Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:44:18 (5055): wrapper (7.7.26015): starting
12:44:18 (5055): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:44:18] Arguments: --nthreads 12
[2025-07-27 12:44:18] Threads: 12
[2025-07-27 12:44:18] Checking for CVMFS
[2025-07-27 12:44:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:44:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:44:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:44:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:44:19] 2.11.2.0 2947 112211 93980 148818 3 59 14550074 20275200 1 130560 0 38281463 99.971 9780948 9657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 12:44:19] CVMFS is ok
[2025-07-27 12:44:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:44:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:44:19] Further information can be found at the LHC@home message board.
[2025-07-27 12:44:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:44:19] Checking for apptainer binary...
[2025-07-27 12:44:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:44:19] Running /usr/bin/apptainer --version
[2025-07-27 12:44:19] apptainer version 1.3.2-1.el7
[2025-07-27 12:44:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:44:20] c-205-18.aglt2.org
[2025-07-27 12:44:20] apptainer works
[2025-07-27 12:44:20] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:44:20] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:44:20] Starting ATLAS job with PandaID=6747376374
[2025-07-27 12:44:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 14:07:50]  *** The last 200 lines of the pilot log: ***
[2025-07-27 14:07:50]  is_tar=False
[2025-07-27 14:07:50]  lfn=log.45743349._047609.job.log.tgz.1
[2025-07-27 14:07:50]  mtime=0
[2025-07-27 14:07:50]  protocol_id=None
[2025-07-27 14:07:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 14:07:50]  replicas=None
[2025-07-27 14:07:50]  scope=mc23_13p6TeV
[2025-07-27 14:07:50]  status=None
[2025-07-27 14:07:50]  status_code=0
[2025-07-27 14:07:50]  storage_token=
[2025-07-27 14:07:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747376374/log.45743349._047609.job.log.tgz.1
[2025-07-27 14:07:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/7f/log.45743349._047609.job.log.tgz.1
[2025-07-27 14:07:50]  workdir=None
[2025-07-27 14:07:50] ]
[2025-07-27 14:07:50] 2025-07-27 18:07:12,558 | INFO     | transferring file log.45743349._047609.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747376374/log.45743349._047609.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 14:07:50] 2025-07-27 18:07:12,558 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747376374/log.45743349._047609.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._047609.job
[2025-07-27 14:07:50] 2025-07-27 18:07:12,574 | INFO     | number of running child processes to parent process 15090: 1
[2025-07-27 14:07:50] 2025-07-27 18:07:12,575 | INFO     | maximum number of monitored processes: 6
[2025-07-27 14:07:50] 2025-07-27 18:07:12,580 | INFO     | adding to output.list: log.45743349._047609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/7f/log.45743349._047609.job.log.tg
[2025-07-27 14:07:50] 2025-07-27 18:07:12,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 14:07:50] 2025-07-27 18:07:12,581 | INFO     | summary of transferred files:
[2025-07-27 14:07:50] 2025-07-27 18:07:12,581 | INFO     |  -- lfn=log.45743349._047609.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 14:07:50] 2025-07-27 18:07:12,582 | INFO     | stage-out finished correctly
[2025-07-27 14:07:50] 2025-07-27 18:07:12,947 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 14:07:50] 2025-07-27 18:07:14,076 | INFO     | job 6747376374 has state=finished
[2025-07-27 14:07:50] 2025-07-27 18:07:14,076 | INFO     | preparing for final server update for job 6747376374 in state='finished'
[2025-07-27 14:07:50] 2025-07-27 18:07:14,077 | INFO     | this job has now completed (state=finished)
[2025-07-27 14:07:50] 2025-07-27 18:07:14,077 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 14:07:50] 2025-07-27 18:07:14,077 | INFO     | log transfer has been attempted: DONE
[2025-07-27 14:07:50] 2025-07-27 18:07:14,077 | INFO     | job 6747376374 has finished - writing final server update
[2025-07-27 14:07:50] 2025-07-27 18:07:14,078 | INFO     | total number of processed events: 400 (read)
[2025-07-27 14:07:50] 2025-07-27 18:07:14,079 | INFO     | executing command: lscpu
[2025-07-27 14:07:50] 2025-07-27 18:07:14,104 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 14:07:50] 2025-07-27 18:07:15,078 | INFO     | monitor loop #371: job 0:6747376374 is in state 'finished'
[2025-07-27 14:07:50] 2025-07-27 18:07:15,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:07:50] 2025-07-27 18:07:17,581 | INFO     | monitor loop #372: job 0:6747376374 is in state 'finished'
[2025-07-27 14:07:50] 2025-07-27 18:07:17,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,862 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 14:07:50] 2025-07-27 18:07:18,866 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-27 14:07:50] 2025-07-27 18:07:18,868 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747376374/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,869 | INFO     | extracted standard info from prmon json
[2025-07-27 14:07:50] 2025-07-27 18:07:18,869 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 14:07:50] 2025-07-27 18:07:18,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 14:07:50] 2025-07-27 18:07:18,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 14:07:50] 2025-07-27 18:07:18,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 14:07:50] 2025-07-27 18:07:18,871 | INFO     | fitting pss+swap vs Time
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | sum of deviations: -7948237292.000001
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | mean x: 1753637237.5
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | mean y: 2763348.8378378376
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | -- intersect: 110949955612.6235
[2025-07-27 14:07:50] 2025-07-27 18:07:18,872 | INFO     | intersect: 110949955612.6235
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | chi2: 0.08814648672318223
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | -- intersect: 110949955612.6235
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | current memory leak: -63.27 B/s (using 74 data points, chi2=0.09)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | ..............................
[2025-07-27 14:07:50] 2025-07-27 18:07:18,873 | INFO     | . Timing measurements:
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . get job = 0 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . initial setup = 3 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . payload setup = 9 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . stage-in = 0 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . payload execution = 4927 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . stage-out = 0 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | . log creation = 0 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,874 | INFO     | ..............................
[2025-07-27 14:07:50] 2025-07-27 18:07:18,958 | INFO     | 
[2025-07-27 14:07:50] 2025-07-27 18:07:18,958 | INFO     | job summary report
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | --------------------------------------------------
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | PanDA job id: 6747376374
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | task id: 45743349
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | errors: (none)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 14:07:50] 2025-07-27 18:07:18,959 | INFO     | pilot state: finished 
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | transexitcode: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | exeerrorcode: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | exeerrordiag: 
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | exitcode: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | exitmsg: OK
[2025-07-27 14:07:50] 2025-07-27 18:07:18,960 | INFO     | cpuconsumptiontime: 53077 s
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | nevents: 400
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | neventsw: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | pid: 15090
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | pgrp: 15090
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | corecount: 12
[2025-07-27 14:07:50] 2025-07-27 18:07:18,961 | INFO     | event service: False
[2025-07-27 14:07:50] 2025-07-27 18:07:18,962 | INFO     | sizes: {0: 2397474, 5: 2397736, 11: 2397792, 4941: 2424042, 4942: 2433096, 4948: 2433234}
[2025-07-27 14:07:50] 2025-07-27 18:07:18,962 | INFO     | --------------------------------------------------
[2025-07-27 14:07:50] 2025-07-27 18:07:18,962 | INFO     | 
[2025-07-27 14:07:50] 2025-07-27 18:07:18,962 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 14:07:50] 2025-07-27 18:07:18,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | job 6747376374 has completed (purged errors)
[2025-07-27 14:07:50] 2025-07-27 18:07:18,989 | INFO     | overall cleanup function is called
[2025-07-27 14:07:50] 2025-07-27 18:07:19,997 | INFO     | --- collectZombieJob: --- 10, [15090]
[2025-07-27 14:07:50] 2025-07-27 18:07:19,997 | INFO     | zombie collector waiting for pid 15090
[2025-07-27 14:07:50] 2025-07-27 18:07:19,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 14:07:50] 2025-07-27 18:07:19,997 | INFO     | collected zombie processes
[2025-07-27 14:07:50] 2025-07-27 18:07:19,997 | INFO     | will attempt to kill all subprocesses of pid=15090
[2025-07-27 14:07:50] 2025-07-27 18:07:20,087 | INFO     | process IDs to be killed: [15090] (in reverse order)
[2025-07-27 14:07:50] 2025-07-27 18:07:20,138 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 14:07:50] 2025-07-27 18:07:20,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 14:07:50] 2025-07-27 18:07:20,142 | INFO     | did not find any defunct processes belonging to 15090
[2025-07-27 14:07:50] 2025-07-27 18:07:20,146 | INFO     | did not find any defunct processes belonging to 15090
[2025-07-27 14:07:50] 2025-07-27 18:07:20,146 | INFO     | ready for new job
[2025-07-27 14:07:50] 2025-07-27 18:07:20,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 14:07:50] 2025-07-27 18:07:20,147 | INFO     | ***************************************
[2025-07-27 14:07:50] 2025-07-27 18:07:20,148 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 14:07:50] 2025-07-27 18:07:20,148 | INFO     | ***************************************
[2025-07-27 14:07:50] 2025-07-27 18:07:20,148 | INFO     | 
[2025-07-27 14:07:50] 2025-07-27 18:07:20,149 | INFO     | architecture information:
[2025-07-27 14:07:50] 2025-07-27 18:07:20,149 | INFO     | executing command: cat /etc/os-release
[2025-07-27 14:07:50] 2025-07-27 18:07:20,163 | INFO     | cat /etc/os-release:
[2025-07-27 14:07:50] NAME="CentOS Linux"
[2025-07-27 14:07:50] VERSION="7 (Core)"
[2025-07-27 14:07:50] ID="centos"
[2025-07-27 14:07:50] ID_LIKE="rhel fedora"
[2025-07-27 14:07:50] VERSION_ID="7"
[2025-07-27 14:07:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 14:07:50] ANSI_COLOR="0;31"
[2025-07-27 14:07:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 14:07:50] HOME_URL="https://www.centos.org/"
[2025-07-27 14:07:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 14:07:50] 
[2025-07-27 14:07:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 14:07:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 14:07:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 14:07:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 14:07:50] 
[2025-07-27 14:07:50] 2025-07-27 18:07:20,164 | INFO     | ***************************************
[2025-07-27 14:07:50] 2025-07-27 18:07:20,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 14:07:50] 2025-07-27 18:07:20,683 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-07-27 14:07:50] 2025-07-27 18:07:20,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 14:07:50] 2025-07-27 18:07:20,684 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 14:07:50] 2025-07-27 18:07:20,684 | INFO     | update_server=False
[2025-07-27 14:07:50] 2025-07-27 18:07:20,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 14:07:50] 2025-07-27 18:07:20,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:07:50] 2025-07-27 18:07:20,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 14:07:50] 2025-07-27 18:07:21,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 14:07:50] 2025-07-27 18:07:21,090 | INFO     | aborting loop
[2025-07-27 14:07:50] 2025-07-27 18:07:21,260 | INFO     | all data control threads have been joined
[2025-07-27 14:07:50] 2025-07-27 18:07:21,557 | INFO     | all payload control threads have been joined
[2025-07-27 14:07:50] 2025-07-27 18:07:21,689 | INFO     | [job] retrieve thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:21,690 | INFO     | [job] queue monitor thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:21,712 | INFO     | all job control threads have been joined
[2025-07-27 14:07:50] 2025-07-27 18:07:21,732 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:21,866 | INFO     | [data] copytool_in thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,095 | INFO     | [job] job monitor thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,266 | INFO     | [data] control thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,415 | INFO     | [payload] validate_post thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,419 | INFO     | [job] validate thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,559 | INFO     | [payload] control thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,690 | INFO     | [data] copytool_out thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:22,716 | INFO     | [job] control thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:23,022 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:23,044 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:23,152 | INFO     | [payload] failed_post thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:23,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 14:07:50] 2025-07-27 18:07:27,541 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:31,511 | INFO     | job.realtimelogging is not enabled
[2025-07-27 14:07:50] 2025-07-27 18:07:32,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 14:07:50] 2025-07-27 18:07:34,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973291927360)>', '<ExcThread(monitor, started 139972564735744)>']
[2025-07-27 14:07:50] 2025-07-27 18:07:39,186 | INFO     | all workflow threads have been joined
[2025-07-27 14:07:50] 2025-07-27 18:07:39,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 14:07:50] 2025-07-27 18:07:39,192 | INFO     | traces error code: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:39,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 14:07:50] 2025-07-27 18:07:50,225 | INFO     | PID=8646 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 14:07:50] 2025-07-27 18:07:50,225 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 14:07:50] 2025-07-27 18:07:50,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 14:07:50] 2025-07-27 18:07:50,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 14:07:50] 2025-07-27 18:07:50,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 14:07:50] 2025-07-27 18:07:50,226 | INFO     | [monitor] control thread has ended
[2025-07-27 14:07:50] 2025-07-27 18:07:50,308 [wrapper] ==== pilot stdout END ====
[2025-07-27 14:07:50] 2025-07-27 18:07:50,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 14:07:50] 2025-07-27 18:07:50,316 [wrapper] pilotpid: 8646
[2025-07-27 14:07:50] 2025-07-27 18:07:50,320 [wrapper] Pilot exit status: 0
[2025-07-27 14:07:50] 2025-07-27 18:07:50,338 [wrapper] pandaids: 6747376374
[2025-07-27 14:07:50] 2025-07-27 18:07:50,378 [wrapper] cleanup supervisor_pilot  8267 8647
[2025-07-27 14:07:50] 2025-07-27 18:07:50,382 [wrapper] Test setup, not cleaning
[2025-07-27 14:07:50] 2025-07-27 18:07:50,386 [wrapper] apfmon messages muted
[2025-07-27 14:07:50] 2025-07-27 18:07:50,390 [wrapper] ==== wrapper stdout END ====
[2025-07-27 14:07:50] 2025-07-27 18:07:50,394 [wrapper] ==== wrapper stderr END ====
[2025-07-27 14:07:50]  *** Error codes and diagnostics ***
[2025-07-27 14:07:50]     "exeErrorCode": 0,
[2025-07-27 14:07:50]     "exeErrorDiag": "",
[2025-07-27 14:07:50]     "pilotErrorCode": 0,
[2025-07-27 14:07:50]     "pilotErrorDiag": "",
[2025-07-27 14:07:50]  *** Listing of results directory ***
[2025-07-27 14:07:50] total 430692
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 07:10 pilot3.tar.gz
[2025-07-27 14:07:50] -rwx------ 1 boincer umatlas     36292 Jul 27 07:31 runpilot2-wrapper.sh
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 07:31 queuedata.json
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas       100 Jul 27 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 14:07:50] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 12:44 run_atlas
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas       105 Jul 27 12:44 job.xml
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas 227793437 Jul 27 12:44 EVNT.45743347._002643.pool.root.1
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:44 start_atlas.sh
[2025-07-27 14:07:50] drwxrwx--x 2 boincer umatlas      4096 Jul 27 12:44 shared
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas    542889 Jul 27 12:44 input.tar.gz
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas         0 Jul 27 12:44 boinc_lockfile
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 12:44 pandaJob.out
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas    980125 Jul 27 12:44 agis_schedconf.cvmfs.json
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas   1593052 Jul 27 12:44 agis_ddmendpoints.agis.ALL.json
[2025-07-27 14:07:50] drwx------ 4 boincer umatlas      4096 Jul 27 12:44 pilot3
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 14:01 init_data.xml
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas 207682775 Jul 27 14:06 HITS.45743349._047609.pool.root.1
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas       529 Jul 27 14:07 boinc_task_state.xml
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas      1046 Jul 27 14:07 memory_monitor_summary.json
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas    366235 Jul 27 14:07 log.45743349._047609.job.log.tgz.1
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas      7852 Jul 27 14:07 heartbeat.json
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 14:07 boinc_mmap_file
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas        27 Jul 27 14:07 wrapper_checkpoint.txt
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas        95 Jul 27 14:07 pilot_heartbeat.json
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas       744 Jul 27 14:07 pilotlog.txt
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas    471709 Jul 27 14:07 log.45743349._047609.job.log.1
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas       357 Jul 27 14:07 output.list
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas       620 Jul 27 14:07 runtime_log
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas    860160 Jul 27 14:07 result.tar.gz
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas       659 Jul 27 14:07 un9NDmNmE07n9Rq4apOajLDm4fhM0noT9bVof3QYDm0T2KDmztsyTo.diag
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 14:07 runtime_log.err
[2025-07-27 14:07:50] -rw-r--r-- 1 boincer umatlas     21507 Jul 27 14:07 stderr.txt
[2025-07-27 14:07:50] HITS file was successfully produced:
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas 207682775 Jul 27 14:06 shared/HITS.pool.root.1
[2025-07-27 14:07:50]  *** Contents of shared directory: ***
[2025-07-27 14:07:50] total 426664
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas 227793437 Jul 27 12:44 ATLAS.root_0
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 12:44 start_atlas.sh
[2025-07-27 14:07:50] -rw-r--r-- 2 boincer umatlas    542889 Jul 27 12:44 input.tar.gz
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas 207682775 Jul 27 14:06 HITS.pool.root.1
[2025-07-27 14:07:50] -rw------- 1 boincer umatlas    860160 Jul 27 14:07 result.tar.gz
14:07:51 (5055): run_atlas exited; CPU time 53049.448142
14:07:51 (5055): called boinc_finish(0)

</stderr_txt>
]]>

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