Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:48:59 (796841): wrapper (7.7.26015): starting
08:48:59 (796841): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 08:48:59] Arguments: --nthreads 4
[2025-07-28 08:48:59] Threads: 4
[2025-07-28 08:48:59] Checking for CVMFS
[2025-07-28 08:48:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 08:48:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 08:48:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 08:49:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 08:49:00] 2.9.2.0 3030 2506 91928 148839 3 57 36168962 36864001 0 130560 0 2087631 99.992 84561 1389 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 08:49:00] CVMFS is ok
[2025-07-28 08:49:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 08:49:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 08:49:00] Further information can be found at the LHC@home message board.
[2025-07-28 08:49:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 08:49:00] Checking for apptainer binary...
[2025-07-28 08:49:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 08:49:00] Running /usr/bin/apptainer --version
[2025-07-28 08:49:00] apptainer version 1.4.1-1.1
[2025-07-28 08:49:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 08:49:00] thA383a
[2025-07-28 08:49:00] apptainer works
[2025-07-28 08:49:00] Set ATHENA_PROC_NUMBER=4
[2025-07-28 08:49:00] Set ATHENA_CORE_NUMBER=4
[2025-07-28 08:49:00] Starting ATLAS job with PandaID=6747376243
[2025-07-28 08:49:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 10:13:42]  *** The last 200 lines of the pilot log: ***
[2025-07-28 10:13:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-28 10:13:42]  is_altstaged=None
[2025-07-28 10:13:42]  is_tar=False
[2025-07-28 10:13:42]  lfn=log.45743349._047478.job.log.tgz.1
[2025-07-28 10:13:42]  mtime=0
[2025-07-28 10:13:42]  protocol_id=None
[2025-07-28 10:13:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 10:13:42]  replicas=None
[2025-07-28 10:13:42]  scope=mc23_13p6TeV
[2025-07-28 10:13:42]  status=None
[2025-07-28 10:13:42]  status_code=0
[2025-07-28 10:13:42]  storage_token=
[2025-07-28 10:13:42]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747376243/log.45743349._047478.job.log.tgz.1
[2025-07-28 10:13:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/30/log.45743349._047478.job.log.tgz.1
[2025-07-28 10:13:42]  workdir=None
[2025-07-28 10:13:42] ]
[2025-07-28 10:13:42] 2025-07-28 08:13:04,714 | INFO     | transferring file log.45743349._047478.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747376243/log.45743349._047478.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 10:13:42] 2025-07-28 08:13:04,714 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747376243/log.45743349._047478.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0474
[2025-07-28 10:13:42] 2025-07-28 08:13:04,732 | INFO     | adding to output.list: log.45743349._047478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/30/log.45743349._047478.job.log.tg
[2025-07-28 10:13:42] 2025-07-28 08:13:04,733 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 10:13:42] 2025-07-28 08:13:04,733 | INFO     | summary of transferred files:
[2025-07-28 10:13:42] 2025-07-28 08:13:04,733 | INFO     |  -- lfn=log.45743349._047478.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 10:13:42] 2025-07-28 08:13:04,733 | INFO     | stage-out finished correctly
[2025-07-28 10:13:42] 2025-07-28 08:13:04,774 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 10:13:42] 2025-07-28 08:13:04,812 | INFO     | job 6747376243 has state=finished
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | preparing for final server update for job 6747376243 in state='finished'
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | this job has now completed (state=finished)
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | log transfer has been attempted: DONE
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | job 6747376243 has finished - writing final server update
[2025-07-28 10:13:42] 2025-07-28 08:13:04,813 | INFO     | total number of processed events: 400 (read)
[2025-07-28 10:13:42] 2025-07-28 08:13:04,814 | INFO     | executing command: lscpu
[2025-07-28 10:13:42] 2025-07-28 08:13:04,833 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 10:13:42] 2025-07-28 08:13:05,266 | INFO     | monitor loop #388: job 0:6747376243 is in state 'finished'
[2025-07-28 10:13:42] 2025-07-28 08:13:05,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:13:42] 2025-07-28 08:13:07,770 | INFO     | monitor loop #389: job 0:6747376243 is in state 'finished'
[2025-07-28 10:13:42] 2025-07-28 08:13:07,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,566 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 10:13:42] 2025-07-28 08:13:09,568 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3404.7093749999995
[2025-07-28 10:13:42] 2025-07-28 08:13:09,569 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747376243/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,569 | INFO     | extracted standard info from prmon json
[2025-07-28 10:13:42] 2025-07-28 08:13:09,569 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 10:13:42] 2025-07-28 08:13:09,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 10:13:42] 2025-07-28 08:13:09,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 10:13:42] 2025-07-28 08:13:09,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 10:13:42] 2025-07-28 08:13:09,570 | INFO     | fitting pss+swap vs Time
[2025-07-28 10:13:42] 2025-07-28 08:13:09,570 | INFO     | sum of square deviations: 136095575.0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | sum of deviations: -10669962802.999998
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | mean x: 1753687963.5
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | mean y: 2494691.052631579
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | -- intersect: 137492529459.73502
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | intersect: 137492529459.73502
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | chi2: 0.1032343190762916
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | -- intersect: 137492529459.73502
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | current memory leak: -78.40 B/s (using 76 data points, chi2=0.10)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | could have reported an average CPU frequency of 3649 MHz (6 samples)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | ..............................
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . Timing measurements:
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . get job = 0 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . initial setup = 1 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . payload setup = 5 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . stage-in = 0 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . payload execution = 5012 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . stage-out = 0 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | . log creation = 0 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,571 | INFO     | ..............................
[2025-07-28 10:13:42] 2025-07-28 08:13:09,612 | INFO     | 
[2025-07-28 10:13:42] 2025-07-28 08:13:09,612 | INFO     | job summary report
[2025-07-28 10:13:42] 2025-07-28 08:13:09,612 | INFO     | --------------------------------------------------
[2025-07-28 10:13:42] 2025-07-28 08:13:09,612 | INFO     | PanDA job id: 6747376243
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | task id: 45743349
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | errors: (none)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | pilot state: finished 
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | transexitcode: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | exeerrorcode: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | exeerrordiag: 
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | exitcode: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | exitmsg: OK
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | cpuconsumptiontime: 18805 s
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | nevents: 400
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | neventsw: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | pid: 807165
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | pgrp: 807165
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | corecount: 4
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | event service: False
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | sizes: {0: 2397478, 4: 2397740, 11: 2397768, 5021: 2424210, 5022: 2424209, 5023: 2433453, 5028: 2433591}
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | --------------------------------------------------
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | 
[2025-07-28 10:13:42] 2025-07-28 08:13:09,613 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 10:13:42] 2025-07-28 08:13:09,632 | INFO     | job 6747376243 has completed (purged errors)
[2025-07-28 10:13:42] 2025-07-28 08:13:09,633 | INFO     | overall cleanup function is called
[2025-07-28 10:13:42] 2025-07-28 08:13:10,134 | INFO     | PID=800554 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 10:13:42] 2025-07-28 08:13:10,640 | INFO     | --- collectZombieJob: --- 10, [807165]
[2025-07-28 10:13:42] 2025-07-28 08:13:10,640 | INFO     | zombie collector waiting for pid 807165
[2025-07-28 10:13:42] 2025-07-28 08:13:10,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 10:13:42] 2025-07-28 08:13:10,640 | INFO     | collected zombie processes
[2025-07-28 10:13:42] 2025-07-28 08:13:10,640 | INFO     | will attempt to kill all subprocesses of pid=807165
[2025-07-28 10:13:42] 2025-07-28 08:13:10,684 | INFO     | process IDs to be killed: [807165] (in reverse order)
[2025-07-28 10:13:42] 2025-07-28 08:13:10,717 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 10:13:42] 2025-07-28 08:13:10,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 10:13:42] 2025-07-28 08:13:10,719 | INFO     | did not find any defunct processes belonging to 807165
[2025-07-28 10:13:42] 2025-07-28 08:13:10,720 | INFO     | did not find any defunct processes belonging to 807165
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | ready for new job
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | ***************************************
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | ***************************************
[2025-07-28 10:13:42] 2025-07-28 08:13:10,721 | INFO     | 
[2025-07-28 10:13:42] 2025-07-28 08:13:10,722 | INFO     | architecture information:
[2025-07-28 10:13:42] 2025-07-28 08:13:10,722 | INFO     | executing command: cat /etc/os-release
[2025-07-28 10:13:42] 2025-07-28 08:13:10,736 | INFO     | cat /etc/os-release:
[2025-07-28 10:13:42] NAME="CentOS Linux"
[2025-07-28 10:13:42] VERSION="7 (Core)"
[2025-07-28 10:13:42] ID="centos"
[2025-07-28 10:13:42] ID_LIKE="rhel fedora"
[2025-07-28 10:13:42] VERSION_ID="7"
[2025-07-28 10:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 10:13:42] ANSI_COLOR="0;31"
[2025-07-28 10:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 10:13:42] HOME_URL="https://www.centos.org/"
[2025-07-28 10:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 10:13:42] 
[2025-07-28 10:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 10:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 10:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 10:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 10:13:42] 
[2025-07-28 10:13:42] 2025-07-28 08:13:10,736 | INFO     | ***************************************
[2025-07-28 10:13:42] 2025-07-28 08:13:11,239 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 10:13:42] 2025-07-28 08:13:11,256 | INFO     | sufficient remaining disk space (219176501248 B)
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | INFO     | update_server=False
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 10:13:42] 2025-07-28 08:13:11,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:13:42] 2025-07-28 08:13:11,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 10:13:42] 2025-07-28 08:13:11,279 | INFO     | aborting loop
[2025-07-28 10:13:42] 2025-07-28 08:13:11,515 | INFO     | all payload control threads have been joined
[2025-07-28 10:13:42] 2025-07-28 08:13:12,263 | INFO     | [job] retrieve thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,263 | INFO     | [job] queue monitor thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,285 | INFO     | [job] job monitor thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,324 | INFO     | all job control threads have been joined
[2025-07-28 10:13:42] 2025-07-28 08:13:12,342 | INFO     | all data control threads have been joined
[2025-07-28 10:13:42] 2025-07-28 08:13:12,521 | INFO     | [payload] control thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,555 | INFO     | [data] copytool_in thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,726 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,880 | INFO     | [job] validate thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:12,933 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,199 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,263 | INFO     | [data] copytool_out thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,330 | INFO     | [job] control thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,348 | INFO     | [data] control thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,555 | INFO     | [payload] failed_post thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:13,836 | INFO     | [payload] validate_post thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:15,264 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 10:13:42] 2025-07-28 08:13:16,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712551995200)>', '<ExcThread(monitor, started 140711181678336)>']
[2025-07-28 10:13:42] 2025-07-28 08:13:21,592 | INFO     | all workflow threads have been joined
[2025-07-28 10:13:42] 2025-07-28 08:13:21,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 10:13:42] 2025-07-28 08:13:21,593 | INFO     | traces error code: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:21,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 10:13:42] 2025-07-28 08:13:42,251 | INFO     | PID=800554 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 10:13:42] 2025-07-28 08:13:42,252 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 10:13:42] 2025-07-28 08:13:42,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 10:13:42] 2025-07-28 08:13:42,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 10:13:42] 2025-07-28 08:13:42,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 10:13:42] 2025-07-28 08:13:42,252 | INFO     | [monitor] control thread has ended
[2025-07-28 10:13:42] 2025-07-28 08:13:42,328 [wrapper] ==== pilot stdout END ====
[2025-07-28 10:13:42] 2025-07-28 08:13:42,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 10:13:42] 2025-07-28 08:13:42,337 [wrapper] pilotpid: 800554
[2025-07-28 10:13:42] 2025-07-28 08:13:42,341 [wrapper] Pilot exit status: 0
[2025-07-28 10:13:42] 2025-07-28 08:13:42,354 [wrapper] pandaids: 6747376243
[2025-07-28 10:13:42] 2025-07-28 08:13:42,376 [wrapper] cleanup supervisor_pilot  819507 800555
[2025-07-28 10:13:42] 2025-07-28 08:13:42,379 [wrapper] Test setup, not cleaning
[2025-07-28 10:13:42] 2025-07-28 08:13:42,383 [wrapper] apfmon messages muted
[2025-07-28 10:13:42] 2025-07-28 08:13:42,387 [wrapper] ==== wrapper stdout END ====
[2025-07-28 10:13:42] 2025-07-28 08:13:42,391 [wrapper] ==== wrapper stderr END ====
[2025-07-28 10:13:42]  *** Error codes and diagnostics ***
[2025-07-28 10:13:42]     "exeErrorCode": 0,
[2025-07-28 10:13:42]     "exeErrorDiag": "",
[2025-07-28 10:13:42]     "pilotErrorCode": 0,
[2025-07-28 10:13:42]     "pilotErrorDiag": "",
[2025-07-28 10:13:42]  *** Listing of results directory ***
[2025-07-28 10:13:42] total 435040
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc    530466 Jul 27 12:53 pilot3.tar.gz
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:04 queuedata.json
[2025-07-28 10:13:42] -rwx------ 1 boinc boinc     36292 Jul 27 13:05 runpilot2-wrapper.sh
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc       100 Jul 28 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 10:13:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 08:48 run_atlas
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc       105 Jul 28 08:48 job.xml
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc 228592989 Jul 28 08:48 EVNT.45743347._002638.pool.root.1
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc    542895 Jul 28 08:48 input.tar.gz
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:48 start_atlas.sh
[2025-07-28 10:13:42] drwxrwx--x 2 boinc boinc      4096 Jul 28 08:48 shared
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:48 boinc_setup_complete
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc      6380 Jul 28 08:48 init_data.xml
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc         0 Jul 28 08:48 boinc_lockfile
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc      2563 Jul 28 08:49 pandaJob.out
[2025-07-28 10:13:42] -rw------- 1 boinc boinc    978460 Jul 28 08:49 agis_schedconf.cvmfs.json
[2025-07-28 10:13:42] -rw------- 1 boinc boinc   1593052 Jul 28 08:49 agis_ddmendpoints.agis.ALL.json
[2025-07-28 10:13:42] drwx------ 4 boinc boinc      4096 Jul 28 08:49 pilot3
[2025-07-28 10:13:42] -rw------- 1 boinc boinc 211556381 Jul 28 10:12 HITS.45743349._047478.pool.root.1
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc       529 Jul 28 10:12 boinc_task_state.xml
[2025-07-28 10:13:42] -rw------- 1 boinc boinc      1037 Jul 28 10:13 memory_monitor_summary.json
[2025-07-28 10:13:42] -rw------- 1 boinc boinc    239996 Jul 28 10:13 log.45743349._047478.job.log.tgz.1
[2025-07-28 10:13:42] -rw------- 1 boinc boinc      7768 Jul 28 10:13 heartbeat.json
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc        27 Jul 28 10:13 wrapper_checkpoint.txt
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc      8192 Jul 28 10:13 boinc_mmap_file
[2025-07-28 10:13:42] -rw------- 1 boinc boinc       746 Jul 28 10:13 pilotlog.txt
[2025-07-28 10:13:42] -rw------- 1 boinc boinc        95 Jul 28 10:13 pilot_heartbeat.json
[2025-07-28 10:13:42] -rw------- 1 boinc boinc    489005 Jul 28 10:13 log.45743349._047478.job.log.1
[2025-07-28 10:13:42] -rw------- 1 boinc boinc       357 Jul 28 10:13 output.list
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc       620 Jul 28 10:13 runtime_log
[2025-07-28 10:13:42] -rw------- 1 boinc boinc    747520 Jul 28 10:13 result.tar.gz
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc      8739 Jul 28 10:13 runtime_log.err
[2025-07-28 10:13:42] -rw------- 1 boinc boinc       659 Jul 28 10:13 L9ELDmRNE07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo6ULDmIGLOTn.diag
[2025-07-28 10:13:42] -rw-r--r-- 1 boinc boinc     21551 Jul 28 10:13 stderr.txt
[2025-07-28 10:13:42] HITS file was successfully produced:
[2025-07-28 10:13:42] -rw------- 1 boinc boinc 211556381 Jul 28 10:12 shared/HITS.pool.root.1
[2025-07-28 10:13:42]  *** Contents of shared directory: ***
[2025-07-28 10:13:42] total 431124
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc 228592989 Jul 28 08:48 ATLAS.root_0
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc    542895 Jul 28 08:48 input.tar.gz
[2025-07-28 10:13:42] -rw-r--r-- 2 boinc boinc     15095 Jul 28 08:48 start_atlas.sh
[2025-07-28 10:13:42] -rw------- 1 boinc boinc 211556381 Jul 28 10:12 HITS.pool.root.1
[2025-07-28 10:13:42] -rw------- 1 boinc boinc    747520 Jul 28 10:13 result.tar.gz
10:13:43 (796841): run_atlas exited; CPU time 18819.063603
10:13:43 (796841): called boinc_finish(0)

</stderr_txt>
]]>

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