;31"
[2025-07-28 09:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 09:10:33] HOME_URL="https://www.centos.org/"
[2025-07-28 09:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 09:10:33] 
[2025-07-28 09:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 09:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 09:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 09:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 09:10:33] 
[2025-07-28 09:10:33] 2025-07-28 07:10:03,549 | INFO     | ***************************************
[2025-07-28 09:10:33] 2025-07-28 07:10:04,052 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 09:10:33] 2025-07-28 07:10:04,064 | INFO     | sufficient remaining disk space (229415845888 B)
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | INFO     | update_server=False
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 09:10:33] 2025-07-28 07:10:04,065 | INFO     | aborting loop
[2025-07-28 09:10:33] 2025-07-28 07:10:04,123 | INFO     | all data control threads have been joined
[2025-07-28 09:10:33] 2025-07-28 07:10:05,070 | INFO     | [job] retrieve thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,071 | INFO     | [job] queue monitor thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,071 | INFO     | [job] job monitor thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,115 | INFO     | all job control threads have been joined
[2025-07-28 09:10:33] 2025-07-28 07:10:05,128 | INFO     | [data] control thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,249 | INFO     | [data] copytool_in thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,279 | INFO     | all payload control threads have been joined
[2025-07-28 09:10:33] 2025-07-28 07:10:05,567 | INFO     | [payload] failed_post thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,819 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,868 | INFO     | [job] validate thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,907 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:05,911 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:06,071 | INFO     | [data] copytool_out thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:06,121 | INFO     | [job] control thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:06,285 | INFO     | [payload] control thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:06,351 | INFO     | [payload] validate_post thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:08,072 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:14,889 | INFO     | job.realtimelogging is not enabled
[2025-07-28 09:10:33] 2025-07-28 07:10:15,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 09:10:33] 2025-07-28 07:10:15,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993336547136)>', '<ExcThread(monitor, started 139992714180352)>']
[2025-07-28 09:10:33] 2025-07-28 07:10:20,969 | INFO     | all workflow threads have been joined
[2025-07-28 09:10:33] 2025-07-28 07:10:20,969 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 09:10:33] 2025-07-28 07:10:20,969 | INFO     | traces error code: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:20,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | INFO     | PID=633070 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 09:10:33] 2025-07-28 07:10:33,832 | INFO     | [monitor] control thread has ended
[2025-07-28 09:10:33] 2025-07-28 07:10:33,878 [wrapper] ==== pilot stdout END ====
[2025-07-28 09:10:33] 2025-07-28 07:10:33,880 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 09:10:33] 2025-07-28 07:10:33,882 [wrapper] pilotpid: 633070
[2025-07-28 09:10:33] 2025-07-28 07:10:33,884 [wrapper] Pilot exit status: 0
[2025-07-28 09:10:33] 2025-07-28 07:10:33,891 [wrapper] pandaids: 6746046671
[2025-07-28 09:10:33] 2025-07-28 07:10:33,907 [wrapper] cleanup supervisor_pilot  654068 633071
[2025-07-28 09:10:33] 2025-07-28 07:10:33,909 [wrapper] Test setup, not cleaning
[2025-07-28 09:10:33] 2025-07-28 07:10:33,912 [wrapper] apfmon messages muted
[2025-07-28 09:10:33] 2025-07-28 07:10:33,914 [wrapper] ==== wrapper stdout END ====
[2025-07-28 09:10:33] 2025-07-28 07:10:33,916 [wrapper] ==== wrapper stderr END ====
[2025-07-28 09:10:33]  *** Error codes and diagnostics ***
[2025-07-28 09:10:33]     "exeErrorCode": 0,
[2025-07-28 09:10:33]     "exeErrorDiag": "",
[2025-07-28 09:10:33]     "pilotErrorCode": 0,
[2025-07-28 09:10:33]     "pilotErrorDiag": "",
[2025-07-28 09:10:33]  *** Listing of results directory ***
[2025-07-28 09:10:33] total 401836
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc    530466 Jul 27 06:45 pilot3.tar.gz
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc      5112 Jul 27 06:59 queuedata.json
[2025-07-28 09:10:33] -rwx------ 1 boinc boinc     36292 Jul 27 07:00 runpilot2-wrapper.sh
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc       100 Jul 28 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 09:10:33] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 07:22 run_atlas
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc       105 Jul 28 07:22 job.xml
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc 237355493 Jul 28 07:22 EVNT.45758431._000005.pool.root.1
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc    542884 Jul 28 07:22 input.tar.gz
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc     15095 Jul 28 07:22 start_atlas.sh
[2025-07-28 09:10:33] drwxrwx--x 2 boinc boinc      4096 Jul 28 07:22 shared
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc         0 Jul 28 07:22 boinc_setup_complete
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc      6517 Jul 28 07:22 init_data.xml
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc         0 Jul 28 07:22 boinc_lockfile
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc      2563 Jul 28 07:22 pandaJob.out
[2025-07-28 09:10:33] -rw------- 1 boinc boinc    980125 Jul 28 07:22 agis_schedconf.cvmfs.json
[2025-07-28 09:10:33] -rw------- 1 boinc boinc   1593052 Jul 28 07:22 agis_ddmendpoints.agis.ALL.json
[2025-07-28 09:10:33] drwx------ 4 boinc boinc      4096 Jul 28 07:22 pilot3
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc       529 Jul 28 09:09 boinc_task_state.xml
[2025-07-28 09:10:33] -rw------- 1 boinc boinc 168542765 Jul 28 09:09 HITS.45758433._000103.pool.root.1
[2025-07-28 09:10:33] -rw------- 1 boinc boinc        95 Jul 28 09:09 pilot_heartbeat.json
[2025-07-28 09:10:33] -rw------- 1 boinc boinc      1021 Jul 28 09:09 memory_monitor_summary.json
[2025-07-28 09:10:33] -rw------- 1 boinc boinc    231870 Jul 28 09:09 log.45758433._000103.job.log.tgz.1
[2025-07-28 09:10:33] -rw------- 1 boinc boinc      7752 Jul 28 09:10 heartbeat.json
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc        27 Jul 28 09:10 wrapper_checkpoint.txt
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc      8192 Jul 28 09:10 boinc_mmap_file
[2025-07-28 09:10:33] -rw------- 1 boinc boinc       746 Jul 28 09:10 pilotlog.txt
[2025-07-28 09:10:33] -rw------- 1 boinc boinc    616305 Jul 28 09:10 log.45758433._000103.job.log.1
[2025-07-28 09:10:33] -rw------- 1 boinc boinc       357 Jul 28 09:10 output.list
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc       620 Jul 28 09:10 runtime_log
[2025-07-28 09:10:33] -rw------- 1 boinc boinc    870400 Jul 28 09:10 result.tar.gz
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc      8734 Jul 28 09:10 runtime_log.err
[2025-07-28 09:10:33] -rw------- 1 boinc boinc       659 Jul 28 09:10 lsONDmrf8z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvIULDmXk8tBn.diag
[2025-07-28 09:10:33] -rw-r--r-- 1 boinc boinc     21306 Jul 28 09:10 stderr.txt
[2025-07-28 09:10:33] HITS file was successfully produced:
[2025-07-28 09:10:33] -rw------- 1 boinc boinc 168542765 Jul 28 09:09 shared/HITS.pool.root.1
[2025-07-28 09:10:33]  *** Contents of shared directory: ***
[2025-07-28 09:10:33] total 397800
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc 237355493 Jul 28 07:22 ATLAS.root_0
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc    542884 Jul 28 07:22 input.tar.gz
[2025-07-28 09:10:33] -rw-r--r-- 2 boinc boinc     15095 Jul 28 07:22 start_atlas.sh
[2025-07-28 09:10:33] -rw------- 1 boinc boinc 168542765 Jul 28 09:09 HITS.pool.root.1
[2025-07-28 09:10:33] -rw------- 1 boinc boinc    870400 Jul 28 09:10 result.tar.gz
09:10:35 (629432): run_atlas exited; CPU time 18708.845451
09:10:35 (629432): called boinc_finish(0)

</stderr_txt>
]]>

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